Os02g0598400

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0598400| Description = Lipovitellin, superhelical domain containing protein| Version = NM_001053867.1 GI:115447104 GeneID:4329876| Length =...")
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Gene Name

Os02g0598400

Description

Lipovitellin, superhelical domain containing protein

Version

NM_001053867.1 GI:115447104 GeneID:4329876

Length

7119 bp

Definition

Oryza sativa Japonica Group Os02g0598400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24130411..24137529

Sequence Coding Region

24134032..24134207,24134594..24134808,24134899..24134997,24135078..24135586,24135671..24136428
,24136522..24136720,24137158..24137313

Expression

GEO Profiles:Os02g0598400

Genome Context

<gbrowseImage1> name=NC_008395:24130411..24137529 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24130411..24137529 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttcccaattttggtttaatgtggttgaggctattagagaccagcattctgttgaaaggttggcggaagagatgttgcgccaacttgcatcacaacatacaagcgatgaggaggcatactggattctgtggactttgtttaatcagagcttcatgcacaaaactgtttttgagggcaatgtttgttgacaaatttttgcgttggaaaacattccctctatgttgtctgagatggattcttcactatgctgtctttgaattgccaccaaattcaggcatagaaacacagaagcaaaggacatcgagcttccttggtacactgcaaactttagtcagtgtttggtccaagaaagagtttgtccaggcatactcagtggagcaacaagcttacatcactgcagcaattgggttgtgtttggagaagatgtcaaaaagagaattagaaacaactaaagatgtattgaacaatattcttgaaggtgtaagctgtaggttagagagtccaattgatttaatccggaagatggccagtgctattgcattgacattttctaaagttgttgatccaaacaatcctctataccttgatgataactgttgtgagaatgttgagtgggactttggggttttatctccgaaggaaatcacagccccttcaaaggatgtagaacttataagcaaactgaaaccatctttgcctgagaacaagaaacatgctggtgagagaagggcaaaggctattaaacatgatacttcagagaacagggcaaaaatcattgagatcaaatcactagattcttgtgaaacgtctggttctgctgtgaatgggcatttcggagaggaagaatgtgatgaggaaataatgaacattgatgcctccagtgattcatccctggagccatatgatctgtcagacgatgactcagatttgcagaagaaattcacccaattaaaagatcttgctgctgcactacgaaaacctgatgatccagacggtgttgaaaacgctctgagttctgccgaaaagcttgtgagagcatcacctgatgaactacgccacaactcaggtgatcttgttagagcacttgtgcatgttcgatgttctgacgtggcaatggaaggagaggaagattctgctgaagaaaagagacagaaggcattagttgccttgctggtaacctgcacatttgaaccattagatgttctcaccaagttgctgtactcatcaagcgtggatgtaagtcagcgcattttgattattgatgttatgactgaggccgcacaggagcttgcggaaactaaaattgtaaggagagagctgcggcatggaaacttgatatccgacacctctccctcttggctagttcctagtgatcagggacctgctggtgcaggtccttggagggaagtctcagaatcaggaacacttctgaattggtcacaccggtatgaaagagaagttccatctagatctggtcaagttaaatcaggaaaatctcgtaaatggggtcttggaaaagctaaagatttgcagacagagtggtcaaaaaacagatttcctttatatgctgctgcttttatgctccctgttatgcaaggatatgataaaagatcacatggtgttgacttgctcaatcgggactttgttgtcctaggtaaattgatatacatgcttggtgtctgtatgaagtgcatggcaatgcatccagaagcatcagctgttgccccagctcttcttgatatgatcagatctagggctgtttcgcaacatcccgaagcatacgtcaggaggtctgtgttgtttgcagcttcttgcatactgatagcgctgcatccgtcgtatgttgcatcatctcttatagaaggaaatcaggatgtttctactggtttggaatggatacgcacatgggctcttcatgttgcagaaacagatcctgatacagaatgcacatcaatggctatgacctgcctgcggcttcattctgagatggcccttcagacatcacgagcactggaatcggcggatcacagcaaggccagcagcagcagcagcaggtcgctaccttctaagcttgataacatcatcataccatttgccaacatgatgtga</cdnaseq>

