Os10g0427200

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0427200| Description = Conserved hypothetical protein| Version = NM_001189233.1 GI:297727596 GeneID:9269501| Length = 3576 bp| Definition ...")
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Gene Name

Os10g0427200

Description

Conserved hypothetical protein

Version

NM_001189233.1 GI:297727596 GeneID:9269501

Length

3576 bp

Definition

Oryza sativa Japonica Group Os10g0427200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15648213..15651788

Sequence Coding Region

15648213..15648551,15649406..15649804,15650112..15650326,15650888..15651161,15651627..15651788

Expression

GEO Profiles:Os10g0427200

Genome Context

<gbrowseImage1> name=NC_008403:15648213..15651788 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15648213..15651788 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgcacgccagctgtcgccagccctccaggcttacacacgcgccgtcgccgtgctagctcagccgcctgcatgcgcgcgcctcgccgtcgccggtctcgttgcccagccgcctgtgcatgcgcgcctcgcagtcgccggtcgcggcgtcgccccgccgcctgagaatgagagtgctagtggggaaagcagtccaagcacagtaccgcctgatgtagagaccgatgatattggaggagggccaaatgatgagtcatcaagtgatgaagacaataatggtggtgcatatgacataaagcatgatcctggattgaggattcctatatcacaatatgatgtcaatgaccaagattcagttagaagggagtatattgcattgggcccttgtcaaccaaagatgaagaaggaggattttccgcagcatgagtgtggagaggaacttcatgatgagtgttttgcaattcttgctgatgagcctagtgatgcctaccaacaagaacaattggctctttgcttgcggtttgtcaataagacggggcaactagttgaatggtttcttggtcttgtccatgttgaagatactacatcattgactcttaaggaggcaattaagtccttgcttattaagtgccatctacctttatccaagcacaaagttaaagttgttgacaaggatgggaattataagcctatacaaaggtcgaagaagttcttcaaaaatgctattaattaccatcgattccatgccgatatgtttttgggtgtcattgataggcaacttcaagagctcaataacaaatttgatgaggtaaacccagagttacttagatgcatgtcatcatttagcccagctaaatccttctctgattttaatgttgacaacttagttaagcttgccaagttctatcctaatgattttgatgttgaagaaatgaaccaactcacctttcaactgaaccgctatattagtgatgtgagtaaggatgagaatttcacaaatttgatgagtttggcagacctgtctatgatgcttgtgaaaacaaacaagcgatggcggaggtacagcgacgatgacgactcttacccttcccgtctccccatcaacctcgatgacagggctaggcacggagacagtggcgacggccgtccttctttcttctcctctgccttaaagcaagaggagagcgccagaggatggggcgtcgtggtagaggaaaggggtgccagcgcggttggggaggtggcaagtgtggtcgtgcccggctggttcgggcacgacacgagcgcagtggacgacgatggcaatgagctcggaacaaccgtatctggcgactctaagcttgcccatttgtgtgattttttcctctcttttgccccttttttctag</cdnaseq>

Protein Sequence

<aaseq>MPARQLSPALQAYTRAVAVLAQPPACARLAVAGLVAQPPVHARL AVAGRGVAPPPENESASGESSPSTVPPDVETDDIGGGPNDESSSDEDNNGGAYDIKHD PGLRIPISQYDVNDQDSVRREYIALGPCQPKMKKEDFPQHECGEELHDECFAILADEP SDAYQQEQLALCLRFVNKTGQLVEWFLGLVHVEDTTSLTLKEAIKSLLIKCHLPLSKH KVKVVDKDGNYKPIQRSKKFFKNAINYHRFHADMFLGVIDRQLQELNNKFDEVNPELL RCMSSFSPAKSFSDFNVDNLVKLAKFYPNDFDVEEMNQLTFQLNRYISDVSKDENFTN LMSLADLSMMLVKTNKRWRRYSDDDDSYPSRLPINLDDRARHGDSGDGRPSFFSSALK QEESARGWGVVVEERGASAVGEVASVVVPGWFGHDTSAVDDDGNELGTTVSGDSKLAH LCDFFLSFAPFF</aaseq>

