Os02g0611200

From RiceWiki
Revision as of 02:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0611200| Description = Similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) (Induced stolen tip protein T...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0611200

Description

Similar to S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S- adenosylmethionine decarboxylase alpha chain

Version

NM_001053939.1 GI:115447248 GeneID:4329955

Length

3033 bp

Definition

Oryza sativa Japonica Group Os02g0611200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24903105..24906137

Sequence Coding Region

24904706..24905893

Expression

GEO Profiles:Os02g0611200

Genome Context

<gbrowseImage1> name=NC_008395:24903105..24906137 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24903105..24906137 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtcctgtcagttgctgactctccaccggtctcggcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtctttgctgaccccaatggcagggggttgcgtgcactgtcacgtgctcagattgactctgttcttgatctggcgaggtgcaccattgtgtctgagctctccaatgaggtcttcgactcgtatgtcctttctgaatcgagcctctttgtgtacccatacaagattgtgatcaagacctgtgggactaccaagctcctgctcgccattccgaggattcttgagcttgctgaagagctatctctgccacttgaagctgtgaagtactctcgtgggacattcatttttcctgaagcacagccctctccacacaagaacttctctgaggaggttgcagtcctgaaccgctacttcggcggtctcaaatctggtggcaacgcatacgtgattggagatcctgcaaagccagggcagaagtggcatgtctactatgccacccagcacccggagcaacctgtggtcactcttgagatgtgcatgactgggctggacaagaagaaagcttctgtcttcttcaagacttctgctgatggacacacaacatatgctaaggaaatgaccaagctctcaggtatctctgacatcatcccagagatggaagtctgcgacttcgatttcgagccctgcggctactccatgaatgccatccacggccctgctttctcaaccattcatgtgactcctgaggatggcttcagctatgccagctacgaggtcatgggcttcaaccctgcttcccttgcctatggtgaccttgtcaagagggtgttgagatgctttggcccgttggagttctctgttgcggttaccatctttggtggccgcaaccatgcagggacctgggccaaggggctggatgtcggggcctattcttgcagcaacatggttgagcaggagctgccttctgggggtttgctcatttaccagagcttcactgctactgctgaaatcgccaccgggtcgccacgatctgttctgcattgctttgctgatgaaaacacggagaaagctggtaaaatggaggctctctactgggaagacgatgctgtcgaggagatagatggcacagagggtaagaagatgaggagctgctga</cdnaseq>

Protein Sequence

<aaseq>MAVLSVADSPPVSAIGFEGYEKRLEITFSEAPVFADPNGRGLRA LSRAQIDSVLDLARCTIVSELSNEVFDSYVLSESSLFVYPYKIVIKTCGTTKLLLAIP RILELAEELSLPLEAVKYSRGTFIFPEAQPSPHKNFSEEVAVLNRYFGGLKSGGNAYV IGDPAKPGQKWHVYYATQHPEQPVVTLEMCMTGLDKKKASVFFKTSADGHTTYAKEMT KLSGISDIIPEMEVCDFDFEPCGYSMNAIHGPAFSTIHVTPEDGFSYASYEVMGFNPA SLAYGDLVKRVLRCFGPLEFSVAVTIFGGRNHAGTWAKGLDVGAYSCSNMVEQELPSG GLLIYQSFTATAEIATGSPRSVLHCFADENTEKAGKMEALYWEDDAVEEIDGTEGKKM RSC</aaseq>

