Os02g0598200

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0598200| Description = Transcriptional factor B3 family protein| Version = NM_001053865.1 GI:115447100 GeneID:4329874| Length = 7207 bp| D...")
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Gene Name

Os02g0598200

Description

Transcriptional factor B3 family protein

Version

NM_001053865.1 GI:115447100 GeneID:4329874

Length

7207 bp

Definition

Oryza sativa Japonica Group Os02g0598200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24112950..24120156

Sequence Coding Region

24113413..24113664,24115177..24115319,24115415..24115531,24115687..24117151,24118029..24119198

Expression

GEO Profiles:Os02g0598200

Genome Context

<gbrowseImage1> name=NC_008395:24112950..24120156 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24112950..24120156 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggtgctgttcgagggcagggatgcgtggggaggctcaggagcttcaacaaaacgaaaaagaagaaccggaactgcagtgatgacatgcgaaatggtgatgacgaagagaagaagtacagtcatcacgacatgaagaacaacttgcgaaatgatgccaacgaagagaagaggaagagcagcgatgacatgcgagatggtgatttcgaagagaagaagaagtgcagtcgtcacgacatgaagaagaacttgcgaaatgatgccaacgaagagaagaggaagagcagcgatgacatgcgagatggtgatgacgaagagaagaagtgcagtcgtcaagacatgaagaagaacctgcgaaatgatgccgacgaagagaagaggaagagcagtgatgacatgcgagatggtgatgacgaagagaagaagaagcgcagtcgtcatgacatgaagaagaactcgcgaaatgatgccgatgaagagaagaggaagaggaagaggaagtgcagtgatgacctgaagaagagtgtggtaaacgatgccagcaaagaggcgacgtcacacagtgactggagaaagaataggaaggctggaagcgatgctgagcaaagggggaagaagttgttgaatggcgacaagaaggctaagagtaggaaggtgaccactccattctttgaaaagatgcggaaaataaaaatgcagcgcacgagcaaccagaatggtgagaagaatatgaagagtgacggtgacagctataagaagacagtgccgctctcagtcaacaagggtaagatggagaaagatggaacgaacaagaggactttgtctaatacacttgttgcaaaggagaggaaaatgcgacctagtgacagtatggagatgaagatgaagaaaaagaagcgggatgcatcattcgttcaacctgatgagaggacagctcagacatttagcactaaaaacaaggaaaagaagaggaaggcgccatctacaccattgaagagggagcagaaggagcgagtggctagcagtgacaataaaaaggagacgaagaaggcttgtattgttgctataggaaatgagaaaaaaaattgtagggatggcaagaagaagaaaaggaaagcagccttcgcattcttcaaatttgtgcgcgacgagttcgaggaattactgttcataccaccagcagttgcacccagccttaaggatttaattgatcgccatgtatatcttgaagactcagaggggaagtgttcaaagatcaggctatcggtggtggatggttccctagctttttatgagggatggaacagtttcgtttcagaacattgtattaagtggggtgaatttctattatttgagtacacaccagaatcaacattttctgtgcgggtgtttggtattgattcttgtgaaagactacatttcagtgtcaaaagcggaggaaaaggtgctgtgaagaaaaggaaagaaaggcatacattatctgatgatttgatatcacattataatggtcagtatcaggactctgaagacatacacgatggccccaatgtttctggtgaatctcctaggagcaaagagcccaaaataacagttgatgctgagattggtaccaggaatctagttgctaaatctataaatgcagcttccgaaacacaagactctgaaagagttgaaagtgggattggatatggatccttaggggcactaggtaataaggttagaaatttaagcaatggggagtgtgatacaaggagtgactctgtgttctgtatccaagaaaaaacaagaagatctgaggttattataataagtgatgaagcttattcaacacaagtagacgaggataccatgaagcaaacagcaccaagtgaagcttcagaaatacatcatgtgactatcaatacacaaaaagaccttgaaagagttgtagatggtgtttgttgtgaatcctcagtagcactaaacaataagatgggaaatttgatccttggagagcccaaaaacaagaatatttcaccagcatgtagcacagaaaaaacaaatggatctgaaataactccaaccaccggtgtaattcctttaacacaagaaaatattgatacggtgaagttaaatacactttcttgcttcgaggaagacagaagcacaacaagagaatctgaacttgctgctgctattccaacaacatcagaaactcatgattcagataaagatttaggacagaaacatcaaaggaattccgttcaagtaaattctatcatagctgttgataaatatcctaatgatagtgagatgaatattagtggaaatattttcagaatatatgaagctccagcgggtactcggtgcttggagaagtggaaaaggggtattgtgaacggtcgagcagctcttgatgacattggacaggttagacctgaaaaaacacaaaaagctggagagaagttagttggtaattgtggtgcaatgggagaaagtccagttgatctacggatagagtctgatgttactgatacctgcctcaaaccaattctcaacatacctattgaagaactctcgattcttgatagcgtatcaatatccaaatgcggacgtagcaggacagaggtcaaccatttgttcaatcaaaaaggagctactgttcaactgcaaacaaaaaaggagccattgaaaccaactggtagcagcggaaatagaaagggggacaaaattgcagtgtctgtcaaccgtgtatttgctcatcaatcagaacttcagatcccccagcaggaaaatggaaattttaccagttgtgtaaccccagtggctctgctgcctgctaaggctgaactcctggatctggatgatcattcccttcaattctgcatcccttctaccattcagaaatggcttgagttgcccaaatcgcttccaatcacttgtcggcaaaaaggaaggtatgaccggaacgtcgtaatcctcaaggatcccatgaggaggctatggccggtcttctaccatgacaaaccggtcttcgtaggcttcaccgcgggctggaaaccttttgctgcagcaaacaacctccaggctggggatgtctgcaagtttgtgaaagagatggacgaagatgagcttgcgttccaggtttatatcacaagaaagtga</cdnaseq>