Gene Sequence

<dnaseqindica>3238..3576#1985..2383#1463..1677#628..901#1..162#atgcctgcacgccagctgtcgccagccctccaggcttacacacgcgccgtcgccgtgctagctcagccgcctgcatgcgcgcgcctcgccgtcgccggtctcgttgcccagccgcctgtgcatgcgcgcctcgcagtcgccggtcgcggcgtcgccccgccggtcgcccacaggccacagccccctcgccggctcgctgcctccgcgcctcgcgcctagccagcgcggcggcgccccgcgcccggcggccgcctgcgcgcctcgccgcctcccgtcctcgagacctcgacaatagtcagcaagatagcaagcggttgcaacggtgagtcgccgagtcggtgaactgaagtgtgttgattattttagcttcattgtttgtgaatgactaactagattaggatttaggaaccactgaaccagtgctgctttgctcaattgctctttgatattgttgtttgtaggtttgaaacatgaagagaaaaaagggtcccattgttaatttttagaaaatgctgctgcaaaacaaaaaagcaagaaccaactggtccaagtcaaccttcttccattggtccaagtcaaccttcgtgtattgagagtcaggtgcaagtagtgatatatcaaggttagcctgagaatgagagtgctagtggggaaagcagtccaagcacagtaccgcctgatgtagagaccgatgatattggaggagggccaaatgatgagtcatcaagtgatgaagacaataatggtggtgcatatgacataaagcatgatcctggattgaggattcctatatcacaatatgatgtcaatgaccaagattcagttagaagggagtatattgcattgggcccttgtcaaccaaagatgaagaaggaggattttccgcagcatgagtgtggaggtatgcgtcgcttcctgccaaagtggttttctgagtttaagtggcttgagtatagtgtgcacagagatgctgcatagtgctttgtttgttatttgttcaaagatagcactagcaatcatggtggagatgcttttgctaatgaaggcatagaaattagaacatgaaaattagatttagtaaacatgctggtgctgtcaatagtgcatattgtgaagctgaagaaaaatacaatttgttcatacaacctaagacatcaattcgtgagtccttcgcatcaaactccgcagaggtttaggctcaatatttagctcacttgacatggtcactcaagtgcataagctatcttttgcggcaggggttggctttttgtggtcatgatgagtcaggattctaacaacaaaggaaattttagggaacttgtgcaatggatagctgggaactttgaagaagttaataaggtggttctaggaaatgctccaactagttgtcagatgataggccacaagattcagaaacaactcattagttcttgtgctcatgaaacaactaaacttgtcatagaggaacttcatgatgagtgttttgcaattcttgctgatgagcctagtgatgcctaccaacaagaacaattggctctttgcttgcggtttgtcaataagacggggcaactagttgaatggtttcttggtcttgtccatgttgaagatactacatcattgactcttaaggaggcaattaagtccttgcttattaagtgccatctacctttatccaaggtacgtggacaaggatatgatggtgctagtaacatgaagggtcatattaatggtttgaagaaactaattatggatgagtccccctgagcttactatgtacattgttttgctcatcaacttcaactaacccttgtagttattgctaaggagaatactgattgtgcatggttctttgggcaacttgcatatttgttgaatgtccttgggatgtcttgtaaaaagattcacaaaggtagaacttaatgttttgagagaagattctggatggcaagactttcttaagagggtcacttctttttgtgtgaagcacaaagttaaagttgttgacaaggatgggaattataagcctatacaaaggtcgaagaagttcttcaaaaatgctattaattaccatcgattccatgccgatatgtttttgggtgtcattgataggcaacttcaagagctcaataacaaatttgatgaggtaaacccagagttacttagatgcatgtcatcatttagcccagctaaatccttctctgattttaatgttgacaacttagttaagcttgccaagttctatcctaatgattttgatgttgaagaaatgaaccaactcacctttcaactgaaccgctatattagtgatgtgagtaaggatgagaatttcacaaatttgatgagtttggcagacctgtctatgatgcttgtgaaaacaaacaaggtttctcgctatgaccttgtttacaaacttctgaaatttgtgttagttctccctgttgcaactgctagtgttgagagggttttctcttcaatgaactatatcaaaaacaagttaagaagcaagatggggcaagaatatttgaatgattgcttggttatattcattgaaagatatttcttcttgcaagttaagaatgaagacatcatcaatcattttcaaaatatcaagaaacggaaagttcttctctatattgtaagagttcttatcattttgccattttgtatggtctataaatttgatatgttttttcaattaatagtttagtaatgtactctaatatgtttaacgcattcaatttatggtcaattctatccatttatgactttatgaaatcatgcttataccgttgcatattatacaactattagatcttgggttggaaaattttctctcctacaatttcgaatacccaagttgaaaaacctaaccccgcccctgttcccattgtatttttttatttttaatcggatactcctgggttttttttgaatttttgtgccacatcaacgccacgtaggcgccacgttaggcaaaaccaccatccaaaccgccttatgatcttataaaattatttcccctccccttctctctctctgaaaatgatggcgtcggcggcacctatccccctccgtcgctccttctctccctacctcactggtagcgcctctccccaccggcggcaccgctccccttccccctcacccatcgacgatgccgctccccctccccctcccccctccccccaccggcggcgccactccatctccccctgtccctcccatcttgtggtgcagcgatggcggaggtacagcgacgatgacgactcttacccttcccgtctccccatcaacctcgatgacagggctaggcacggagacagtggcgacggccgtccttctttcttctcctctgccttaaagcaagaggagagcgccagaggatggggcgtcgtggtagaggaaaggggtgccagcgcggttggggaggtggcaagtgtggtcgtgcccggctggttcgggcacgacacgagcgcagtggacgacgatggcaatgagctcggaacaaccgtatctggcgactctaagcttgcccatttgtgtgattttttcctctcttttgccccttttttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0427200, RefSeq:Os10g0427200