Os02g0639700

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0639700| Description = UBA-like domain containing protein| Version = NM_001054076.1 GI:115447522 GeneID:4330105| Length = 6620 bp| Definit...")
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Gene Name

Os02g0639700

Description

UBA-like domain containing protein

Version

NM_001054076.1 GI:115447522 GeneID:4330105

Length

6620 bp

Definition

Oryza sativa Japonica Group Os02g0639700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26551875..26558494

Sequence Coding Region

26553184..26553751,26553842..26553867,26554027..26554098,26554690..26554754,26554848..26555086
,26556094..26556182,26556292..26556348,26556709..26556776,26556879..26556985
,26557066..26557136,26557985..26558089

Expression

GEO Profiles:Os02g0639700

Genome Context

<gbrowseImage1> name=NC_008395:26551875..26558494 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26551875..26558494 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcttcgccattcacaaactccatccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgccttttcgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtgatctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttgggactattcatcccccaagtggtaaggcaattgaagaaaacagtacagagagttcaggccaagcaaaatctcgggaaaaaatgcagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatcgaccagggctacagtacctttgatgaatagagcatcaggaaaggaaaaacctccaatggttgagttaccagagtacatgcgggacgattttaatgggaaagttgataaatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctattttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctaggcagctgtggatatgacattaagaagagcatggaggaactgatgtcagtttctacaaaagatacaagcaagaaggcagaagacaaacattatatagcacaggatgcagcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccacctttaggaatggcagtgcctattctttgcgaggcaagagacatagctcaagtcagatttctccaggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaataggaaaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaaccccttgaggacatctcatcagaaactaactgttatccagtgaaagttatccttagcaaagaactagttgcacataatgaggaagattaccagaactatcgtagggctgcgaagcagcattgggatatgatgaagcaatactatgagaaggctgttgatgcttttagggagggtaaccagaaagaagtcgagtatcttcttggggaagggaaacactattacatgatggctcgactggctgatgaaaaatcttctgcggagattgtcaagtcgaaaaaagtagagtcaaagaatgagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaatctcgtgagacttcatcttagacagttgtctaatatcccatcttttgagtacttgaaagtcattactggtgctgaggatggcagtttcaaatcggcacaaagaagaagaaaggtgatgaagtatctggagaagaaatcgattgtgtggactgaagaggaatccaaccctgggaccatcctcatcccaattaatcagaagcaggatcagcaggattag</cdnaseq>

Protein Sequence

<aaseq>MDLRHSQTPSSDDETRALNALLDAFSSAFSLDDIATAYCRANGD VNRAGDLLTELEHPMAKSNEVDSSVGTIHPPSGKAIEENSTESSGQAKSREKMQKSSA SFGTVSSMLGKGSTRATVPLMNRASGKEKPPMVELPEYMRDDFNGKVDKSDSAPKRET LNNRDIEEFLFSMLGEGFKLSMDMIREVLGSCGYDIKKSMEELMSVSTKDTSKKAEDK HYIAQDAAVECSSTKGSCLESQSTFRNGSAYSLRGKRHSSSQISPGELLVSIFTVPER SEEEPIGKRYELGANRNRVPDQKPVVEPLEDISSETNCYPVKVILSKELVAHNEEDYQ NYRRAAKQHWDMMKQYYEKAVDAFREGNQKEVEYLLGEGKHYYMMARLADEKSSAEIV KSKKVESKNELCLDLRGQDPANVANLVRLHLRQLSNIPSFEYLKVITGAEDGSFKSAQ RRRKVMKYLEKKSIVWTEEESNPGTILIPINQKQDQQD</aaseq>

