Os02g0603800

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0603800| Description = Similar to Isoprenoid biosynthesis-like protein (Fragment)| Version = NM_001053900.1 GI:115447170 GeneID:4329911| Le...")
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Gene Name

Os02g0603800

Description

Similar to Isoprenoid biosynthesis-like protein (Fragment)

Version

NM_001053900.1 GI:115447170 GeneID:4329911

Length

5860 bp

Definition

Oryza sativa Japonica Group Os02g0603800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24511168..24517027

Sequence Coding Region

24511452..24511553,24511783..24511887,24511978..24512076,24512288..24512447,24512553..24512630
,24512851..24512992,24513109..24513253,24513356..24513418,24513510..24513569
,24513832..24513909,24513992..24514066,24514212..24514328,24514428..24514658
,24514768..24514887,24514980..24515056,24515137..24515237,24515312..24515418
,24515562..24515719,24515851..24516067

Expression

GEO Profiles:Os02g0603800

Genome Context

<gbrowseImage1> name=NC_008395:24511168..24517027 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24511168..24517027 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccggagtggcaccagcgccgctcccacatgtcagggtccgtgatggtggcatcggcttcacgaggagcgtcgactttgctaagatcttgtcggttcctgctactctaagggtgggctcatcaagaggcagggtgcttgtggccaagagctcaagtaccggttctgataccatggagctcgagccatcttcagaaggaagcccacttttagttcccaggcaaaagtattgtgaatctatatatgagacaaggaggagaaaaacccgcactgtgatggttgggaatgtgccacttggcagtgatcatcccattaggattcagactatgaccacctcggataccaaggatgttgctaaaaccgtagaggaggttatgaggatagcagataaaggggctgattttgttagaataacagtccagggtagaaaggaagctgatgcctgctttgagattaagaacactcttgttcagaagaattacaacatccccctagtggctgatattcattttgccccgacagttgctttaagagtggctgaatgctttgacaaaattcgtgtcaacccagggaattttgctgatcgccgtgcccaatttgagcagcttgaatatactgaagatgattatcaaaaagagcttgagcatatcgagaaggtcttctccccgttggttgagaaatgcaagcagtatggaagagcaatgcgtataggaacaaatcatggaagtctgtctgaccgcataatgagttactatggtgattctccacgcggaatggttgagtctgctttggaatttgccaggatctgtcggaagctggacttccataactttgtgttttcaatgaaagcaagtaaccctgttatcatggtccaagcatatcgcttgcttgtagcagaaatgtataacctagggtgggattatcctttgcacttgggagttacagaagctggagagggtgaagatgggaggatgaagtctgccattggcattggaacacttctgatggatggcttgggcgatacaatccgtgtctccctcacggaaccacctgaagaagagattgatccttgccggagattggcaaatcttggcacacatgccgcagaccttcaaataggagtggctccttttgaagaaaagcacaggcgctattttgatttccagcgtagaagtggtcagttgcctttacaaaaggagggtgaggaagtagactacagaggggtcttgcaccgtgatggctctgttttgatgtcagtttccttggatcagttgaaggctcctgagctcctttataggtctcttgctgcaaagcttgtggttggcatgcctttcaaggatctggcaactgtagattctattcttttgagggagctcccacctgtagaagatgctcaagctaggcttgcactcaaaagattagttgacatcagcatgggtgtgttgactcccttatcagagcaactgacaaagccactcccacatgcaattgctcttgtcaatgtggatgaactgtcaagcggtgcacacaaacttttgccagaaggcactagattggctgtcacccttcgtggagatgaatcatatgaacagctagatcttcttaagggtgttgatgatataacaatgttactgcacagtgttccttatggtgaagagaagactggcagagtacacgctgctaggaggttatttgagtacttagaaaccaacggtttgaacttccctgtaatccatcacatagaattccccaaaagcgtgaacagagatgaccttgttattggtgctggggcaaatgttggtgctcttctagttgatggtcttggtgatggtgtacttcttgaagctgctgaccaggaatttgagtttttgagggacacatccttcaacttgttacagggctgcaggatgcgcaacacaaaaacggaatatgtctcttgtccttcttgtgggcggacactctttgacctccaagaagtcagtgctcagattagagagaagacctctcatctgccaggcgtctctattgctatcatgggttgcattgtcaatgggccaggggagatggccgatgctgatttcggatacgttggaggtgctcctgggaagatcgacctttatgttggcaagaccgtcgtgcaacggggcattgcaatggagggggccactgacgccttgattcagttaatcaaggaccatggccgttgggtggatcctcctgttgaggagtag</cdnaseq>

