Os02g0600400

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0600400| Description = Similar to Glucose-6-phosphate dehydrogenase| Version = NM_001053880.1 GI:115447130 GeneID:4329889| Length = 6492 bp...")
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Gene Name

Os02g0600400

Description

Similar to Glucose-6-phosphate dehydrogenase

Version

NM_001053880.1 GI:115447130 GeneID:4329889

Length

6492 bp

Definition

Oryza sativa Japonica Group Os02g0600400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24338182..24344673

Sequence Coding Region

24339237..24339419,24339668..24339753,24339910..24339958,24340028..24340214,24340682..24340839
,24340915..24340983,24341160..24341218,24341608..24341644,24341961..24342032
,24342162..24342309,24342592..24342687,24343579..24343649,24343772..24343887
,24344082..24344127,24344215..24344391

Expression

GEO Profiles:Os02g0600400

Genome Context

<gbrowseImage1> name=NC_008395:24338182..24344673 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24338182..24344673 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggaggatctggtgattcttccccttcatcagggcgggctagcttcagttctttgtcaggtttgaaggacctagaactgtcttcagagtctggttgcttgtccattgtggtcctaggtgcttctggagaccttgctaagaagaaaacattcccagcgctgtttcacctctttcagcagggatttctacaatctggagaagtccatatatttgggtatgcaagatcaaatatttcggatgatggattaagagaacgcattcgtggatacctcaaaggagcttcagatgaacatatttcacaatttttgcaattaattaaatatgttagtggttcctacaatagcggggaaggatttgcatcattaaataacgccatttcagagaatgaaacttcgaagaacaacaaaccaggaagctcacgtagactattttatttggcattgcctccatcagtctacccctcagtatgcaaaatgataagatcatactgcatgaatccatcttctcattctggctggacaagggttattgttgaaaagccctttgggaaggacttggagtctgcagaggaactcagtgcccagcttggagagctgtttaatgaacaacagctgtacagaattgaccactatttaggaaaagaattggtccaaaatctgcttgtgcttcgctttgcaaaccgtttgttcctacctctttggaatcgtgataacattgctaatgtacagattgtattcagagaggactttgggactgaaggacgtggagggtactttgatcaatatggcatcattcgtgatatcattcagaaccatttgttgcaggtcttctgtttggtggctatggaaaagcctgtctctcttaagcctgagcacataagagatgaaaaagtcaaggttcttcagtcagtgacacctataaagcatgatgaggtggtccttgggcaatatgatggctacaaggatgactctacggtaccagatgactccaacacacctacttttgcatctcttgtattgagggtaaacaatgaaagatgggaaggagttcctttcattctcaaggctggcaaagcactgaacaataggaaagcagagatacgtgtgcagttcaaggatgctcctggtgacatttttaaatgcaagaagcaaggaaggaatgaattcgttatacggttgcagccatcggaagccatgtatatgaaattaactgtcaagaaacccggactagaaatggcaaccgaacaaagcgagctggatctgtcatatgggctacgctaccaagacgtgaagatcccagaagcgtatgaacgcctcatcctggatacgataagaggggatcagcagcactttgttcgccgagacgaactgaaggctgcgtgggagatcttcactccgctgctgcacgacatcgacgacggcaaggtgaaggccctgccgtacaagccgggaacccggggacccccagaggccgacgagctgagcaagaggatgggctacgtgcagacccatggctacgtttggatacctccaaccctttcaaaattctag</cdnaseq>

Protein Sequence

<aaseq>MSGGSGDSSPSSGRASFSSLSGLKDLELSSESGCLSIVVLGASG DLAKKKTFPALFHLFQQGFLQSGEVHIFGYARSNISDDGLRERIRGYLKGASDEHISQ FLQLIKYVSGSYNSGEGFASLNNAISENETSKNNKPGSSRRLFYLALPPSVYPSVCKM IRSYCMNPSSHSGWTRVIVEKPFGKDLESAEELSAQLGELFNEQQLYRIDHYLGKELV QNLLVLRFANRLFLPLWNRDNIANVQIVFREDFGTEGRGGYFDQYGIIRDIIQNHLLQ VFCLVAMEKPVSLKPEHIRDEKVKVLQSVTPIKHDEVVLGQYDGYKDDSTVPDDSNTP TFASLVLRVNNERWEGVPFILKAGKALNNRKAEIRVQFKDAPGDIFKCKKQGRNEFVI RLQPSEAMYMKLTVKKPGLEMATEQSELDLSYGLRYQDVKIPEAYERLILDTIRGDQQ HFVRRDELKAAWEIFTPLLHDIDDGKVKALPYKPGTRGPPEADELSKRMGYVQTHGYV WIPPTLSKF</aaseq>

