Os02g0627700

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Revision as of 02:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0627700| Description = Similar to Cyclic nucleotide-gated channel A (Fragment)| Version = NM_001054020.1 GI:115447410 GeneID:4330041| Lengt...")
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Gene Name

Os02g0627700

Description

Similar to Cyclic nucleotide-gated channel A (Fragment)

Version

NM_001054020.1 GI:115447410 GeneID:4330041

Length

2801 bp

Definition

Oryza sativa Japonica Group Os02g0627700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25939032..25941832

Sequence Coding Region

25939032..25939060,25939302..25939881,25939973..25940185,25940286..25940575,25940669..25940780
,25940907..25941131,25941221..25941832

Expression

GEO Profiles:Os02g0627700

Genome Context

<gbrowseImage1> name=NC_008395:25939032..25941832 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:25939032..25941832 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatgcaatggctcacgagccgtcaggtttcagaatgacatggagctcccgcactggaaaacatcaagcgtgccggagtgcacgtcgtcgagcaggtcgacgaagcacggcaaggctcaacaccagcagcagcagcaccacgacccgaggaaatggcggcgaggcggcggcggcggcggcagcctcaaggaccgggtgctgtcgcgggccttctcggaggagctggagtcgctgatgagctccggggcgaaccacctcttcttcgacccgcgcgggcagttgatccacctgtggagcaagatcttcctcgccgcctgcctcgcctccctcttcgtcgacccgctcttcctctacctcacggggacgaggcagaacatgtgcatcgagctgaagtactcgctggcgttcacgctctccatgatccgctccctgctcgacctcttctacgccgcgcacatcttcttccgcttccgcaccgccttcatcgccccctcgtcgcgcgtgttcggcaggggcgagctcgtcatccagccctgcaagatcgccaggaggtacctcgccggcaccttctggttcgatctcgtcaccgcgctgcccctaccgcagttcgtgatatggattgtgataccgaagctgaaagagtccgcgacggccaaccggaagaacatcctccgcttcagcatcatcttccagtacctgccgcggctgttccagatcttcccgctctcgaggcagatcgtcatggccaccggcgtcatgacggagaccgcgtgggccggcgccgcctacaacctcatactctacatgctcgcgagccacgtgctgggagcactgtggtacctcttctcggtgcagaggcaggaggcgtgctggcgagaggcgtgccacgtggagggcccgtcgtgccagaccctgtttttcgactgcaagacggtcagcagcaacaggacgatgtggtacgagctgagcaacattacgagcttgtgcacgcccagcaatggcttctaccagttcggcatctacggcgaggcgctggacaacgggctgacgtcgtcgtccttcacgcagaagtacttctactgcttctggtgggggctgaagaacctgagctgcttggggcagaatctgtcgacgagcctgttcatcggggaaataacattcgcaaccgtcattggcgttcttgggctggtgctgtttgctctgctcatcggcaatatgcaagcgacgatggtgcggctggaggagtggcggacgaagcggacggacatggagcgatggatgaaccaccggcagataccgcagccgctgaagcagtgcgtgaggaggtaccaccagtacaagtggttggccacccgcggcgtcgacgaggaggcgttgctcgaggacctccccatggacatccgccgcgacatcaagcgccacctctgcctcgacctcgtccggagagtgccgctgttcgacgagatggacgagcggatgctggaggcgatctgcgagcggctgcggccggcgctgtacacgaggggcacgcggctggtgcgggagctggacccggtggactccatgctgttcatcatccgggggtacctcgactcgtacacgacgcaggggggcaggtcggggttcttcaactcgtgccgcatcggggcgggggagttctgcggggaggagctcctgccgtgggcgctggacccgcgccccgccgcgtcgctgccgctgtccacgcgcaccgtgcgggccgtgtcggaggtggaggcgttcgcgctcgtcgccgacgacctccggttcgtggcgtcgcagttccggcgcctgcacagcgcgcgcatccggcacaggttccgcttctactcccaccagtggcgcacgtgggcggcgtgcttcatccaggccgcctggcgccggaacaagcggcgccgcgcgtccatggagctcaggatgcgggagggcggcgaggcgcggccgggagggagcgtgaggtgtcgtcggcacagctgcgacggcaaagcgctcatcaagaaacccatggaaccggatttcaccgtcgaagaagaggactga</cdnaseq>

Protein Sequence

<aaseq>MACNGSRAVRFQNDMELPHWKTSSVPECTSSSRSTKHGKAQHQQ QQHHDPRKWRRGGGGGGSLKDRVLSRAFSEELESLMSSGANHLFFDPRGQLIHLWSKI FLAACLASLFVDPLFLYLTGTRQNMCIELKYSLAFTLSMIRSLLDLFYAAHIFFRFRT AFIAPSSRVFGRGELVIQPCKIARRYLAGTFWFDLVTALPLPQFVIWIVIPKLKESAT ANRKNILRFSIIFQYLPRLFQIFPLSRQIVMATGVMTETAWAGAAYNLILYMLASHVL GALWYLFSVQRQEACWREACHVEGPSCQTLFFDCKTVSSNRTMWYELSNITSLCTPSN GFYQFGIYGEALDNGLTSSSFTQKYFYCFWWGLKNLSCLGQNLSTSLFIGEITFATVI GVLGLVLFALLIGNMQATMVRLEEWRTKRTDMERWMNHRQIPQPLKQCVRRYHQYKWL ATRGVDEEALLEDLPMDIRRDIKRHLCLDLVRRVPLFDEMDERMLEAICERLRPALYT RGTRLVRELDPVDSMLFIIRGYLDSYTTQGGRSGFFNSCRIGAGEFCGEELLPWALDP RPAASLPLSTRTVRAVSEVEAFALVADDLRFVASQFRRLHSARIRHRFRFYSHQWRTW AACFIQAAWRRNKRRRASMELRMREGGEARPGGSVRCRRHSCDGKALIKKPMEPDFTV EEED</aaseq>