Protein Sequence

<aaseq>MFPNFGLMWLRLLETSILLKGWRKRCCANLHHNIQAMRRHTGFC GLCLIRASCTKLFLRAMFVDKFLRWKTFPLCCLRWILHYAVFELPPNSGIETQKQRTS SFLGTLQTLVSVWSKKEFVQAYSVEQQAYITAAIGLCLEKMSKRELETTKDVLNNILE GVSCRLESPIDLIRKMASAIALTFSKVVDPNNPLYLDDNCCENVEWDFGVLSPKEITA PSKDVELISKLKPSLPENKKHAGERRAKAIKHDTSENRAKIIEIKSLDSCETSGSAVN GHFGEEECDEEIMNIDASSDSSLEPYDLSDDDSDLQKKFTQLKDLAAALRKPDDPDGV ENALSSAEKLVRASPDELRHNSGDLVRALVHVRCSDVAMEGEEDSAEEKRQKALVALL VTCTFEPLDVLTKLLYSSSVDVSQRILIIDVMTEAAQELAETKIVRRELRHGNLISDT SPSWLVPSDQGPAGAGPWREVSESGTLLNWSHRYEREVPSRSGQVKSGKSRKWGLGKA KDLQTEWSKNRFPLYAAAFMLPVMQGYDKRSHGVDLLNRDFVVLGKLIYMLGVCMKCM AMHPEASAVAPALLDMIRSRAVSQHPEAYVRRSVLFAASCILIALHPSYVASSLIEGN QDVSTGLEWIRTWALHVAETDPDTECTSMAMTCLRLHSEMALQTSRALESADHSKASS SSSRSLPSKLDNIIIPFANMM</aaseq>

