Os02g0639800

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0639800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001054077.1 GI:115447524 GeneID:4330106| Length = 561...")
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Gene Name

Os02g0639800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001054077.1 GI:115447524 GeneID:4330106

Length

5612 bp

Definition

Oryza sativa Japonica Group Os02g0639800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26558475..26564086

Sequence Coding Region

26558714..26559574

Expression

GEO Profiles:Os02g0639800

Genome Context

<gbrowseImage1> name=NC_008395:26558475..26564086 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26558475..26564086 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagctttgcacgagtggaggcagcgacagcgacaagtctttggcggccggcgatgagccggcggtgagagtccgaggtgaagtggaggcggaggcggcggcggcggcggcggcggcagaggcgcaaggcggtggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcaccccggcggcgacgacgacggaagcaacggcgacgcgagctcgacgaggcggcgtccctgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccgcggccgcggcggaagttccaagagggcccgatccggctcggccatcccgcgccggccgatcgtacatcgggagcccgtcgagcggcagagcgatcggctcggcgacgacgacggaggacaccgacacgggagcacgggatccagcccgccagtccggtcaccgtggcacgccaatcaccacgccgccgccgctagcacgccggcgccggcgccggcgcggttgttcgacgtggtctaccctccaccacctgctgccgtgggcggcgtgggcatgttccactcgacgacgacaacgaccggagggatgctcggagggatggccctggcggtgctcccgtgggtgtcgcgcgggcagtcgccggcgacggcggcggcgagcgcgtactacacgagcccttaccacatgagccccaggctgagacggcagcacatggaggtggagaggtccctgcaccagatatggttcttccttgtcgtgttcgcggtgctctgcctgcttctcttctga</cdnaseq>

Protein Sequence

<aaseq>MDQLCTSGGSDSDKSLAAGDEPAVRVRGEVEAEAAAAAAAAEAQ GGGCFDCNICLDFATEPVVTLCGHLYCWPCIYEWLHPGGDDDGSNGDASSTRRRPCPV CKAAVSPDTLVPLYGRGRGGSSKRARSGSAIPRRPIVHREPVERQSDRLGDDDGGHRH GSTGSSPPVRSPWHANHHAAAASTPAPAPARLFDVVYPPPPAAVGGVGMFHSTTTTTG GMLGGMALAVLPWVSRGQSPATAAASAYYTSPYHMSPRLRRQHMEVERSLHQIWFFLV VFAVLCLLLF</aaseq>

