Os02g0601800

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0601800| Description = Bromodomain containing protein| Version = NM_001053888.1 GI:115447146 GeneID:4329897| Length = 5206 bp| Definition ...")
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Gene Name

Os02g0601800

Description

Bromodomain containing protein

Version

NM_001053888.1 GI:115447146 GeneID:4329897

Length

5206 bp

Definition

Oryza sativa Japonica Group Os02g0601800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24407036..24412241

Sequence Coding Region

24407680..24407943,24408022..24408143,24408227..24408269,24408356..24408468,24408567..24408626
,24408940..24409009,24409355..24409419,24410016..24410153,24410232..24411501

Expression

GEO Profiles:Os02g0601800

Genome Context

<gbrowseImage1> name=NC_008395:24407036..24412241 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24407036..24412241 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaccgacggtcctcatggagtttgggcagcagaggcagattaagcggggctacgatgaaatggcgttccggggcatggcgtcagcggcgccacggggttacgcggagaccgttggcgagtcggagggcgcggcaggcagccccgttcgtgttgactccgaggactcttcggcccccaagcgcaagtgcatcagcctaaacagcgacggcttcgatgtcaagcgggagattttcgtcccagccaagatgtcctcctccgagaggaggcatctccggaagaggttccgcacagagcttgattcggtccggaatctcctcaagaagccggagtttgctgtccctgtccctgtcaatagagctcccgcgctctcgtcctcggctgcccctcgaggtaagaagggacagcgtggtaaccatgtggtccgtggtgccaaggggcgtttcttgcctacaaagccccgacctgaggcttccacggtgttgactgaggatgcgatttttaagcaatgcgatgctattctgaaaaagctgatgactcagaaatgtagtaacatattcgactccccggttgatgctgttaagctgaatattccagattattttcaaatcatcaagaaaccgatggatcttggaactatcaggaataagcttgactctggttcctacacgagtccatctgaatttgcagccgatgtacggctgaccttttcaaatgcgatgacttacaatcctcgtgggcatgtagtgcatgattatgccattcaactaaacaagatgtttgaatcaagatggaggacaattgaaaagaagctggcttccattgccacagaggcgcacgtcgaggttgacagggctgactcaaagaggaggaagactccccctgtggactgcagtgaggtgtcaacagagtgtgtgaggccaacagagtctgttagaccaacagagtctgtaaagccaaaaatgacattcgaggagaaagaatcatttgggaactgtttggcatctttgtctgaggatccggaggtaccttcacacatcattgatttgttgcagcaatgcattgacaacaacacagatcagcttggtgatggagagatagagattgatatccatgctgtcagtgatgacctactattcgagttgaagaaacatgttgacaagtatttgcaagagagagagcagagccagcaggcaaaatctgagccttctgagaatgaggctgctaatgtatctggccttagccactcctctacaaatccctgcaaaggtggtgatccagttgaggaggatgtagatatttgcgggaatgcatcccctatattgatagaaaaagatgcacacaacaatcctaacaagtgtggtagcccaagtagttccagcagtgactctggatcttcttccagcgattctgagtcgggcagtgacagtgaaagcgaacaagaaaaaggtggtagcccaggaaagccgaagggaagtaagagatctgaacaactggtggagcaagaaaagagtgatgttataagtccagtcgatgccatccgtcctgctgatgatgtggagctccgtgagcaggataacgagtcaaagcctgccccagagggggagaattcaaaacccgacaggcaagtctccccagacaagctcttaagagcagccctccttaggagtcgttatgctgatgtgattgttaaggcacaggggattctcagccagggtggagacaaacaggaggagctggaaaagctccagaaggaagagaaagcaaggctgttggctgaaggaaatgcagctatggaagctcgaagagctgaagctgaagctgaagccaagcgtaaacgggaccttgagagggagaaagctcgccaggccctgcaggagatggagagaacggtggaaatcaatgacaacctccatctaaaggatttggaaatgcttggaacggcaaccacagaacatattgtgagttctgttgatgagactagtcctgagcattcccaggatggcatgcccagttttcttcctggatcaggcaatccattggaacagctgggactcttcatgaaagcagatgaggaggaagaggaagaagatcctagcagtgtccccagcactaaagatgcagaggaaggagagatcaactag</cdnaseq>