Protein Sequence

<aaseq>MDGAVRGQGCVGRLRSFNKTKKKNRNCSDDMRNGDDEEKKYSHH DMKNNLRNDANEEKRKSSDDMRDGDFEEKKKCSRHDMKKNLRNDANEEKRKSSDDMRD GDDEEKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADE EKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDAEQRGKKLLNGDKKAKSR KVTTPFFEKMRKIKMQRTSNQNGEKNMKSDGDSYKKTVPLSVNKGKMEKDGTNKRTLS NTLVAKERKMRPSDSMEMKMKKKKRDASFVQPDERTAQTFSTKNKEKKRKAPSTPLKR EQKERVASSDNKKETKKACIVAIGNEKKNCRDGKKKKRKAAFAFFKFVRDEFEELLFI PPAVAPSLKDLIDRHVYLEDSEGKCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFL LFEYTPESTFSVRVFGIDSCERLHFSVKSGGKGAVKKRKERHTLSDDLISHYNGQYQD SEDIHDGPNVSGESPRSKEPKITVDAEIGTRNLVAKSINAASETQDSERVESGIGYGS LGALGNKVRNLSNGECDTRSDSVFCIQEKTRRSEVIIISDEAYSTQVDEDTMKQTAPS EASEIHHVTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPKNKNISPACSTEKTN GSEITPTTGVIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSETHDSDKDL GQKHQRNSVQVNSIIAVDKYPNDSEMNISGNIFRIYEAPAGTRCLEKWKRGIVNGRAA LDDIGQVRPEKTQKAGEKLVGNCGAMGESPVDLRIESDVTDTCLKPILNIPIEELSIL DSVSISKCGRSRTEVNHLFNQKGATVQLQTKKEPLKPTGSSGNRKGDKIAVSVNRVFA HQSELQIPQQENGNFTSCVTPVALLPAKAELLDLDDHSLQFCIPSTIQKWLELPKSLP ITCRQKGRYDRNVVILKDPMRRLWPVFYHDKPVFVGFTAGWKPFAAANNLQAGDVCKF VKEMDEDELAFQVYITRK</aaseq>

