Os02g0626400

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Revision as of 02:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0626400| Description = Phenylalanine ammonia-lyase (EC 4.3.1.5)| Version = NM_001054017.1 GI:115447404 GeneID:4330036| Length = 4095 bp| D...")
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Gene Name

Os02g0626400

Description

Phenylalanine ammonia-lyase (EC 4.3.1.5)

Version

NM_001054017.1 GI:115447404 GeneID:4330036

Length

4095 bp

Definition

Oryza sativa Japonica Group Os02g0626400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25872155..25876249

Sequence Coding Region

25872443..25874189,25875692..25876101

Expression

GEO Profiles:Os02g0626400

Genome Context

<gbrowseImage1> name=NC_008395:25872155..25876249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:25872155..25876249 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgcgaaaccgggcttgttcgttccctgaacggcgacgggctgtgcatgtcgtcggtgtcggcgccgccgcgggccgacccactgaactgggggaaggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggacttccgccagccgctggtgaagatcgagggcgccagcctgacgatcgcgcaggtggccgccgtggccgccggcgccggcgacgccagggtggagctcgacgagtccgcccgcggccgcgtcaaggccagcagcgactgggtcatgaacagcatgatgaacggcaccgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaaggagggcggcgcgctccagagggagctcatcagattcctcaatgccggcgccttcggcaccggcaccgacggccacgttctgccggcggaggcgacgcgcgcggcgatgctcgtccgcatcaacaccctcctccagggttactccggcatccgcttcgagatcctcgaggccatcaccaagctgctcaatgccaacgtcacgccgtgcctgccgctccggggcaccatcaccgcctccggtgacttggtcccactgtcctacattgccggcctcatcaccggccgccagaactccgtggccgtcgccccggatggccgcaaggtgaccgccgccgaggcattcaagattgccggcattgagcacggcttcttcgagttgcagcctaaggaaggtcttgccatggtgaacggcactgccgtcggctctggccttgcatcgaccgtgctctttgaggccaacgtccttgccatcctcgccgaggtcctgtccgccgtgttctgtgaggtcatgaccggcaagccggagtacaccgaccacctgacacacaagctgaagcaccaccctggacagatcgaggctgccgccatcatggagcacatcttggaaggcagctcgtacatgaagctggcgaagaagctcggcgagctcgacccgttgatgaagccgaagcaggacaggtacgcgctccgcacgtcgccgcagtggctcggcccacagatcgaggtcatccgcttcgccaccaagtcgatcgagcgcgagatcaactccgtcaacgacaacccgctgatcgatgtctcccgtggcaaggcgcttcacggtggcaacttccagggcacgcccatcggcgtgtccatggacaacacccgcctcgccctcgctgccatcggcaagctcatgttcgcgcagttctctgagctcgtgaacgacttctacaacaacgggcttccttccaacctgtccggtggacgcaaccccagcttggactatgggttcaagggcgcggagatcgccatggcgtcgtactgctccgagctccagttcttgggcaacccggtgaccaaccatgtccagagcgcggagcagcacaaccaggacgtgaactcgcttggtctcatctcctccaggaagaccgccgaggccatcgacatcctgaagctcatgtcctccacgttcttgatcgccctgtgccaagccatcgacctgcgccacctcgaggagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagcatgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcgatcgaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaacggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgctga</cdnaseq>

Protein Sequence

<aaseq>MECETGLVRSLNGDGLCMSSVSAPPRADPLNWGKAADELAGSHL DEVKRMVEDFRQPLVKIEGASLTIAQVAAVAAGAGDARVELDESARGRVKASSDWVMN SMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRA AMLVRINTLLQGYSGIRFEILEAITKLLNANVTPCLPLRGTITASGDLVPLSYIAGLI TGRQNSVAVAPDGRKVTAAEAFKIAGIEHGFFELQPKEGLAMVNGTAVGSGLASTVLF EANVLAILAEVLSAVFCEVMTGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMK LAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVS RGKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRN PSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAID ILKLMSSTFLIALCQAIDLRHLEENMKTAVKNCVMQVAKKSLSMNHMGGLHIARFCEK DLLTAIDREAVFAYADDPCSANYPLMQKLRAVLIEHALANGDAERVLETSIFAKVAEF EQHVRAALPKEVEAARAAVENGTPLVPNRIKECRSYPLYRFVREEVGTEYLTGEKTRS PGEELNKVLVAINERKHIDPLLECLKEWNGAPLPLC</aaseq>