Gene Sequence

<dnaseqindica>3622..3797#4184..4398#4489..4587#4668..5176#5261..6018#6112..6310#6748..6903#aggttcgtcctgtgtttcccttcccccgccccccccccttcccatggcgagcaacccaagcagctccgcggcgggcggcggcggcgaccatggtggcgcgcgcctcgaagacctagcactggacaaggtggcggaggcggccgacgcggtcgccgccgcgtcgagcgccggcgaggtcgtccgcgcgatccacgccgtcgcggccatcgtcttccccgtcgactccgctaccgtagccggtgaggctccgaatcctaatccgacatgccccctattcccctttatctcattcgctgtcacttggggtgtctgatggcctctcttgtccgcgtgtgctctcctgtaggtaccgtggacgaacccttcaggagccaggtgaagctctgtgctaattctaggccttttatttcgtgcatctgagaaaaatgacttgtagttttatcattgctatttttggttctggcgcaaacaatgatgtgtgattgctaataatcatggaagggtagccggtgatctctacaatgcaagtcatggatggaatccacaagtcaggcgtttggggtgttgaatgctggctgttttgctgaatgtcttcggtttattttcatctttgagctgctgtagttaacatggctgtcatgttttgggtcaggccccatgggcttgtgtgatgtttagtttctttacttgctctgaaccttttgtaagaatcttatcatttcgttaatgaaatgggagggtctccgctctctgtctcaaaaaaaaaaaatcatggaaggggtctgtgataaaaaaaaaggaggtcttgagtttttgttttgacttgcaatcacttaggactgtatgccgaaatggagcattaaggtatcatagtgaacactattggttacatggacaatatttcagccactgtattgtcataattgcggtgcatatatttgaggaaattgatctctggaaggaattactccgaaactggattgataagcatccacaaaattttccaattgataagcatcaaattgataaacctatagctttaataatggtcacacaatgggtaatcaaattgcaggaccttgctaggtgagctgtagcagcatactccctccatactcacaaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagttgttgagtttgaaaatgtaaaaattatatgaatatatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaacaagaagttaaagttgtgttttggagaccgtgtcgctgtcctaaacgacttcctttacgagtatggagggagtacattttgtaaaacctgtgtcatttgataattcattcagaatacagaggatcaagtttcatgcttgagagataaattagtatggatattcaaagacacatgcttccttcaatatgattcagccaaatagccaattggagttccatccttttaggccatgatgtaacagggagaattattttctgtactttcagattattaatggtgtaagcctcagcagtgatgaacggggatcttggaggcatgctttttgccatggtccagcgtttcctactctatctaagattttgcttggccgtaagtttactcttgaatttgtcactgcaaacatacttgtaccattgatatttttttcatgtacaactctcccgtttgcttataatgttatctgccagctacaatctctacaagtcatacttcatttgtattgtttaccaatctctacaatttgattactatacgcttaaaacttcttgattgttcatcacagttaggccatttgcaaagttccttcagttataatcccattctcacactttggttgtccagatgttgccttgaagtggttacatcagattcgtgcctgtgcaaggaaggaaatctgtgattccttttttgtcaaaggatctccaactgaagtcattcaagctcttgttcctgctttgtctcataaagtaggctctaaggaagatcataacattatatgttcaaacattgaaagcttattaatgaacaatctatcaattctatttcattacacctgaatcttttattggtccaactttgtttgcttttcctataagtctatagcacatccttctttttgacaactccctgtgagttcacaacttcaaatattatacccaaaccttgtaggacaaattttcaagtttcaacacttcgactgcatgggtctgtactaatatcatgtatttgcccaatagtctgctttgtattcttaagtctattttatgctcgagtcattaggaatcaaacaatctagcatgcacacttcatctgaaaattcatgggcctgttcctatctggtatcttcctttttttttctcacctgataaccatatttgagcttagtttgtcattattttcccacatttcaggctgttaattctatgttttgtcgagaataagggggtcagccagattattgcagagtttactgtaagcagcaagcacgatgatcacaacttgaacccaggcagagcagctttgatttcaagggttgctcaactacttgcgtctgttccagataaaacaagaatgggagcttcacctgcactgacatcatcgtgtcctcacccccactgctccaaacacaaacatctttgttaattttttttcctttccttttattttgttagctttttctcagctaatacgtatttatttgcactatgtttgttcctccaaactgtaattccttgatggaaaccaaggtcattcttcaagtgtgctgtcgatcagcttcttgttgcaactgaacaagcggctatggagttggctgctgacgaagatgctaatgggctagatccctctaattctgtgttcctcttcgtgggtgaagtgatatctcgtgctagccgtcgtggatctactggtgagtattcatccttcaggatgtagcttgacgtgtgcagtgtgctattagtttatctgctttgacatttctatctactgatgggggcagttctagttggtgcaggaatggttttgcaatgcatttgtgtctggtaggattatagtgtattcaactcaacatttatgtttgcgatggtctgctctagggtgatggagcttatccttttttgtcctcatataatccttaatccttatgcaaactaattcaacacagtggtacacatttggttttctctgatggtccactaatagtcccttcagctgaaattttaaacatttaaggtagcctgtttttgggtttttatccagtgttcacttttggcaatcacagtagacttggggtctgcaatgcttgagatgtcacccaggatagcagtgcctcatgtcatggctgatcatcctagcacactgttctagtcattaacaacttcttgtttgtaatctatgtagccatccttttccctactatttgttgtatttctgataatatatcttgctcttttcaggcattttaggtgctgagctgattcctaggatccgtagtcacttaaagagatgtatggaatctgatcataaaaccataagtcctgacaagatcaagcatgtttcccaattttggtttaatgtggttgaggctattagagaccagcattctgttgaaaggttggcggaagagatgttgcgccaacttgcatcacaacatacaagcgatgaggaggcatactggattctgtggactttgtttaatcagagcttcatgcacaaaactgtttttgaggtgagaatgagatagtacatgtgcgcattttaatactatgcaacacttgacgtgcttgttttttagtttatccacattggttcatctgtgtctggcatgctacatttatctgtgaaggaaaaagtacttctgaggtttatttttttcagttagtggatgttttaggtaaggtgaatgatagtcttcagataccctgtatgtctttgttacttcattcctatgaacgacaaacagggtgccatgtatgtttacttaactttcagcatgggcttatattatgggtgtctattcagcgtataattggcatgcagcgattgatcaaataatcttcaacgtgtcttttcttttcttttctttcatcctttaattctctgtgctttcttcagggcaatgtttgttgacaaatttttgcgttggaaaacattccctctatgttgtctgagatggattcttcactatgctgtctttgaattgccaccaaattcaggcatagaaacacagaagcaaaggacatcgagcttccttggtacactgcaaactttagtcagtgtttggtccaagaaagagtttgtccaggcatactcagtggagcaacaagcttgtatcctttgaggcactcaaaactgtattacattacacactttttatttgcaaattatcatttgacttgttccccttaaacaacactcagacatcactgcagcaattgggttgtgtttggagaagatgtcaaaaagagaattagaaacaactaaagatgtattgaacaatattcttgaaggtgtaagctgtgagtatcccccccccaccccccctgcattagcttatcatattattattatggtaatactgaatgctcttttgctgtaggtaggttagagagtccaattgatttaatccggaagatggccagtgctattgcattgacattttctaaagttgttgatccaaacaatcctctataccttgatgataactgttgtgagaatgttgagtgggactttggggttttatctccgaaggaaatcacagccccttcaaaggatgtagaacttataagcaaactgaaaccatctttgcctgagaacaagaaacatgctggtgagagaagggcaaaggctattaaacatgatacttcagagaacagggcaaaaatcattgagatcaaatcactagattcttgtgaaacgtctggttctgctgtgaatgggcatttcggagaggaagaatgtgatgaggaaataatgaacattgatgcctccagtgattcatccctggagccatatgatctgtcagacgatgactcagatttgcagaagaaattcacccaattaaaagatcttgctgctgcactacgaaaacctgatgatccagacggtgtaagtttctatctagtgctacctgtactttccagagcaaattattgtaaaattctgatcatcctccctttttttttacccaaggttgaaaacgctctgagttctgccgaaaagcttgtgagagcatcacctgatgaactacgccacaactcaggtgatcttgttagagcacttgtgcatgttcgatgttctgacgtggcaatggaaggagaggaagattctgctgaagaaaagagacagaaggcattagttgccttgctggtaacctgcacatttgaaccattagatgttctcaccaagttgctgtactcatcaagcgtggatgtaagtcagcgcattttgattattgatgttatgactgaggccgcacaggagcttgcggaaactaaaattgtaaggagagagctgcggcatggaaacttgatatccgacacctctccctcttggctagttcctagtgatcagggacctgctggtgcaggtccttggagggaagtctcagaatcaggaacacttctgaattggtcacaccggtatgaaagagaagttccatctagatctggtcaagttaaatcaggaaaatctcgtaaatggggtcttggaaaagctaaagatttgcagacagagtggtcaaaaaacagatttcctttatatgctgctgcttttatgctccctgttatgcaaggatatgataaaagatcacatggtgttgacttgctcaatcgggactttgttgtcctaggtaaattgatatacatgcttggtgtctgtatgaagtgcatggcaatgcatccagaagcatcagctgttgccccagctcttcttgatatgatcagatctaggtatgccaagcctaaaacaagcatttccgtgttaaagactttcttagttataaccaagtggtacgattttgacattggattttgtttctgcagggctgtttcgcaacatcccgaagcatacgtcaggaggtctgtgttgtttgcagcttcttgcatactgatagcgctgcatccgtcgtatgttgcatcatctcttatagaaggaaatcaggatgtttctactggtttggaatggatacgcacatgggctcttcatgttgcagaaacagatcctgatacagaatgcacatcagtaagtactctggtctatatctgttatcgatcacttgttcgtgttttgttcgtcgacgtagagagcaattatggtataataggatgacatttgtttcttaaaaccacacacaataataataggtcattttttgacgaacaaaggagtacagttatgctggttttgtatcaaagtttgtctgcatcgcctaatcatttcagtaacctacccttatatgctttagttttctgtaacctactcatttctctcattccttcagtatacaaattcagtgacccagctcttttcagcaatttgtaacgaaaaacaggacatatttttacttataagctggaaaccagtttttacttaaaagagaccaattcagtataagctggaaactcagtaacttttcacactgtcatctaactcctcccattggcatgtttgtcttcaagatggctatgacctgcctgcggcttcattctgagatggcccttcagacatcacgagcactggaatcggcggatcacagcaaggccagcagcagcagcagcaggtcgctaccttctaagcttgataacatcatcataccatttgccaacatgatgtgatcgatgtactagattaagttgtaaataagcatatattatcttgccatgtaatattagaaattccaggtcagctaattctgattaggcttgatattgtcatattacagggttttttaatctgggatttgaaaatgctagaatttttgtcgattcgtgtggagattgtatggaagttgtcctgatccagattaaagagaattgatgaaaattgtaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0598400, RefSeq:Os02g0598400