Protein Sequence

<aaseq>MATGVAPAPLPHVRVRDGGIGFTRSVDFAKILSVPATLRVGSSR GRVLVAKSSSTGSDTMELEPSSEGSPLLVPRQKYCESIYETRRRKTRTVMVGNVPLGS DHPIRIQTMTTSDTKDVAKTVEEVMRIADKGADFVRITVQGRKEADACFEIKNTLVQK NYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHI EKVFSPLVEKCKQYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDF HNFVFSMKASNPVIMVQAYRLLVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGT LLMDGLGDTIRVSLTEPPEEEIDPCRRLANLGTHAADLQIGVAPFEEKHRRYFDFQRR SGQLPLQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYRSLAAKLVVGMPFKDLA TVDSILLRELPPVEDAQARLALKRLVDISMGVLTPLSEQLTKPLPHAIALVNVDELSS GAHKLLPEGTRLAVTLRGDESYEQLDLLKGVDDITMLLHSVPYGEEKTGRVHAARRLF EYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGANVGALLVDGLGDGVLLEAADQEFEF LRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGC IVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGIAMEGATDALIQLIKDHGRWVDP PVEE</aaseq>

Gene Sequence

<dnaseqindica>5475..5576#5141..5245#4952..5050#4581..4740#4398..4475#4036..4177#3775..3919#3610..3672#3459..3518#3119..3196#2962..3036#2700..2816#2370..2600#2141..2260#1972..2048#1791..1891#1610..1716#1309..1466#961..1177#gccagttcgtcgtcctcttcgccgagctcgcgagctctcgcactctgtctccatccccgcatcgcatcgcctcgccgctgctgatctcgtcgcggtcgccggaggggagctacgaggttggggagccttatctctacttcctgagatttctagtagctttgtgtatgtgtgtgtgtttgtgtgttggggggacgccgatcgggtggatcctcctgtggtggttggttgggcgcaattcgtgcttggtttatttgctggaattctagcgggggagctggcgttgtcggtgctaattgctgcgggggagctgctggaattcgtgcttctgcttgggaattagaaggtttgggtttttatgattcagagggctgtagagctcttgagattggctgcgaaaattcgggatttgatcaacttagagagcattatctttggattaggagggatttttcttaatttttcttagttttttttgagctatcaagagttcatgccatcttatttctccctttgttcttagccggaaggatacacgaatcagtttttttttttttaaaaaaaatatttatctcaattttctgcaagcatgttcaatttctaagtggaaatgctatttaaaagaccaggcttattgattggtgctatactttgattttctttggaattgtagtagaagcatcagtttcttcatgctgtcctaccaacctctcttattattagcaaagtaaagttattaaatttgctaattgttgatatgtcagtattttgtacgaattgtgaaatagttaattttcaataactacacaccatggttgtcctgttgttggactggaagcaataagggaatattccatttctgtccattaaaacccacaaagatgaccctgtgctcatctctaccattgccatgcacctgtttgtaggattgcctaacccagaagttggtgcttcgagatagccatggccaccggagtggcaccagcgccgctcccacatgtcagggtccgtgatggtggcatcggcttcacgaggagcgtcgactttgctaagatcttgtcggttcctgctactctaagggtgggctcatcaagaggcagggtgcttgtggccaagagctcaagtaccggttctgataccatggagctcgagccatcttcagaaggaagcccacttttaggtataactcgccggctgttgttcaccttgcatgtatattcgtgttagttgttcttagtgcttttaactgaatgaacattttttctgtaaagaatctgacagcatgtcttttgcccttttgttattctttagttcccaggcaaaagtattgtgaatctatatatgagacaaggaggagaaaaacccgcactgtgatggttgggaatgtgccacttggcagtgatcatcccattaggattcagactatgaccacctcggataccaaggatgttgctaaaaccgtagaggaggtacactcctatttgaagttctatgttttagtttttaattctatgcttgaataattgaatgctgggcatgcattaatcatgtgttcttttagatgttctatgtttcatgactagtgaaataacgaagtatagcactggtccaggttatgaggatagcagataaaggggctgattttgttagaataacagtccagggtagaaaggaagctgatgcctgctttgagattaagaacactcttgttcagaagaagtaagagtcatcatttttccagattcagtgagttttcatgaatgaattctcatcttgcttttgcatttcaacagttacaacatccccctagtggctgatattcattttgccccgacagttgctttaagagtggctgaatgctttgacaaaattcgtgtcaacccagggaattttggtgagtgaaataatgatgtgtatcattttagtgtcaatatcttatcaactctgtgcatatgctgagaactctacttgcagctgatcgccgtgcccaatttgagcagcttgaatatactgaagatgattatcaaaaagagcttgagcatatcgagaaggttccaaatatctcactctttagtgttaatttagtcagtaagaatgtgcagtatgtttccttacttgcatagccacttccatatcatttcaggtcttctccccgttggttgagaaatgcaagcagtatggaagagcaatgcgtataggaacaaatcatggaagtctgtctgaccgcataatgagttactatggtgattctccacgcggaatggtattatttcctttctggggatttcattcaaataacttttcgtttcatggatgtcttcaattaatgatcgttttgatagatgaatgacatgttctacaaataatttcaggttgagtctgctttggaatttgccaggatctgtcggaagctggacttccataactttgtgttttcaatgaaagcaagtaaccctgttatcatggtccaagcatatcgcttgcttgtagcagaaatgtataacctagggtgggattatcctttgcacttgggagttacagaagctggagagggtgaagatgggaggatgaagtctgccattggcattggaacacttctgatggtaattgcatttttactttgtgtattatattgcatatatcatatctttccatctgcaaagggtaagcatgccttatgtcttccttttgttgtcttacaggatggcttgggcgatacaatccgtgtctccctcacggaaccacctgaagaagagattgatccttgccggagattggcaaatcttggcacacatgccgcagaccttcaaataggagtggtaacgatttattacctttctctagttttacacttttctcttgtttagctgccaatgccacacattaattttgactatttttagtagtgttttgttctatttgttcttttaagaatttctatttatatacattatatgttctcaggctccttttgaagaaaagcacaggcgctattttgatttccagcgtagaagtggtcagttgcctttacaaaaggaggttagttcaaaataactcctatagtccatagttatcataaaaacaatagtgctagatttcttattagttgcacttatgacagggtgaggaagtagactacagaggggtcttgcaccgtgatggctctgttttgatgtcagtttccttggatcagttgaaggtaactcacatatttgttacccttttgtgcaatgtgttgatcttgtgtaactttaccaaaatatatttcaagacaatagtctattttgtaatatacaattctacaacatgatattttcagtagccatgttccatgcattctatgcatagttcatagtacatagtgagaatagcaatagcaaaaagaaggcattgatttttttctatctgaatcaaatcaattgatgcattttgtaatgatggaaggctctcttatttttcaggctcctgagctcctttataggtctcttgctgcaaagcttgtggttggcatgcctttcaaggtctgatccttatagctgtacattctagcaaacaactaaactttattggtacttcagtctaaactgatgttaatttttctatgaatatcaggatctggcaactgtagattctattcttttgagggagctcccacctgtagaagatgctcaagctgtgagttccttcaacattatttgttcttttcacaaatcacaagcttatattaacattctattcctttaaaatttttgtgttgaaatctgtaaaatggtacagaggcttgcactcaaaagattagttgacatcagcatgggtgtgttgactcccttatcagagcaactgacaaagccactcccacatgcaattgctcttgtcaatgtggatgaactgtcaagcggtgcacacaaacttttgccagaaggtagacatttgaatttgataatgatctttgttgttttgtgaattgtgtttatgtcattttctgtattttaacattttgcttagtctgttttattgatgaatcttttttttatgtaggcactagattggctgtcacccttcgtggagatgaatcatatgaacagctagatcttcttaagggtgttgatgatataacaatgttactgcacagtgttccttatggtgaagagaagactggcagagtacacgctgctaggaggtaagtgaacacagtaggccagttaataccactccctccattattaccatttgttgggatgaaccgatagtcaattctaagttacacattaagcatgaaaaatgaaaatggatttgactctgcagaaaactgacatacagaccaatgtttccacctggttttccattgttctgtacttctctttacctaaaattttattttttttaataatgttttgcaggttatttgagtacttagaaaccaacggtttgaacttccctgtaatccatcacatagaattccccaaaagcgtgaacaggtactatgaagtgcttattaagagatgcattgaccgcccatccttaccccttgaaattactgtacctttattctcttgtgcttatttgagttaaattatatgcagagatgaccttgttattggtgctggggcaaatgttggtgctcttctagttgatggtcttggtgatggtgtacttcttgaagctgctgaccaggaatttgagtttttgagggacacatccttcaacttgttacagggctgcaggatgcgcaacacaaaaacggtaagctgatgaattcttctctgttagactgtagatcccatgaacaacgtcaacctttaactcgtgagatatcatgaagaagtgcaaaattgcacttttaacagtaaatgaaccttatagcctaccgaagaggataaataactttaggcaattctctcttgtgaagcagaacattcttttggcgatttctgaccgttaattaatgctgcaggaatatgtctcttgtccttcttgtgggcggacactctttgacctccaagaagtcagtgctcagattagagagaagacctctcatctgccaggcgtctctgtaaactctcttacagaccttctgcctcccttgttttcaatcgcatattagctagcctgatggctaatcatgtctacatttgcctggcagattgctatcatgggttgcattgtcaatgggccaggggagatggccgatgctgatttcggatacgttggaggtgctcctgggaagatcgacctttatgttggcaaggtaaccttttcctatacttgtggaagttgaatcatatcaaatggaataatggaaatcacggtatatcgttgaacatagctgcaagtcaatatttgtacatgatcatgcaaacacaatcaacagtagggatgttaactgcatggcatatatatgctctttgagctgaaacaaaaacttagagctgccattttccttccattaacacaagttctacttgttttgggtgcagaccgtcgtgcaacggggcattgcaatggagggggccactgacgccttgattcagttaatcaaggaccatggccgttgggtggatcctcctgttgaggagtaggccgtagcatgtagttcatatatgtactcctccataaacaatgttgtagctgaggcacattgtattgtatccacggagtacataaatacacgttctgtacatcagtttagaaataaagtaggaataggggtggctgcaactttgtaacaccctcgtgaagcatcggcaaatccaaattagaagcgtcctgaaatcagtgaaaaagaattgatactgctattttttgtaccaattgaaaaaaaaaaggaatacatgatatgactaaatcatgggttacatcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0603800, RefSeq:Os02g0603800