Os02g0622400

From RiceWiki
Revision as of 02:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0622400| Description = Conserved hypothetical protein| Version = NM_001054003.1 GI:115447376 GeneID:4330021| Length = 2788 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0622400

Description

Conserved hypothetical protein

Version

NM_001054003.1 GI:115447376 GeneID:4330021

Length

2788 bp

Definition

Oryza sativa Japonica Group Os02g0622400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25637791..25640578

Sequence Coding Region

25638427..25638544,25639065..25639120,25639332..25639462,25639544..25639679,25640094..25640225
,25640315..25640350

Expression

GEO Profiles:Os02g0622400

Genome Context

<gbrowseImage1> name=NC_008395:25637791..25640578 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:25637791..25640578 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgagacagtgttcactccctcgttggagggtatgaagcatgttaagtcagagagcagtgtcatactcaccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatattcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaacaagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttctagttttacagtggcaatgaagcttgctcctaatagagagaaatttatggaggtcattagtggaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctcaaagagaatcatgattttctggccagtgttggacttgatgatctgaaggcttcttaa</cdnaseq>

Protein Sequence

<aaseq>MAETVFTPSLEGMKHVKSESSVILTKPFLDVCKQILPVLDKFGA AMALVKSDIGGNITRLENKYSSDPSKYEQLYSMVQEEVQNKTAKGSSSCTNGLLWLTR AMDFLVELFRNLLEHQDWTMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAPNREKFM EVISGTGDIKADIEKFCTTFYPFLKENHDFLASVGLDDLKAS</aaseq>

Gene Sequence

<dnaseqindica>637..754#1275..1330#1542..1672#1754..1889#2304..2435#2525..2560#ctcgcctcggcatcttctactgctcgccatcgcactccacctcgggtgaaagccggcgccttttggatcacccctctcctccgatcgaccgggtctctgctgaggtctccacgccgccgacaggtagcgcgaggtaagggggaaaaatattggcttcttggtcaccggtttggatgtggccagtgtgtggatttcgtgatcagtgggtgtttcttgggtcctgggatctaagctcggaagattagtagaaagtgctttccacttcttggattagcggttcgggggtggcctggtggctctgatctgatccagggtcgagttgtttctgctgagtggtagaaagtctagaagaaatcttgttgctcggttagtttgtttggtgtgatgcgtagtggatagcacgggctaattgcttgttgttgatgtccctgatctgtgttttggtacaggtacttagcagttagcacaactgatcctgcaactgaaagcagttgctgattggggaattcattgccacgggtcatagtgattagaaactgttgtgggatcagtgtctctttagtgaattagtgtggatttttgtttgctacggccgatatgttgacgcattcattgttttctattgcagctagagagatggccgagacagtgttcactccctcgttggagggtatgaagcatgttaagtcagagagcagtgtcatactcaccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgggtaactgtctttgatttccatattcagatcagtagcttggttccttttttaatttgtatttactatgtttagttcagtactgcggtggagcagtaaatggttttctaagttgagacaagcttttggcaattggcagtggtctatactgttgttggattttgcctatcaaaatcaccaaatagttatgttggtttgtgggcatttggcatttgatttacctgtaatgctgctacaaatagttgattggaccaatccatcacctcggtagaattggtcagtgaccttctgagggtaacaccatatgatatttaatgtaggagttcagtaaagttttttttgggggtttagaacttagttgttgctatatacacatttctaaacaatataagttttgacatacatttgtgtggttgtgttagtacttcaattaaatcgtttgttagttttaagtcagggcatactctaactattgtggctaagtgttcctttgtctcctttgttctctgactttgtattccagataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacggtaagcatcctttttctgcatgacactgttaataatacattgtgtttcattcctcattttcattagtaaatttctagtgttatctatgtgatagatgcataaatcatatttactttagaatgatttgcttacttagaagtgtccatatcccttttggagcccacagatttctagtttgttttgctaacaactgatctaattcattcttcagaggctggaaaataaatattcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaacaagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgaggtgcttcaaaccttcttggataatttatcacctttcagttgcagcttaagcagccttattaactcaaaattttactttcagggctatggacttccttgttgaattattccgtaacctgcttgagcatcaagactggactatgagtcaagcttgtactgattcatataccaaaactctgaagaaatggcatggttggcttgccagttctagttttacagttgagtcgttctctctatgttgacccgcataatcagcatatacatggtgttactataatctcttcaacattattattttagtgaaattagaatgtttacgcctaaataaactaatgcaagggtggttccttctcaagaacttcactaaaaagacaatttttctgttttagcaatctttagaactagtggaaaatcattatttttctttctcgaatacagtggagaatcattataacccaactgttttcagtcatatatgctcttttagtgaatacgtacaagagcacttcagttcataattgggtgagagaagggctttgcctttctgtgagaagttctttaatttggtcatgtttgcttcctttatttgcttttcctccgtttgtatgagtgctcatatgagaaattggcaggtggcaatgaagcttgctcctaatagagagaaatttatggaggtcattagtggaacgggtgacataaaagctgatatcgagaaattctgcacgaccttttacccttttctcaaagagaatcatgattttctggtatggcctctcacattttgaaggcttagtcctttagtctgtaattgtctgattctaatgtgatgtcttccatcatactattcttgcaggccagtgttggacttgatgatctgaaggcttcttaatgcattcctatgcaacaattacccacagaataaacctgtcttacctgtctaatgaaatttagtgctgccgagggtatgctgttttccacctatctttggaaaactatagggcaataatgaatgtcgtgagctcagaacgattgggcaagcccatgggcagctatacacaatgtatgtgttgctttatgcaaaaaggtcaactgttgaaaagcattcccgtgctagagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0622400, RefSeq:Os02g0622400