Gene Sequence

<dnaseqindica>1056..1238#1487..1572#1729..1777#1847..2033#2501..2658#2734..2802#2979..3037#3427..3463#3780..3851#3981..4128#4411..4506#5398..5468#5591..5706#5901..5946#6034..6210#ggtggatggaaagcgggtgtgagtgaggaagatccccctataaatcgcacccggaaaagatcaccatccattgcccaattcgccgtcgtcgtcttcttcttccacctcgggaagtcaaatctcgtcgccactgctggttagtctccctcctcctcctcatccacactgcttagattcctctttggtggttgatcggttccgtagcagagttctgcgcgatcggtttttccattgctgatttcatttgccgtggaagggattgtgctacgctgcggccttaggatctcatcgcagccttcgcaggcaaattcctctgttctgtgcgccgtgtttgtgttcatgatctctgtgtttattctgcgtgtgctcctcgatttcctggcgccctgatgcgcttgctgtataggttcgttttaatcatttgaagctctcggaacagaatttgctttgcaagttgcagttctagtttatttcgggattattgggtggttgggctgttgtgtgttctagacttctagtgagtgcagtggttcagttgttgcatgtgttccagtttacccgtacaaaatgtaggggcaccgagttcaattgatttacatttgtagtcttgtagatacttttttttttctgtattagaatctcatagaagcatttgactagcataactacagtacctgtttgtgttttatgagaactttgactataagttggcaaacaatgggagtagttcgctgatgtaagttcagggtagctatattagtagtttagtactgatttcatgaaaccaactttaatcccattcattttgattttttttttctgaagcaaacattcattttgatttacactctgttgcaaattggctgttaggtactgacaggtgattcagttcaagaatccatcattcaaccaatagacctttttgttcatattagcatagattaaagttttggatagattataagttatttgtgaatacctcatattgagactaacagtacttttttttacattcttaggttttgtctccaaaggaagagaccatacagttcatcatgtcaggaggatctggtgattcttccccttcatcagggcgggctagcttcagttctttgtcaggtttgaaggacctagaactgtcttcagagtctggttgcttgtccattgtggtcctaggtgcttctggagaccttgctaagaagaaaacattcccagcgctgtttcacctctttcagcaggtaatttgattgtaactagtagcttcttacatagtttggtatactagcttcttccatagttgtcaaacttctgaaagagttgtagtgaaaaagaaataaaattgatgcattcgtgatgagttataattgctcagaaattctactgcagcactttataatgctatattgctattgcatgccatgtacataatgttttgtcaggttgacacacgtacaaagttctgaactgtaacctttggtgttgatagggatttctacaatctggagaagtccatatatttgggtatgcaagatcaaatatttcggatgatggattaagagaacgcattcgtgggtaagaaagatacatattagcaccaacatttaccataaaataatttaagaatttcatgtaaaaataaattgggatgttctgtatgaggaagtagtttctctgtttttaagtctgatgatatactagtgcctaaatagcattctcctgttatcgcagatacctcaaaggagcttcagatgaacatatttcacaatttttgcaattagtaagtcactgatatcatgaatagcttctttgcatttagatttcgtaacacgttgaattttctttgcagattaaatatgttagtggttcctacaatagcggggaaggatttgcatcattaaataacgccatttcagagaatgaaacttcgaagaacaacaaaccaggaagctcacgtagactattttatttggcattgcctccatcagtctacccctcagtatgcaaaatgataagatcatactgcatgaatccatgtgagtacttccccttttttacggattttgaaagctgctgcacttcctttggtgtagtgaagttatccacaacagagtttcaaaatataggaaatatatttggttgtatccactcttgtttgtactattttccttttgtcctctttatttaactaagtatttgccttgtggaactttgctactatttcaactttctaagcataccaattcctagcagtcgccgactcttttcctgacattgctttttcattgggacttttgaaacataaagttttggttttctggaagcaatttgggtgcaatgaatttgctcttagttattaattgagtcatgtgttggttcatagtaaattaaaaatcaaattaattatttttaagtttgatttttagaagttgtgctatactatgttgtagtttcatttcttttatgctagtcaccttctgtaactgtcatattgtgctttcagcttctcattctggctggacaagggttattgttgaaaagccctttgggaaggacttggagtctgcagaggaactcagtgcccagcttggagagctgtttaatgaacaacagctgtacagaattgaccactatttaggaaaagaattggtccaaaatctggtaagttgtatggcttcgtctagttagttgaacgatatattccatgctactataacatatttcaatatatttcagcttgtgcttcgctttgcaaaccgtttgttcctacctctttggaatcgtgataacattgctaatgtacaggtaatatgcttttctatgtagtcctttgtatttttatttgtcaactgtagttacatctatgacatcctctgttattggtataaagttgaatggattagttttggaaattctggaaagttttatcattatcatggtgcgaacaacatgtgcttgaacataataaatatatgctgcagattgtattcagagaggactttgggactgaaggacgtggagggtactttgatcaatatgggtatgttgggagtaactttattttgcatgaaagttccttttactgaaagtattttgttgtaagcacatatgcttgtgactgtggatatactataaaagtgtaaaatcactttgatatattgtaaatggtttatggttcccatagttcacatgaagtcattcgatcgtgtacagttgtccattagaaatatacaaattgcattttattattttcttctaggcattaaacttctttagtttttatgataatacagtatttgctagatttaaaataaatcaactgcattatggtgtttatgttatgagacaaataatcacctagaggacctcccgtgcatcgttattcgtcttcgctgatgtaaatatttgacctcgcttttgttgctgcagcatcattcgtgatatcattcagaaccatttgttgcaggtaaatatatttatttttggtatgcagcatagttttccatgcacttgccttttctaggggagttttatgtgcactttcacttcccaatgtgaatctacattagcatttgcttactgtggtctgtggggactgctgaacattttacttgaccattcagaatgattggtgctttattccatcaccattcttatgttataccacgaggaggcagagcagcaacctgtcatgcattataattcctcaaaagagaatattgctgtttccactttcacgacttgaggccccctttctgtattgatttcgctcttgtctgcaggtcttctgtttggtggctatggaaaagcctgtctctcttaagcctgagcacataagagatgaaaaagtcaaggtttttgcttctccttatacaattctactctaactgaaagtaggaaacctgtatggatctttttttttttttttgtcatccttcgttgcttacaatacttccttctgcgtttttataccacaatgtcaggttcttcagtcagtgacacctataaagcatgatgaggtggtccttgggcaatatgatggctacaaggatgactctacggtaccagatgactccaacacacctacttttgcatctcttgtattgagggtaaacaatgaaagatgggaaggtatatgttacaccttacaacatacagatatacagtattttgaagtcacttttaaacaaatatctgcattttccaactgaactgccttttttcgatacaagagtttcagctgttctgcatcactttgatcaaacatgggcatttggttccaagatttccattttccatatgcctacattgtcctagaaaaaatgaagctgcattgacatctatttctgaccctccagttaccattatcttatctttcagtgcagttaacatagtaataatcgtgcgctgcaggagttcctttcattctcaaggctggcaaagcactgaacaataggaaagcagagatacgtgtgcagttcaaggatgctcctggtgacatttttaaatgtatgcgctaaacaccttctcgtatccaaatgtgctgtgaaacttgtcatcaagtctgatcttgcaaaagtcacaacctattttaagaaactaagttatttgatttagaatatctgaatgctagtccaaaacaaactgaaaaatctgaatatctctgtcaagagttaatggataacggcagacaactctattggaaatataagatgttgcattatgcaagcactaaagagagtactaaacattccttcttgataatactgagaaataatgtaaaaatgtgctagtgctttggtatgaaaaagttacttcttataatgggttatgatgtgacaccttagtataagcaacacttcctttagaaaatagacaagaataagcatgagacggtttgctactttgctacattttagtatctaaaattgctataagctccctactttcaatttgacctgagtaccttactattggtttttgccgggtcaccttactaattggttgagtcactgtttctatgacttatgttgaccctgcttgtcagcctgtttgtgtttaatagatttggaagtgagctgtcattttcttattggtaataatactgtccaaaagacctggtatgaagtaaaaacttgttctgtttaactccttcagataactaattattgttttctataggcgcaagaatctggcagtaagttaaaatgtgtgcgtgtgtggtacctttacatgataacaaaacgtatttttgtctcatgagcagactagagaaatttcacataactgtgaatgtagttaaacatccgtaacctatttgaatcaatacagttctgtctgctattgttttgcttctgccaatggtgtctaaaactctgtttttatttcaccctgataaaggcaagaagcaaggaaggaatgaattcgttatacggttgcagccatcggaagccatgtatatgaaattaactgtatgtacaacttctgtaaacccatttatctgaagatatgtcagaattgtctattcatctttgcctgaagagaactccaaaaaaacaagtgttgtctgaacaaagtgcatgaactgttgcaggtcaagaaacccggactagaaatggcaaccgaacaaagcgagctggatctgtcatatgggctacgctaccaagacgtgaagatcccagaagcgtatgaacgcctcatcctggatacgtacgtcctgttccatccttcttcccccatttctttctgctacactaataacttcttcacttgcattgcgccttgttcccaacacatgccatatccaagatgaactatccgtgttggatgtagaggccgggtttttaatccattatatatatataaaggatgaaccatgatatcatcttccatttttttgacaggataagaggggatcagcagcactttgttcgccgagacgaactgaaggtttgtgctttgtgtaattgacgctgtgtgacttgcaatcggctcgcttgtgactgaatgaatacctgacgccgtgttggttttcaggctgcgtgggagatcttcactccgctgctgcacgacatcgacgacggcaaggtgaaggccctgccgtacaagccgggaacccggggacccccagaggccgacgagctgagcaagaggatgggctacgtgcagacccatggctacgtttggatacctccaaccctttcaaaattctagccgctatgtaccaatgcaggctctgtctagatgccggtttatcaggagctttgtaatattttttttaaaagaactcctactacttcgcctgtctagaacactgtaatgttggtgatcttggaataaaaagaagactatatatgctgcaagtaagcaagttacacatgttgtggttagagttggacctgttatgagtttgccacaagcaactatattataggggctactataccatggatcttgttcagacaggatgatatctataaagtatcagactctggt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0600400, RefSeq:Os02g0600400