Gene Sequence

<dnaseqindica>1602..2789#ctcagcctcatcttttggttggtttcgttttggtattcccatacactttgtttctcttccccgtctcgtggtcgagagaaaccgagaggagagagagggagaggagcgctgccgattttccggagggggagatctttttcttctccctgaaggttcgagatcgatctgcgacgaggaggagcggggaatcgtaactttatttccgaggaaattgtaagatctcgcgcgacctgtttgttcttcttggtgttcttctgcctagttacttcgtttgttttatgtttgatctatagtcttgatgatctgtgaagactagttgttgttttcggtacggatggtaggaaaggtattttcctttgtttaaggaattgcaagatctcgcgcgacctgttcttgatgttctgtctagtacttcgtttgtttgtttgatctagtatgttagatgatctatgaaaagtagttattttcggtacgaatggtaggagaagtattttcctttgttggcgtcaaaatataatctttaatcactcagtcttgtgaatggtaattctgaattcatatttttcttttctgatctatatcgtgttattctgtttatgattttttgctgagtagatccccttgtgctcgatgtatgataagttatctatatcgtaatagattcgtatgtcaaaacttagtcgaaattttcgatctcatctcttctgttagccacaggtggctgattgaaatattcttcaattgagtctgaatttttatgttatatgcaaataattgtcccgctccagttcatatgtctgatgaaacatgaatgtaaaggaattaagactttggttatatgattcgagtctgaattttcttatgcttatgcaaataatagtccaaaagaattggtgatttttttgtgtagttcatatggttgataaatatgaatgtgtctcaaaagcaacgaagattttgatgacaagacaatctgctatttgagtctgaaatttcttatgcttttgcaaataatagtcatagtcagaacgaattactgaaatttccctccagttcatacggttgatgaaacatgaatgtatctctttagtaattgaaactttgacgatcagacaatctgttgcattgcctagtcttgcagattctcatcgatccttttaattcttctctgcagtcaacaaattgatgcactaatggagtccaagggtggcaaaaagaagtctagcagtagtcgttcctccctgatgtacgaagctcccctcggctacagcattgaggacctccgacctgccggcggcatcaagaagttccgctctgctgcttactccaacgtatgtatcgaatcaactgaacactagtttgtttctctaattggcggttgattggttgctcacggtgttaaattgttttcatctcttgcagtgcgcgaggaagccctcttgatagcccccttggctaccttgacctagtagtttagttactcctctgaattctcgttttgggctttcttacatctctctggctagctgcttcccagtgaccgggaaggtcatcagtcctgcttcctttcttcctcatctctggcatcgtccttcgaaacaatggcagtcctgtcagttgctgactctccaccggtctcggcgatcgggtttgagggatatgagaaacgcctcgagatcactttctccgaggcgcctgtctttgctgaccccaatggcagggggttgcgtgcactgtcacgtgctcagattgactctgttcttgatctggcgaggtgcaccattgtgtctgagctctccaatgaggtcttcgactcgtatgtcctttctgaatcgagcctctttgtgtacccatacaagattgtgatcaagacctgtgggactaccaagctcctgctcgccattccgaggattcttgagcttgctgaagagctatctctgccacttgaagctgtgaagtactctcgtgggacattcatttttcctgaagcacagccctctccacacaagaacttctctgaggaggttgcagtcctgaaccgctacttcggcggtctcaaatctggtggcaacgcatacgtgattggagatcctgcaaagccagggcagaagtggcatgtctactatgccacccagcacccggagcaacctgtggtcactcttgagatgtgcatgactgggctggacaagaagaaagcttctgtcttcttcaagacttctgctgatggacacacaacatatgctaaggaaatgaccaagctctcaggtatctctgacatcatcccagagatggaagtctgcgacttcgatttcgagccctgcggctactccatgaatgccatccacggccctgctttctcaaccattcatgtgactcctgaggatggcttcagctatgccagctacgaggtcatgggcttcaaccctgcttcccttgcctatggtgaccttgtcaagagggtgttgagatgctttggcccgttggagttctctgttgcggttaccatctttggtggccgcaaccatgcagggacctgggccaaggggctggatgtcggggcctattcttgcagcaacatggttgagcaggagctgccttctgggggtttgctcatttaccagagcttcactgctactgctgaaatcgccaccgggtcgccacgatctgttctgcattgctttgctgatgaaaacacggagaaagctggtaaaatggaggctctctactgggaagacgatgctgtcgaggagatagatggcacagagggtaagaagatgaggagctgctgatgagggaagcgcactgaagattaaagaatactcaaaactccagtagcgatcactctgttactttgtgaagcagccagccagactattcatatagtactagtatatgctatgaccaatgttctttattatcttgcatatattctgaataaaagggctctaggtggtctgctttgtctgccacagtgagcaaaatgtatccgaatatcaaactttaatgttgggaatataatacaagtcattttat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0611200, RefSeq:Os02g0611200