Gene Sequence

<dnaseqindica>1310..1877#1968..1993#2153..2224#2816..2880#2974..3212#4220..4308#4418..4474#4835..4902#5005..5111#5192..5262#6111..6215#tctccagggtatccctgatccctcttctcgtgagttcgcccgccctcgccctcgccctcgccctcgcctgggccgatccccatacatcccgcgagcgcgagcgagccgacgcgccgccgttcgtcctgctgcttccgccgcgtcgtggtgagcacatcatccgccgccgccgccgatccccatccatccttgcgagcgatcaggggcgccgtcgtgttcgtcctgctgcttccgccgcatcctggtgagcacatcctcctacgccgtcgcctgcgccgatcccccatccatcccacgagcgagcaggggcgcttcttccgctgcatccgtccgttgcgcgcatcctctttcccatctctctctacccacgcattttttttctcgaatttgcgttaaaccctagcttctgttctagaaatttgcgaaaaaccttaatacgaataacactttgattgttcccaaaaagtttggtgttaaactttaataccaataacagtttgcttgttcccaaaatgtttgggggttcaactgaacccccatttcccatgttagatccgcccctacccatgtgtttcgaatgttttttttgccatttttgatcagttgttctatttgatgcctccgattcgcttggaagctatatttcggctgatacaggggcgttttgtgtctgatcgcttgtcctctgtttgatctgcagaggtaattgccttgagtagtgtcggattgcagctgcattgcttctgtgatgcttgggggcgttagaacatgatagtattgtgatccttcatgtgtccctgattttctgtcctcaaaccgtgtcagttattgaagaatatttttctacagttcttccttgtgtccaccgcaaatgttttgtgttgatcacagcatcacatgggcgcggatagaacatttgtgggtccctagttgattttttttatgggaaccggggttgagatcatctgtagttcatactgggagtcgtaccacttgacctgctctctctctctctctctctctcttttttttttggggggggggggggttgttctcttacaactttgttcaggaatgtttaggatgaaccacctagccctggatatatttgaaatatcattttgttatttttttcctccctttttttttctggatttcaccttttctgttgaaagttctcagcagttccttgtattcagtattcacagcataactccgagcatcagtacttcgtttcatttggttaatgccagatttttttggcaggttcgacagcattgtttgaggttcttttaaaagtgttctcaccatggatcttcgccattcacaaactccatccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgccttttcgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtgatctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttgggactattcatcccccaagtggtaaggcaattgaagaaaacagtacagagagttcaggccaagcaaaatctcgggaaaaaatgcagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatcgaccagggctacagtacctttgatgaatagagcatcaggaaaggaaaaacctccaatggttgagttaccagagtacatgcgggacgattttaatgggaaagttgataaatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctattttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctaggtaaactcgtgcgtgctatgtgaggccatttccccatattccacttgcttgtttcaagctgtttttaactatctttaatttcttatgcaggcagctgtggatatgacattaagaaggtagtaatcgatcactactgtaaagattatgtattttttgtgttgacactgattgtcgtatatgcatcaaaagggtttagagttaggtcatagggtgcataattcatttaatgtaccttctcatttgcacacctaacagaatcatggtattttatgcagagcatggaggaactgatgtcagtttctacaaaagatacaagcaagaaggcagaagacaaacattatatagcacaggcaagcttaaattttatttttgctacttcaacagtgttatatgactttcttcttcctttgtacttatggattttgcttttgtacctgtacatgttaatttctccatgttgctcggctgaaatatggtgaaaatcttaagtatttatgccccattatatatgttatagtgctttttttatgcagaacttcctttatgcttattttttctgtacatatttttgtactgttccattttacctcaccaattgaaaaattatggtgcttatatatttttgtacatgttatagctagcactcgtgcacttatttattttaatttaatggtacagccctttcgtaattactaattaacataggacttgatatgctgtctcagttaagatgttagatcgctagttccaaatttccaattggtaactgagcaacagaatttgttattggttaatgcttcgaattttttcaatacagctactattgtatgtgaagggagtcagaccactctgttatattaagcaacaatatgcatgtttcatgggtttcatattgtataaacattttaattatatccaccctgtgtcatgtaatggtgcaggatgcagcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccacctttaggttcttgcttcttctcttcattattggtctgttcctatcttcccatcatgaaggctacatctattttactttcatcgacactcttctttgtaggaatggcagtgcctattctttgcgaggcaagagacatagctcaagtcagatttctccaggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaataggaaaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaaccccttgaggacatctcatcagaaactaactgttatccagtgaaagttatccttagcaaaggtatattgttacacacttctgcttccatatttttcgcttttctctgaggaatatactggcgttatattctgtccctttcatcttttattgtaatttctatgcttttttgcatcaacattgtatcctacaacaaaatttactgtttagactgcactatatgagatacctttcaaaagtagtttgcactctgaattacataattctgttcagtaagccaaacataaagttcaagatgatattgtgtgtatagccatgtattcttaatacataatcaggacaaacatcaataccaagctcagttatatttctacatgatatcacatttctttagcctgcaccgaacatttgtggtagaattctgtctcacaagtcctcttttaacaatctgtgatggatgggtaaaattgtaaatgtagtttacctactgtatgttgaaccatttgacttatttagagtttggacataggagtatcatgtccatcacagtattagatctatatggttattctggatggttatagacctacagaatgatagtattaaagatttgcagtgatgtatcaaatggatttttcgctattagttggtttgtacatgctttgcatcttagtactgatgttagcagatttgtttgaactaagtcaaggacaactatgggaactgtttatgttttcctttttcttaatgaaatctttcaaactatgcaagtcagaaagtgatatccattgtgttctatattttcatgaaggatacagaggacacaattgtgattacaagcagaaaatatagtttgaattaatataagcttttgatattttttaatcaaaaccttttgataatttggtgataaaaactgctaacatgaagcttctaatcgactggtctcttaagtcttcacactctgccttaatgcaagatgtttgtcataattgagattttatcatcctgtattccatgaaaagttataatgcattatttgttttgaaattgttttggtttgtatctagaactagttgcacataatgaggaagattaccagaactatcgtagggctgcgaagcagcattgggatatgatgaagcaatactatgagaaggtatgggggcttcatgatgattctttatgctttgatgtttatttcgttttctgcaaacagatcgttttttgttttttccatgttgaagaattttcaatgaaaattccaggctgttgatgcttttagggagggtaaccagaaagaagtcgagtatcttcttggggaagtaagtaatcattttcttgagcaagaactagaggacattatttaatattatagtggggttttgaaccaggggtcttatgcatttttgtcaaaaacgaacctattggtatattgatagaggaatacatatatcttggccagcagagttattatgtatgacagtatgagtgtatgagtgtgactatgggcatcgtcattacgtttgaatgtatgattatttggcctgtctttgagctgcttctattctctaagtaaaaatgtactacatagaaacatttgccagcttgtatatgctcatctgttgatgtaatggccacttctaaaaaaacgactaactggctattctttgttggatatcaaggggaaacactattacatgatggctcgactggctgatgaaaaatcttctgcggagattgtcaagtcgaagtaagtgcgcttcctttctgcattatagctgaaattaatctgttacgtttgttgtttctttttagaaaccttacattaccaagtttatgggtcttcttgcagaaaagtagagtcaaagaatgagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaatctcgtgagacttcatcttagacagttgtctaatatcccatgtgagatgagcacataaatcttttcatttcttgatatatatttttttgcgtagtcttatctaatttacctgatgttgtagcttttgagtacttgaaagtcattactggtgctgaggatggcagtttcaaatcggcacaaagaagaagaaaggtgattttctcaaagttgctttactactactgaattttctgcttcatctgctagttatctgtgtgcatgactcagataccaattattaggctgcactatgttctttatccaaactacaaatatccacctagttatcttggctaatataagcatctagtggcattttgctctataaatctgacatcattagttcattgcactatttaactcagtaatggttatgaccagtcctttagccaaattatggatcaagaaattcaaaaccacacatgtaaaaataaaagagaataaaataaaacagaagtacaccaagggcatgctaaactttaaaatgaagttgtaggtatgggcggtacagagtgatttcctcagctgttttaaagatgtggaagcttgcatgcattcatatgttcagtgtttgttgtcctctgctttgttcttgtccttttttggcagcaagatttttagattagtggacttgtgcctaagttgaacggtttctttatttatcaatttgctggttgagtactctgtaggctttagtttttccattgtggtaataacactgtagcgttgttggtatgatgcgaaaagcgtaatatgcttgaatctctgcatgtacttttgttaagagcttttgcaattactactctttgaactctggaatcttttgccgaagttaagacttaggaggcattaatgcgtaattccttggtttgtactatatgacaaggagagtggctgtttttgactgcaacgtgttgtgcgaaataccacgactttagaattgtaactacgtgctgcacatacatggtattgaactgtctttacgtgatgaatttggccaggtgatgaagtatctggagaagaaatcgattgtgtggactgaagaggaatccaaccctgggaccatcctcatcccaattaatcagaagcaggatcagcaggattaggttcatgtacaaaggtggtggctctcagtgacaaactgacagaagtcgatgttcatagctgcggcatcattgatgtccattttgaaccttactacagtagttctttcccttctccttttgggtatttgaactgtggaagttacgtgcactgcattcgttttgtctgcacattgcagacatttcgaactcattattgccacctcgctagtgccagaaggaagaaagaactgaggccatggtccgacagaaatgcagcagtactagtactagtagtaacattcttgtcatctctagcatcgtgtcactacttaacagcgtccgctcggcagatgaatggtctcacttgtttaacactgatgtgcgcaaaatggcatgctgcatctctgcaaaatgagtcatcgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0639700, RefSeq:Os02g0639700