Gene Sequence

<dnaseqindica>4513..5373#accggtttcccttgggcaacgaaagcttcacggcgagcgagggaaagagaagagaagaaaagaaaaaggaaatctctcattcccctcgtcgctccccgcgaggaaggcaaggaaaggcaggaagccgtccacttcccacttcggcctccgcgccggccactgacgtcgacggcgaaccactcgtctcctctcctcttctccctgctgctccgagtcgtcgcctctgcatggagacgggagagagagagacaggggggaggcggacgtccggcgtgcagtacagctgctagctagcttgctagccagtgcaggtcagccaccaaccatactcctgtttgctgattgctccgtgtgctttgttgattgttggtgatgcgatggtgtaatgaactagtgatctcatctgatcgtgttcttggtttttgagtcggcgcctctggtttcttttgctggtgcctgctgttgtttcaatcgatcaggtgaattcttgcgagtttgagtgcatatgattctgtttgtagttgattcagggttggagctttgcccttactgctttttagccatgcttctagatcatttaaaagtagagaaatgaaatgagaaactgattcgcaatggccaatgggccgagttttggtcttggtcaattatgcacccgtgttctttcagacttgttgatggcttgatgcagttgattgcagtatgttatctttgagccaagcacagtttctttataaaatatgaactgtgctaatttggtcaactaatattgttcattgtaggcaggttcgaaattttaagccgtcgtagtgtatgtgtgttaggacaggaaatcatgtcagtgtatctttgttcttggttttcatttaatcaatcaagatacgattactactcttttaggataaactttttttgccgggtcggccgaaggaaccggcgagcgaatttcattaagatttgaggggagaaaaatacaaattttgcttacaacaacaggaggctgttgagatgggaccaaggcttagcctcagccccagtaagctgaaataaaatcaaaccacaaacaaggaaaatgtgctaactattgtttgtctcaaaataacctgcttccttccacagaagaacctcttctttgattgcttcggccaactgttcagggatcctcgaccgctgatcaaacacacgggcattcctctctttccaaactgtccagcaaactagcatgcacacactgtcgaagttgtccctgtagcagtgccgaaaacgcagcctggcctgcatccaccactcagtgagcccaagttcgcttctcccaggaatggggaagggaacgttgatccaattgcgcaacaaactccaaactctcactgtataaacgcatttactgaacagatgtgcgcaatcttcagattctcgtgtgcacagagtgcagcagtcagagtgtggccaacccctcttctgaagattatcagcagttagacagcgcccctttgtggccaaccacatgaagaatcgaattttagatggtgccttcgcatgccatattagttctcccaccgggcacagctccattgatttgaagaacagatcataagctgatgtgcttgagaattggccatctggcgttagtttccatctaatgctgtcttcttcttgacttaggtgtatcgtctgtagctcactccatagctcgaagtattgggctagggcttcgtttgagagggagccacgaagatctctcacccatctgttgcctgttagagcttgtgccacggacagatttgatctgcccacataagtcgatagaatgggccacctccaggcaatgctgcctcccccaagccaatttgaagtccaaaattttgtgttttgtccattcccgacgatgaactcagccattgattggaaaattttctccacttcccctccaagttgaaagtccaccatagaccatggtctgttcttgtgctgtagcttggtgacctgccattttagccgcaatgcatgaccaaagtattccaaattcttgatccccagccccccattttccactggcatacagacgtttttccacgcgaccaagcagtgtccaccgctcacttcctcttgccctttccaaaggaatcccctgcatttgcgttcaatttcttttatcgcccatttaggcagctgaatcactgacattgtgtgtacagggagggccatcattgttgatttgatcaagcataatctgccatcgtgtgatagcatccttggcttccaaccagctaccttttttgcaagcttatcaaggattggttgcaactccatctttgttggtcttctcatggatagcggtatccccaagtatataattgggaattgctctatcttgcagcgaaggatgtcggtgatcaattggagctgctgctcgctacaccggattggtgtaattgcgcattttgccagatttgtcttcagccctgttgtgtcaccaaatcttttaggataaactcataaacatggtagtaattatatgccttggtttctccatcttaattcatttgcatgctaaacagaagtttgttactagttttatgtttcacccatttgttcttgtgatttatctcaaggccgtttacatgtggttatcctttctttgatgggaagtgtaactgacagccttaaccctattggaaaattagaaggaataattaagatgttgcttccactctttacttacacgtcgattgagtatacctgataaatgtgtagatggaatgattcttgtttggtactaatccgaataacctatatctgtgtaagtttaatcatattgatattgtggcacacaaacaatttgacaatgaaaagctgcatcaatgcaactaagctttgcacagttctactgaacttttctgcttgtgcatttttatttgtagccttggggtaccattagcaattttgtgatgtatcttggttgatctcattttcatgattcgtactattcatcagtactttgtttcttggccacaaaaacgctagctggacaactgtagaaaaacgacgtgcttggagctgtatgtatgataaggaaaggagagaaatgcatataggcaccttagttctgactgcacatatcgtctgtggatatgggctaatattatttaagaaaaaacaactccaagttgttggccgaatatttgttgtttcctgatcttatcacaagattgaatcatcatcttccctgatcactagatatgatttaaaactatataataagaaatgatgtgcttttctctttggttttgttcagtcgcttgaatacgtcaagtgctacatatggagtcaggaatctagttattccatatattattacaccacttcatcgtttgcttttcggtttattaacatagataaagaaccgattgacggctcagtttctttgaaggaaaaaaaaacacagagataatcatacttatggagcaagatcaggttgggctttggggtcggcaagctgtcttcttctccgtacaattcgctgtgtggtcactgatcatctcttattttttcttgacaaaaaatagtggtgctaatccggtcagtgtttcagcgacctggtggcgttgtccaaattaaatcgagcgtaagcagattataaatgccggattgcttaattgctttcttctttgctttcctctcaaggcaatagcaagtctattttctataaaaaacaaaggcaaactctcttcttcttgttattgtttttgcaaagataaacaaatgcaaaattcgggttgataattacgggttttgacctgtaagattcttgtatccacttcaggttgggcaatcagactagttttaccgactggtgtggtgaccggtgaccgtgtaaatccgcaatgcaatcaatcatcaatgacatttctacaatcgaaccaccgtagtggatgactggatgtgatagcaacatatagatcgaagctaaactagtagtatgaccgaacaattttttttagaaaaagtaaaatttaatcaatagtagttttcttatacaatttgccctgtggttgtttatatttggtatggaggcatggagccttatttaaatcctctgctttatctgaaaatatcttgtctgatcgacgtgggaccttctggatttggacagactagttaggactaaacaacgtcctcagacagaaaaccctacggttttggtcttcttgtggttagttccactgtccatttttgctgccagcggcctatcaccagcacacgaaccggtcgcacggacaaaacggtacaacttgctttgcctgaattctgaccggtcatcgtacacgtttcggtgaccaatcatggtgagggattggtgtggacagtgtgcttgtttttctctcttgctcgctgatcaatccatcttcttttgtcgtcggttataaacttataatggtctgacattcctgttagctttgcagcccggcgaaccatcgatataaggaaagattttgtttgatcgaggtggggatggatcagctttgcacgagtggaggcagcgacagcgacaagtctttggcggccggcgatgagccggcggtgagagtccgaggtgaagtggaggcggaggcggcggcggcggcggcggcggcagaggcgcaaggcggtggctgcttcgactgcaacatctgcctggatttcgccacggagccggtggtcaccctctgcggccacctctactgctggccctgcatctacgagtggctgcaccccggcggcgacgacgacggaagcaacggcgacgcgagctcgacgaggcggcgtccctgccccgtgtgcaaggccgcggtctcgccggacacgctcgtgccgctctacggccgcggccgcggcggaagttccaagagggcccgatccggctcggccatcccgcgccggccgatcgtacatcgggagcccgtcgagcggcagagcgatcggctcggcgacgacgacggaggacaccgacacgggagcacgggatccagcccgccagtccggtcaccgtggcacgccaatcaccacgccgccgccgctagcacgccggcgccggcgccggcgcggttgttcgacgtggtctaccctccaccacctgctgccgtgggcggcgtgggcatgttccactcgacgacgacaacgaccggagggatgctcggagggatggccctggcggtgctcccgtgggtgtcgcgcgggcagtcgccggcgacggcggcggcgagcgcgtactacacgagcccttaccacatgagccccaggctgagacggcagcacatggaggtggagaggtccctgcaccagatatggttcttccttgtcgtgttcgcggtgctctgcctgcttctcttctgagagcggcgcacaccagatgatctgcaccttccaggagatccaagttgtactcctaactttcgtgtacataggtcgtgtacataggtaaaaaaaaaaaaggtgcgtcatgccgcccagtaggcagtagcagttccgtactgccgtgccatccaaagcaaccctcttgcaactcctcgagcatgttctgatttagggcgctgcttaagcaaaggccaatgtgaatcgatgactcattttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0639800, RefSeq:Os02g0639800