Gene Sequence

<dnaseqindica>2061..3807#149..558#aagaagagcatcagcttccaactcgagctcttcttctacttaaaagaaaaaaaacacgcatatctagtagtactgttctagtgttcttgtacttctattcgtgtgctactactgcatctgtgagtctgtgtgactgtacacatctgtaatggagtgcgaaaccgggcttgttcgttccctgaacggcgacgggctgtgcatgtcgtcggtgtcggcgccgccgcgggccgacccactgaactgggggaaggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggacttccgccagccgctggtgaagatcgagggcgccagcctgacgatcgcgcaggtggccgccgtggccgccggcgccggcgacgccagggtggagctcgacgagtccgcccgcggccgcgtcaaggccagcagcgactgggtcatgaacagcatgatgaacggcaccgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaaggagggcggcgcgctccagagggagctcatcaggtgacaaatcgatcgcaagctcgatcctttattttgtttcacttccattgttcatcagtctttacatcagcagttcgattctatgattacgacgagattgaggatcaccatattagtttatttaatctctcagaacttgtggggcgaactagatgcgcttgcatgtgctctcgctgcatagttgtgtgtgtgcccacgagataccgtcattctcggagccaaaaaggattctttcggggtgtcagccagccaatactagtactggagtatatccttcgccattattacactattatgatccatccagctgtagtatttgggtaaaatcatcaccatatttattacttctcgccaccatccaaacacgcagatgtactgtacctcttgctcagttcatgccacatctgaaccggctactagtagtaaccgtcctgcactgttacacctttaatttgcaccacacgaacacgactcgtgttaactaaaaagaaagtgaaaacacaagacgacgattatgtgtccgttggcgcgtcgctagaactcctttttgcgtctttcgtctgaggagaggagaaggagaaaggaagcaacctttttctctcttttctttttcgggacatttgataatatgtttatccatgagataattctgtcgccgagcgagaattcgggatctcgaggagggtatccggccatccggggccaagggtaggcagctgctgggctatcatatcaacgcgagtagtaataacaccaactgcgtgcgtttgctcggttcggccgacgggttggcgcgatggcgccgtcgcgtcgcgactcacgccatgcacgcggggcgccggacaaagcgttcggcagcgcagaaaacttcacatggagacgacgtgggcagtgggctggcctgccttcgggggattttcccacggccacgttacggcgaaagcgagctgaggtttggtgacacatcccctgtcctcgcagggagacagacaaattcacggctctggttttcctttcctgttttatcatcgactggtttgggagcgtccaattattaaacggacagtatgcaaataaaattgaaggggaaatagtcaaaataccctgaacatgtggagttgtggacgagtagttgtagtattcgtatccgagataaggtccaaaacactttgtttttcgttatttaaacgtgatgtagaacaatattggtacttatttgacttttaccacatggcggtgaccgacagttctgcacagctgcacaactacgcgcatctgacttgtttgctctccttatcatggggagcataattaattaagcaattatgaaactctaaattaatcatcagtcggcacggcggcagtgtgtatgtacaccgaaggaaaatacggaaagagaatacgcaatcatatatctgaccaagtttttctgaacgtgttatatgtttttttttagtgagctctgaactgaaattgacatgtctatcgctctgttttaacagattcctcaatgccggcgccttcggcaccggcaccgacggccacgttctgccggcggaggcgacgcgcgcggcgatgctcgtccgcatcaacaccctcctccagggttactccggcatccgcttcgagatcctcgaggccatcaccaagctgctcaatgccaacgtcacgccgtgcctgccgctccggggcaccatcaccgcctccggtgacttggtcccactgtcctacattgccggcctcatcaccggccgccagaactccgtggccgtcgccccggatggccgcaaggtgaccgccgccgaggcattcaagattgccggcattgagcacggcttcttcgagttgcagcctaaggaaggtcttgccatggtgaacggcactgccgtcggctctggccttgcatcgaccgtgctctttgaggccaacgtccttgccatcctcgccgaggtcctgtccgccgtgttctgtgaggtcatgaccggcaagccggagtacaccgaccacctgacacacaagctgaagcaccaccctggacagatcgaggctgccgccatcatggagcacatcttggaaggcagctcgtacatgaagctggcgaagaagctcggcgagctcgacccgttgatgaagccgaagcaggacaggtacgcgctccgcacgtcgccgcagtggctcggcccacagatcgaggtcatccgcttcgccaccaagtcgatcgagcgcgagatcaactccgtcaacgacaacccgctgatcgatgtctcccgtggcaaggcgcttcacggtggcaacttccagggcacgcccatcggcgtgtccatggacaacacccgcctcgccctcgctgccatcggcaagctcatgttcgcgcagttctctgagctcgtgaacgacttctacaacaacgggcttccttccaacctgtccggtggacgcaaccccagcttggactatgggttcaagggcgcggagatcgccatggcgtcgtactgctccgagctccagttcttgggcaacccggtgaccaaccatgtccagagcgcggagcagcacaaccaggacgtgaactcgcttggtctcatctcctccaggaagaccgccgaggccatcgacatcctgaagctcatgtcctccacgttcttgatcgccctgtgccaagccatcgacctgcgccacctcgaggagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagcatgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcgatcgaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaacggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgctgaacagaaatggaatactaaaaaaaatgcaaaacaagaagacgtatagcaacacaaaactgaaagatagagagcatttcgagagtgtgaatgttttctactatgtctagatgaacatggtgatgatactattttacggttctttgtagttaacttgatgttactgttgctgtttcagcttctgcggttgccataacctgcagttccgcatggcctggcacgcagctttctgaaacttttggtgctgtaaatttgtataagttgggggactaaagtaaattattttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0626400, RefSeq:Os02g0626400