Os10g0426500

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0426500| Description = TRAF-like domain containing protein| Version = NM_001071178.1 GI:115482099 GeneID:4348673| Length = 1110 bp| Defini...")
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Gene Name

Os10g0426500

Description

TRAF-like domain containing protein

Version

NM_001071178.1 GI:115482099 GeneID:4348673

Length

1110 bp

Definition

Oryza sativa Japonica Group Os10g0426500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15623985..15625094

Sequence Coding Region

15623985..15625094

Expression

GEO Profiles:Os10g0426500

Genome Context

<gbrowseImage1> name=NC_008403:15623985..15625094 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15623985..15625094 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagccatggagcattgtctccgacaaccgccgccgccgtgtccgcgtccgccatcgtcgccaatacctccagagggtaccactacctcaagatcgacggctactcgcacaccaaggccacgcccaccggcgaggccctcttctcctgccagttcgccgtcggcggccaccgctggcgcatctgctactaccccaacggcaatgtcctggaggccgcggactacatctccatgttcctcgtgctcgacgagatcgtcgtcaggaacgtcaaggctcagttccagatttgcttcgccggccaggttgagaagcaggcgccgtccttggcatggaagaccgttcgagcgttcaataagcaaacttcttcgtcttcttcctggggttaccccaagttcatcaggagagaagatttggagaaatcggagtatctcagggacgattcgttcaccatccggtgcgacatcatcgtggtcgacaattaccgtgccgaggacgccagcagcggcgctgccggcttcgtctccgtgcccccgtccaacctccatagccacctcggcgacctcctcaagaacgagaagggcaccgacgtagtgttcgaggtcgccggccagaggttcacagcgcaccggtgcgtgctcgcggcacggtcaccggtcttcaacgcggagctctttggcatgatgatggagagcgacaccaccaccaacgatgccatccaaatcggtgacatggcggcgccggtgttcaaggcgttgctccacttcgtgtacaccgactcgttgccggagacgatggaggagagggaggacaccatgtgcgagcatctgctcgtcgcggcggatcggtacaacctggagaggctgaagctgatctgcgaggaaagattgtgcaagtacattggcataggcacggtgatggacatcctcgcgctggctgatcaacaccactgcaaggggctgaagaaggcgtgcttcgattttctcaggtcgccggcgaacctgagtgccgtcaccggcagcgaaagcttcgagcatctgagcaggagcttcccctctcttatgaaggagcttgttgacattctaggaacttcacataattatgcttggtga</cdnaseq>

Protein Sequence

<aaseq>MSHGALSPTTAAAVSASAIVANTSRGYHYLKIDGYSHTKATPTG EALFSCQFAVGGHRWRICYYPNGNVLEAADYISMFLVLDEIVVRNVKAQFQICFAGQV EKQAPSLAWKTVRAFNKQTSSSSSWGYPKFIRREDLEKSEYLRDDSFTIRCDIIVVDN YRAEDASSGAAGFVSVPPSNLHSHLGDLLKNEKGTDVVFEVAGQRFTAHRCVLAARSP VFNAELFGMMMESDTTTNDAIQIGDMAAPVFKALLHFVYTDSLPETMEEREDTMCEHL LVAADRYNLERLKLICEERLCKYIGIGTVMDILALADQHHCKGLKKACFDFLRSPANL SAVTGSESFEHLSRSFPSLMKELVDILGTSHNYAW</aaseq>

Gene Sequence

<dnaseqindica>1..1110#atgagccatggagcattgtctccgacaaccgccgccgccgtgtccgcgtccgccatcgtcgccaatacctccagagggtaccactacctcaagatcgacggctactcgcacaccaaggccacgcccaccggcgaggccctcttctcctgccagttcgccgtcggcggccaccgctggcgcatctgctactaccccaacggcaatgtcctggaggccgcggactacatctccatgttcctcgtgctcgacgagatcgtcgtcaggaacgtcaaggctcagttccagatttgcttcgccggccaggttgagaagcaggcgccgtccttggcatggaagaccgttcgagcgttcaataagcaaacttcttcgtcttcttcctggggttaccccaagttcatcaggagagaagatttggagaaatcggagtatctcagggacgattcgttcaccatccggtgcgacatcatcgtggtcgacaattaccgtgccgaggacgccagcagcggcgctgccggcttcgtctccgtgcccccgtccaacctccatagccacctcggcgacctcctcaagaacgagaagggcaccgacgtagtgttcgaggtcgccggccagaggttcacagcgcaccggtgcgtgctcgcggcacggtcaccggtcttcaacgcggagctctttggcatgatgatggagagcgacaccaccaccaacgatgccatccaaatcggtgacatggcggcgccggtgttcaaggcgttgctccacttcgtgtacaccgactcgttgccggagacgatggaggagagggaggacaccatgtgcgagcatctgctcgtcgcggcggatcggtacaacctggagaggctgaagctgatctgcgaggaaagattgtgcaagtacattggcataggcacggtgatggacatcctcgcgctggctgatcaacaccactgcaaggggctgaagaaggcgtgcttcgattttctcaggtcgccggcgaacctgagtgccgtcaccggcagcgaaagcttcgagcatctgagcaggagcttcccctctcttatgaaggagcttgttgacattctaggaacttcacataattatgcttggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0426500, RefSeq:Os10g0426500