Protein Sequence

<aaseq>MTPTVLMEFGQQRQIKRGYDEMAFRGMASAAPRGYAETVGESEG AAGSPVRVDSEDSSAPKRKCISLNSDGFDVKREIFVPAKMSSSERRHLRKRFRTELDS VRNLLKKPEFAVPVPVNRAPALSSSAAPRGKKGQRGNHVVRGAKGRFLPTKPRPEAST VLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL DSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIA TEAHVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVKPKMTFEEKESFGNCL ASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQE REQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDICGNASPILIEKDAHNN PNKCGSPSSSSSDSGSSSSDSESGSDSESEQEKGGSPGKPKGSKRSEQLVEQEKSDVI SPVDAIRPADDVELREQDNESKPAPEGENSKPDRQVSPDKLLRAALLRSRYADVIVKA QGILSQGGDKQEELEKLQKEEKARLLAEGNAAMEARRAEAEAEAKRKRDLEREKARQA LQEMERTVEINDNLHLKDLEMLGTATTEHIVSSVDETSPEHSQDGMPSFLPGSGNPLE QLGLFMKADEEEEEEDPSSVPSTKDAEEGEIN</aaseq>

Gene Sequence

<dnaseqindica>4299..4562#4099..4220#3973..4015#3774..3886#3616..3675#3233..3302#2823..2887#2089..2226#741..2010#gcgcgtcacagtctcgcatcgcttcgcttcccagtttcgggtctctcgcttcccccgcgcggatctccacttcggctctccccggctcggctcggctccctccacctcggctcggctcaagtcgagtcgcttcgcgaaggaaaaggataagcaggagacggctcgactcgagaggaggaaaaagaaaagagaagaaaaaagagaaaaaaaaaagaggataaggcggggaggcgtctcgagccggcggccacctcgcgaccctcagatccgcccgtctccggagcagatccggctcgccggcggccgcacgggaggaggaggccgccgtccgccgcggatccccggcctagggtttcgccctcttcagatccggcttcttcaggttctcgcgaccccccgtctccgtttcgaattttcggggatgtttttctcttggggtttcttcggtttcgcgtgccgttaggttctgggcgcgaattggaggattcgggggtcgcggtgtcggattcgtgcgtggcggggggtggggttcgaattcgaattaggtctaggtgtgggattagggtttttggagggaactttttgaatacgttttgtgtttctgttgttctcttacatcaagctgtacgggaagttcaaatttggcatttgattccgctaagttcaagtttcccttccgcgtgactgaatcttgggtctcttatggttgtcaatggtgaacagatctggcgcccgggcacatgacaccgacggtcctcatggagtttgggcagcagaggcagattaagcggggctacgatgaaatggcgttccggggcatggcgtcagcggcgccacggggttacgcggagaccgttggcgagtcggagggcgcggcaggcagccccgttcgtgttgactccgaggactcttcggcccccaagcgcaagtgcatcagcctaaacagcgacggcttcgatgtcaagcgggagattttcgtcccagccaagatgtcctcctccgagaggaggcatctccggaagaggttccgcacagagcttgattcggtccggaatctcctcaagaagccggagtttgctgtccctgtccctgtcaatagagctcccgcgctctcgtcctcggctgcccctcgaggtaagaagggacagcgtggtaaccatgtggtccgtggtgccaaggggcgtttcttgcctacaaagccccgacctgaggcttccacggtgttgactgaggatgcgatttttaagcaatgcgatgctattctgaaaaagctgatgactcagaaatgtagtaacatattcgactccccggttgatgctgttaagctgaatattccagattattttcaaatcatcaagaaaccgatggatcttggaactatcaggaataagcttgactctggttcctacacgagtccatctgaatttgcagccgatgtacggctgaccttttcaaatgcgatgacttacaatcctcgtgggcatgtagtgcatgattatgccattcaactaaacaagatgtttgaatcaagatggaggacaattgaaaagaagctggcttccattgccacagaggcgcacgtcgaggttgacagggctgactcaaagaggaggaagactccccctgtggactgcagtgaggtgtcaacagagtgtgtgaggccaacagagtctgttagaccaacagagtctgtaaagccaaaaatgacattcgaggagaaagaatcatttgggaactgtttggcatctttgtctgaggatccggaggtaccttcacacatcattgatttgttgcagcaatgcattgacaacaacacagatcagcttggtgatggagagatagagattgatatccatgctgtcagtgatgacctactattcgagttgaagaaacatgttgacaagtatttgcaagagagagagcagagccagcaggcaaaatctgagccttctgagaatgaggctgctaatgtatctggccttagccactcctctacaaatccctgcaaaggtttttttccctggtcctttgctaatgcttagttttatgcaacatcacagtactcttacaacttctttttctctgcaggtggtgatccagttgaggaggatgtagatatttgcgggaatgcatcccctatattgatagaaaaagatgcacacaacaatcctaacaagtgtggtagcccaagtagttccagcagtgactctggatcttcttccagcggtctgtgctcctctgtgcttacatactctctttagtatgatatatgtccttgtaaacaaatatgtttttgcaagaatgatctggttacttcaaacacttgtgtatttcattatattaacttctgtgacgtttaagcttgaagctaattacttttgagtagatgtttagttgagtttagctaacgaggcactgaacaagaagtacgcacaattatacttcactgtaggtgcatctgtaccattagatgcccactagtcagtatgcatgctcatgcattcaacaatattccctctttctttgatcttctgggggactagattatcagtattatagaaactttaactggggttactgttattcatatcgttaactgacgaacaagcaggataccatcctgcaatttacccttgtgctaatttgcaacaatcttatcttatcttcagaatagcaatacatgcatcatatcttgtttgtgtggctaaatgtttgcgtaattgttcctgtttggacttctgctagtcccacttgtcataagccttcctttatcatgagtttgtcttgaggtgtcctcaatcacatttactccaataatgcagattctgagtcgggcagtgacagtgaaagcgaacaagaaaaaggtggtagcccaggaaagccgaaggtattttggctatttgtcattgggtgcttgatgaaaaattgtgaatattttgttctggccggttgattgctatgcatctataatcagacatcagcccctgcatactgtataagctgactctcatattaatttaatatacccttattgtctaatttggtcagaaacagacatgttcgtttaaataatctattactgtggtactttgagaaatttaggctcaattttgaatgtgatatctatccctcttaatcattttgtcaaggttgcttttttcttctcatcgaaacaacttttccttttcttccgtgttattgcactgaaatagttgtcatctatataatttagggaagtaagagatctgaacaactggtggagcaagaaaagagtgatgttataagtccagtcgatgccatccgtaagattcctgtgccctttctgttctactacctccccacgtcttcttaaggcttattttgatttgaaaaagtattcaacaataagcacctgcataatatcagtgtgagaactctttgaaatataaatctattggtatgttttatgcactaaatgtaattgtagtttgaccaagttttgggttaaaatctacaaaaaaattacctttagaaatcaaaatgcaccttaatcgtcacagcagcacaagtttgtagtttcatgtggcagttggatgagcttttggcttaatgctcttacaactttcaaaatcacaggtcctgctgatgatgtggagctccgtgagcaggataacgagtcaaagcctgccccagagggtaagcatgaatttgcaagcagtacatatgaggccattaaggggtctcagtgcattaagctgattggatcatctgatcctttccctatgaaactttaggggagaattcaaaacccgacaggcaagtctccccagacaagctcttaagagcagccctccttaggagtcgttatgctgatgtgattgttaaggcacaggggattctcagccaggtttgtgattagtttcatcgagtggttttgtttgttcacttttgttgcgctgcttctgacatggaacgaacatttggtgagctcagggtggagacaaacaggaggagctggaaaagctccagaaggaaggtaacaggcatatccacctgaagtttactcttaaatgatggttcttacattttccctgagaagtgccttatctatgtattcagagaaagcaaggctgttggctgaaggaaatgcagctatggaagctcgaagagctgaagctgaagctgaagccaagcgtaaacgggaccttgagagggagaaagctcgccaggccctgcaggaggctagtgaaaaaaactgcatttactggtgtcgagctttctttttcccgctaaaatttgagtggtttaacttaatgcagatggagagaacggtggaaatcaatgacaacctccatctaaaggatttggaaatgcttggaacggcaaccacagaacatattgtgagttctgttgatgagactagtcctgagcattcccaggatggcatgcccagttttcttcctggatcaggcaatccattggaacagctgggactcttcatgaaagcagatgaggaggaagaggaagaagatcctagcagtgtccccagcactaaagatgcagaggaaggagagatcaactagtcccagtgcttgtgggctagttgctgaattagctgtgcatatggtagacgctccttccttctgcttccaaactagctcgaacaaggccctcaattttgatgctgctggatgtcgtaaattatgcgcctggagtatcgcggtaacctgccctacaaatcatcatatgtgcttggaggacggcacagccataatggccgcgacttgcggtactccgagctgttgtcgggtgtatgtatgtagccatctttgaagtgccatggccaggccgcaaggtgggtaagcaatgagaggaccaaatggttctttgcacatagtgaattagtgatccaggtgctaaagctcccagcggcaaaaggtgttgcccagcggcttatagatttttcgttcgttcgttctctagttttcggtttgtccaattgcttcctgctgtaaattcgaattttgatgtagtggaggaagcgatagttgtttgctgggcatatgggcaaataggaaaaagcttctgcttttcttgtttacagggaaaaaaaaagaaaattcatgcgtcttttagcgcaatttgttgtctcctgtcagatgtttgtcgactgtttgttgtggatgttcaatattctcaatacacaagatatttcttgtctttcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0601800, RefSeq:Os02g0601800