Os02g0610600

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Revision as of 02:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0610600| Description = Similar to 9G8-like SR protein (RSZp22 splicing factor)| Version = NM_001053935.1 GI:115447240 GeneID:4329951| Lengt...")
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Gene Name

Os02g0610600

Description

Similar to 9G8-like SR protein (RSZp22 splicing factor)

Version

NM_001053935.1 GI:115447240 GeneID:4329951

Length

3851 bp

Definition

Oryza sativa Japonica Group Os02g0610600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24850365..24854215

Sequence Coding Region

24850679..24850844,24851497..24851755,24852644..24852732,24853799..24853887

Expression

GEO Profiles:Os02g0610600

Genome Context

<gbrowseImage1> name=NC_008395:24850365..24854215 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24850365..24854215 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgaggacgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatggcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgttccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgcacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgcagccgtagccggagtccaaggtaccgcggtcgtagtcgcagccgcagcccaagataccggaggagcccaagctatggtagaagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccaccaccagctcgtgcacgaagctacagccgatcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgcgaggagtccccctacgcaaataacgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFID FDDRRDAEDAIRDLDGKNGWRVELSTKAGSGRGRDRSGGSDMKCYECGEPGHFARECR LRIGSGGLGSGRRRSRSRSRSPRYRGRSRSRSPRYRRSPSYGRSPRDRSPKRRSYSRS PPPARARSYSRSPPPPRERSYSRSPAQPANREESPYANNA</aaseq>

Gene Sequence

<dnaseqindica>3372..3537#2461..2719#1484..1572#329..417#cttccgctcgctcgacggctcgagcttaaaaccctagagccgctcctcctcctcctcctcgcctaccccgaaacccaaatcccccccaaggcggacgcgcccgcaaaggcaagtactctccagatcccccgctgcttctgcttttgcgccccccttttccggtcggaaacgcgaggaatttccggatttacttcctctttttttttttgtgtgtgtgtgattgtgttcttctacttttggtttggtagagattggtggtggtgcttgttgctttcctcagcgtggtgggagtgatttgtgttgaatacctgcagggtcgagcgcgctcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgaggacgagttccgcgtgtttggggttctgaggaggtgtgagattctgctgactctgagctaagaatcactatatatatatattttactccctgtgttgcgtatacttgtttaatgtgcctgcttgttcgtttgacttgcttagccacttgtatggatgttagtcaagcgtgtgattttgaaattggaatgctgcagctttacaatttaagttttaaatggtgggtattagctctcaaattagtaatgatagcaggggatgattgtcttgtactgtgcttttattggggtaaaattagttcattgacatatgtgaggtggagagctcggtgcaatgcaattttgctggatataattaattcctttttatataaacaagtaatctgccttacttggtcacttattgttgggcacctaagtgctctgttctactggtgggattgggaaaatatatctaatttgagtattaggatcggtctggtttgtatgtcatgcctcatactgtgggatgcaacgtatatgctagaaagtatcaggtgaacttgaagagtaattgagtttgcagtgaacaataagatatgaagaggcagatcaagtaaagttatgatgtttaacaatgtgacgcagcgttaactgtgaagtatatgaaataaagtcatgttatctcttggtctgtcagtgtacgcctgaattcctttcttaatagactggcgatatctcaatattctgaatttcttgtctgctggtctaaagagtttatcacttactcattagttgaaccactcagtggcatgtttgtatctgcatgccaaagggttatgttgaaggctgttgatgttcacatggagtagtcatggtttgtatgccataggtttttctttgtgtgtgtgtgtgtattagtttctttattgctgatttctgtcacaacattaaagatgatttttgtatcgacaaccatggaagagatatttaggttgttactcaatactaagaatggtaatgaattcatagtctatatggagcagtaatgatttcttaattatgtctgcaaatgagattatctgattcttccactttcaactgagttgtttcttctatgcagtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatggtaataagcgtagatatttgtctttgtagttcatgcaagatagtttcatgttatgcacttctctaatgagttatctatttcaacttctggcattacatagttttgccattaaaatggctattacattatttctttagtcaagtgagtccccatcaatttttatcttggttatagtataaataactctgtctgaatcatgattcaagcaacttataaatttaatttggataaacaatagacactgaatttatagataaaatatgttgtgtccaaacatatagttttagcttaccatcatgaatgcatcttgctatctcctgtaaactgttcggtcttagaaggacgttttgaaaataatagacaggggcaaatccatagtttcataaattctgaatctcaattcctgttcactagtagaattctaaattgaacctttacatgatatcaactaagaggtccgtcttttaacctaaccgggccttgttatttatttctagagtggtgatattagtaaatcgaggtcaaaatttgacactctacatttatattgatctgatatattgtgatatacatatattgttgcaagcacattaggcccatgttgttccaagttaagaaacttgatagatattggtacatgcctactttcttttttctctgtgacttcagttgtgcatgtagctttgtacattaaaattgtgatatcatcatatgatttgttacttgaccaagatattcttttaccctttcaattgatgtgttgtatttttccaacctacttctatgctttagctattacttaacatattattatagggttactcacaaatttaaacagtccatgaattccgcttacaatcatcctgctgatatgtgatgtgcttataggcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgttccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgcacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgcagccgtagccggagtccaaggtaccgcggtcgtagtcgcagccgcagcccaagataccggaggagcccaagctatggtagaaggtaatgtaaagttattgtcttcaaacaggctctgtagatatgagtaatgacaaaatgatatcttggcatccctagattctttcttgttggccagccaaatcgttgttacatttgcagttttatataccaacttatatagctgcgctaccccatattcaagattgtgaaaatggagaaactaaaaggtgtgcttacataagaagcttgaagtacaagatatataagtattccaataaacttgtaactttctccctcactaaaatatttgctcaatggcactgatcagctttgtccgcacttacatttgggttcaatttcaaattcagggctatgttactaagatgcatatactgttaccatgatcactaataactattaagataactagtgtttattttttttagtttgttatttgttactgcattatagcatattgtggattgatcatacagataagatgacagtagattaaggcaaacatggtaacaactcggttgaaggattttgtagttgagattgtctcattttacttgaagcggaatatcatgctactgttgttgtgttgccacatacatgcccttaagcaactattttctgtgataaccgcaagtttgtttgtttttaaaacctttctttgttttaggagttacagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccaccaccagctcgtgcacgaagctacagccgatcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgcgaggagtccccctacgcaaataacgcgtaacccgcctagttccaatttgctggaaatgttaggggggctcggtgtgtttttgtaagcgcttgtgttatggagtcttgaaaagctatagggattgagtatgttcttcggaagcatttgtgtacccttcgggaaaaaccccgccgctgctgatacaattgttgaagcaggagcctagcgttttggtcgactgtatgactttgagaccccatgtagtccgtaagactaagttttgtaccattagatttttcacattgctggaatatttgtgctaaatactagtattattaattaatgtcttttgtaggtgctgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0610600, RefSeq:Os02g0610600