Gene Sequence

<dnaseqindica>1..29#271..850#942..1154#1255..1544#1638..1749#1876..2100#2190..2801#atggcatgcaatggctcacgagccgtcaggtgagcccttgtgccaatcagttatttccagcacaaacttcagatcacttattaactggttattgccagttctctaaacatgagcatggtagatgtgtttaaccaacctgacatcttcagatcactcaacaaatatttcagcttgatcaatgtgcttgatagaattcacagctagttaaagttgagcgaattatatgcttggtacagcagaatctgtaagaaaaaacccttgtttcttcaggtttcagaatgacatggagctcccgcactggaaaacatcaagcgtgccggagtgcacgtcgtcgagcaggtcgacgaagcacggcaaggctcaacaccagcagcagcagcaccacgacccgaggaaatggcggcgaggcggcggcggcggcggcagcctcaaggaccgggtgctgtcgcgggccttctcggaggagctggagtcgctgatgagctccggggcgaaccacctcttcttcgacccgcgcgggcagttgatccacctgtggagcaagatcttcctcgccgcctgcctcgcctccctcttcgtcgacccgctcttcctctacctcacggggacgaggcagaacatgtgcatcgagctgaagtactcgctggcgttcacgctctccatgatccgctccctgctcgacctcttctacgccgcgcacatcttcttccgcttccgcaccgccttcatcgccccctcgtcgcgcgtgttcggcaggggcgagctcgtcatccagccctgcaagatcgccaggaggtacctcgccggcaccttctggttcgatctcgtcaccgcgctgcccctaccgcaggtaacacgaacacgaacacaaaccaacctgtcggagtcagagcacaggacatgaacggtggtgtttcttggcgtgcgtgcgcgtgctgcagttcgtgatatggattgtgataccgaagctgaaagagtccgcgacggccaaccggaagaacatcctccgcttcagcatcatcttccagtacctgccgcggctgttccagatcttcccgctctcgaggcagatcgtcatggccaccggcgtcatgacggagaccgcgtgggccggcgccgcctacaacctcatactctacatgctcgcgagccacgtacgcgtcactctcacgtcacgacggcgcttgcacatatacatgcacactctacatgtgcactgaacttgttgacagatgttgtgtgacgtacgtgcaggtgctgggagcactgtggtacctcttctcggtgcagaggcaggaggcgtgctggcgagaggcgtgccacgtggagggcccgtcgtgccagaccctgtttttcgactgcaagacggtcagcagcaacaggacgatgtggtacgagctgagcaacattacgagcttgtgcacgcccagcaatggcttctaccagttcggcatctacggcgaggcgctggacaacgggctgacgtcgtcgtccttcacgcagaagtacttctactgcttctggtgggggctgaagaacctgaggtacggcactgatcgatcgagcgatcatagtgaactgaaactactttaaatcacgtcccggttttctgatttacttcgaaaactgttggacagctgcttggggcagaatctgtcgacgagcctgttcatcggggaaataacattcgcaaccgtcattggcgttcttgggctggtgctgtttgctctgctcatcggcaatatgcaagtaatttcctctataccatatcaaagaaatcgtaagcgatgaccactagaactcatgtgcctgacatgaatgcatgtcgtcgtgatgctgtgtctccgacggacacgcgtgcagtcttacttgcaggcgacgatggtgcggctggaggagtggcggacgaagcggacggacatggagcgatggatgaaccaccggcagataccgcagccgctgaagcagtgcgtgaggaggtaccaccagtacaagtggttggccacccgcggcgtcgacgaggaggcgttgctcgaggacctccccatggacatccgccgcgacatcaagcgccacctctgcctcgacctcgtccggagagtaggcaccctgatcaatgcatgcacggccgagctcgggtgctaagtgcgccgctgatgtaaatggtggacgcgtgcttgttattgcaggtgccgctgttcgacgagatggacgagcggatgctggaggcgatctgcgagcggctgcggccggcgctgtacacgaggggcacgcggctggtgcgggagctggacccggtggactccatgctgttcatcatccgggggtacctcgactcgtacacgacgcaggggggcaggtcggggttcttcaactcgtgccgcatcggggcgggggagttctgcggggaggagctcctgccgtgggcgctggacccgcgccccgccgcgtcgctgccgctgtccacgcgcaccgtgcgggccgtgtcggaggtggaggcgttcgcgctcgtcgccgacgacctccggttcgtggcgtcgcagttccggcgcctgcacagcgcgcgcatccggcacaggttccgcttctactcccaccagtggcgcacgtgggcggcgtgcttcatccaggccgcctggcgccggaacaagcggcgccgcgcgtccatggagctcaggatgcgggagggcggcgaggcgcggccgggagggagcgtgaggtgtcgtcggcacagctgcgacggcaaagcgctcatcaagaaacccatggaaccggatttcaccgtcgaagaagaggactga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0627700, RefSeq:Os02g0627700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os02g0627700&oldid=23179"