Gene Sequence

<dnaseqindica>6493..6744#4838..4980#4626..4742#3006..4470#959..2128#gggagacggcttgccgcctcttctccttcccgctccgcgccatccacctccccctcctctccctcccctccgccgccgcctggcagcttccgcatcggggggaagcgcggtagcagcgctggtctgtccaactcgaggtggtgttatccccaagatcgagaaggtgcatttggggtggtgtttccgctcggagatggtcagagggacatcgacccggcaatactgtttctagaaccaaatgtaggtaaagttcaagctctgctcttgtgagttgtggctagaagatgattacaaggccctgtttagatctcaccctaaaatttttcaccctgtcacattgaaggtttaaacacatatatgaagtattaaatataggctaaaaaaataactaattgtatagactgcgactaatttgcgagatgaatcttttaagcctaattgctctatgatttgacaatgtggtactacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcggtttaccgatgaattctgtaattagttttttttattagtgtctgaacaccctatataatacccgatgtgacacgccaaaactttacacccctggatctaaacaccccctaagtttatttccttctatgctactccatctgttgcaaaatgtaaggagtgaaattaatgagagagatgaataaaatgagggatgactgagacgaggaagtaggttgagaggttattattacattttgggggtgaacttgagcagtatcgcacattgagttcgggtgacgcttttttctgttgcttcctgtcaataatgtagcctcatttttgtttttactgctgatttgatgctttctttggtccgctgtttgttccaggtgattggagagattcatcagtgattgctttagactagactgtactggggatttattggtgtttataaggatggatggtgctgttcgagggcagggatgcgtggggaggctcaggagcttcaacaaaacgaaaaagaagaaccggaactgcagtgatgacatgcgaaatggtgatgacgaagagaagaagtacagtcatcacgacatgaagaacaacttgcgaaatgatgccaacgaagagaagaggaagagcagcgatgacatgcgagatggtgatttcgaagagaagaagaagtgcagtcgtcacgacatgaagaagaacttgcgaaatgatgccaacgaagagaagaggaagagcagcgatgacatgcgagatggtgatgacgaagagaagaagtgcagtcgtcaagacatgaagaagaacctgcgaaatgatgccgacgaagagaagaggaagagcagtgatgacatgcgagatggtgatgacgaagagaagaagaagcgcagtcgtcatgacatgaagaagaactcgcgaaatgatgccgatgaagagaagaggaagaggaagaggaagtgcagtgatgacctgaagaagagtgtggtaaacgatgccagcaaagaggcgacgtcacacagtgactggagaaagaataggaaggctggaagcgatgctgagcaaagggggaagaagttgttgaatggcgacaagaaggctaagagtaggaaggtgaccactccattctttgaaaagatgcggaaaataaaaatgcagcgcacgagcaaccagaatggtgagaagaatatgaagagtgacggtgacagctataagaagacagtgccgctctcagtcaacaagggtaagatggagaaagatggaacgaacaagaggactttgtctaatacacttgttgcaaaggagaggaaaatgcgacctagtgacagtatggagatgaagatgaagaaaaagaagcgggatgcatcattcgttcaacctgatgagaggacagctcagacatttagcactaaaaacaaggaaaagaagaggaaggcgccatctacaccattgaagagggagcagaaggagcgagtggctagcagtgacaataaaaaggagacgaagaaggcttgtattgttgctataggaaatgagaaaaaaaattgtagggatggcaagaagaagaaaaggaaagcagccttcgcattcttcaaatttgtgcgcgacgagttcgaggaattactggtgtgtgcagatttctaattcctacacatacttgattatgtctgttgctcataagctcttctttaattagctatccatgaccttgagacttttatttgtgcttgaaacttggaaggtacttggaaattaatatcatctaatattatcggtcattggttaatttaaaggtgaccatatgctgtattcttctttctacaatcctgcctgccattgacaaccaggactaaatcaactacacagaggaatgatgaagaggccttgtacgaacagagtcagtttcaatttgaccttgtaaattattcagttacatcctttttaccattcttgaaaaggagccaagagcaagaggtgccagagtttataacatcgtgtggaggttttctctcatctttggagacttatgtacctctccagctctccttggagtggtacctcttgtaaccttcggagaatcagaaaaaaacccaatgaatgtatggcctgttctccgtagtgcatcgttatggtgctgtagtagccttttgctgccattgacatggccattaagcaactagtcatctttcttgttgcgaccataatgataaaaaaatattttggccgaaaggatcagataagcagttatgttttctttttctctctgtttacatggatgcatgaagtatccaactttctgtcttatttttaagttggcacctgcctcgctgcttaaatatctctccatagctctcaagcaccctaaaaagtctccgtaatttcagctctgttttttcttgttcattttagtgtcttttttgtcattgttttttcttcttgtactgtaccatgatgattatccttaaatattatatgcacataatgttgatttattcttgtgcagttcataccaccagcagttgcacccagccttaaggatttaattgatcgccatgtatatcttgaagactcagaggggaagtgttcaaagatcaggctatcggtggtggatggttccctagctttttatgagggatggaacagtttcgtttcagaacattgtattaagtggggtgaatttctattatttgagtacacaccagaatcaacattttctgtgcgggtgtttggtattgattcttgtgaaagactacatttcagtgtcaaaagcggaggaaaaggtgctgtgaagaaaaggaaagaaaggcatacattatctgatgatttgatatcacattataatggtcagtatcaggactctgaagacatacacgatggccccaatgtttctggtgaatctcctaggagcaaagagcccaaaataacagttgatgctgagattggtaccaggaatctagttgctaaatctataaatgcagcttccgaaacacaagactctgaaagagttgaaagtgggattggatatggatccttaggggcactaggtaataaggttagaaatttaagcaatggggagtgtgatacaaggagtgactctgtgttctgtatccaagaaaaaacaagaagatctgaggttattataataagtgatgaagcttattcaacacaagtagacgaggataccatgaagcaaacagcaccaagtgaagcttcagaaatacatcatgtgactatcaatacacaaaaagaccttgaaagagttgtagatggtgtttgttgtgaatcctcagtagcactaaacaataagatgggaaatttgatccttggagagcccaaaaacaagaatatttcaccagcatgtagcacagaaaaaacaaatggatctgaaataactccaaccaccggtgtaattcctttaacacaagaaaatattgatacggtgaagttaaatacactttcttgcttcgaggaagacagaagcacaacaagagaatctgaacttgctgctgctattccaacaacatcagaaactcatgattcagataaagatttaggacagaaacatcaaaggaattccgttcaagtaaattctatcatagctgttgataaatatcctaatgatagtgagatgaatattagtggaaatattttcagaatatatgaagctccagcgggtactcggtgcttggagaagtggaaaaggggtattgtgaacggtcgagcagctcttgatgacattggacaggttagacctgaaaaaacacaaaaagctggagagaagttagttggtaattgtggtgcaatgggagaaagtccagttgatctacggatagagtctgatgttactgatacctgcctcaaaccaattctcaacatacctattgaagaactctcgattcttgatagcgtatcaatatccaaatgcggacgtagcaggacagaggtcaaccatttgttcaatcaaaaaggtggaagggtgctacttctcataatacctatgatgtctgaaagcctgaaactatttttatttctcaaaagcctgaaactaacatttacaaagttagcttgtttagtttgaatataatttttatttacagcgtgtactgaattgtctatttggtaggagctactgttcaactgcaaacaaaaaaggagccattgaaaccaactggtagcagcggaaatagaaagggggacaaaattgcagtgtctgtcaaccgtgtatttgctcatcaatcaggtgaacttacctagtttatttcattgtaaaattaaggagaggctgaccaatttcattttgtgtttcttgttgggcactcaaattcacccatgcagaacttcagatcccccagcaggaaaatggaaattttaccagttgtgtaaccccagtggctctgctgcctgctaaggctgaactcctggatctggatgatcattcccttcaattctgcatcccttctaccattcagaaatggcttgtgagttgtttgtatcccatggacaatttcttttgcagctcgttagtattttattaaaacaagggcagaataatccatcatatctgctttcatggaatcaagggatagaaaaagaggacttttacggtactccctccattccaaaatataaggcataaccactcataactcaaagaccaagaaataattattatcatcttgtagtttggatcatcctaataaatacaatgcatgcatccaatagaattagaaaacatgagagtggatgatttaaaaaagtaataatttaatggagaagatgctatagttaattgcctacatgtatgcatgccttatattatagaacatttaacaaaagtggttgtgccttatattttggaatggagggagtacattgtactgcaagtatatactagcagtatatagaaaaaatgccacaccaagagtgaaaaataaggacttgcacttttggattgcgatggatctacccatctgcaacgtaaggtgtcgtggtccgagtccatgacgagcaaacaccgctggaggatagctgggtggtgttggctgctagccgctaggtatgaagggaggacttaggttgggatgaagaacattgagtcaatattaaagagtcgtataagttgtacagttgtattttcagaaataggtgcaagagttatataaggagtagagttctactttcaaatacaaacatgaattattaaaatattatctagcagtgcaaaaaaccatagaaatatagttttataaaatactgctaaacaattactccctccgtcccataatatagcaacctagtaccggatgggacattttatagtacaatgaatctggacaggaggatgtctagattcattgtactatgaaatgtcacatctggtactaggttcctcctgtccagattcattgtactatgaaatgtcacatccggtactaggttgctatattatgggacagaggaagtaataagttaattgccaagatgcaatcttagtggccatgtcagcagaaacccaatcatatatctctagattgtaatgcgccaccttatgcaattcgtgaaggttttcagctacagtgttgtgcaatggatgcaatttgttgagttcatgctgattgcagtgagggcggtgtgtttggattggaaacatctgtttattatctaggccacataaaaaagcatcactccagaatagctcattgctggttatgattgtattgttgaggcttgaattcgtgtgttttctatttgtcttaattcgttttaggccgctgtaaaagatacccctctactagtatcacagtaggtcagtagctacttgttcttgggcatactcatcaatctactaagatcacaataaggaattgatgcagcataaaactttagttttgacttacacttgcctataataacgctataaagctcctgacactgttgatgagtatggcaagcccattgacaactgctctttctttgctgtctttgttcaggagttgcccaaatcgcttccaatcacttgtcggcaaaaaggaaggtatgaccggaacgtcgtaatcctcaaggatcccatgaggaggctatggccggtcttctaccatgacaaaccggtcttcgtaggcttcaccgcgggctggaaaccttttgctgcagcaaacaacctccaggctggggatgtctgcaagtttgtgaaagagatggacgaagatgagcttgcgttccaggtttatatcacaagaaagtgatggcaagtgctctagctgggtgcaccatcttcagtagaacatggctgctctgctccctctgtaaatataatcttaggttggtttgcttttatgcaatgttcttgctgccatatttttcgttttatccatcagggaaattcttgcagctcacatgttcacatgactctgtgcaggcatcaggaactatggcttttcttttggttgcaacgacaacaatgtgctggctggccaccaggttgtgtgaaagccgcggttctaggcgccctccactactgacgagatgatggttctttttgggttggctgttgtgctgcatacttgtcctgaccaattggtgtaatgtatatatatagccttgccgtccaagacgacaagctgacaatattgtggacttcaacaatgcaaaggtcaaggcattgaacttgtgttgaatacttgaataagatgttggcactttggaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0598200, RefSeq:Os02g0598200