Os02g0643200

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0643200| Description = YABBY protein family protein| Version = NM_001054094.1 GI:115447558 GeneID:4330130| Length = 3046 bp| Definition = ...")
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Gene Name

Os02g0643200

Description

YABBY protein family protein

Version

NM_001054094.1 GI:115447558 GeneID:4330130

Length

3046 bp

Definition

Oryza sativa Japonica Group Os02g0643200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26726398..26729443

Sequence Coding Region

26726782..26726877,26727079..26727150,26727449..26727524,26727654..26727702,26728194..26728380
,26728532..26728708,26728887..26729000

Expression

GEO Profiles:Os02g0643200

Genome Context

<gbrowseImage1> name=NC_008395:26726398..26729443 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26726398..26729443 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcctcgtcctcgtcgtcggctgtcttcccactggaccacctcgcggcgccgtcccccaccgagcagctctgctacgtgcactgcaactgctgcgacaccatcctcgccgtcggcgtgccgtgcagcagcctgttcaagacggtgacggtgcggtgcggccactgcgccaacctgctctccgtcaacctccgcggcctcctgctccctgcgccggcgccggcgccggccaaccagctccacttcggcccttccttgctctcccccacctccccccatggcctcttggacgaggtggcgttccagacgccgagcctactgatggagcaggccgcgagcgccagcctgagcagcatcacgggccgcagcagcagcagctgcgccagcaacgcgccggcaatgcaaatgcctccggcgaagcctgtgcagcaagagcctgagctgccaaagaacgccccggcgtccgcgaacaggcctccggagaagcgtcagagagtcccatctgcgtacaaccggttcatcaaggatgagatccagcggatcaaggccggcaacccggacatcagccaccgggaggcgttcagtgcagccgcaaagaattgggcccatttccctcacatccattttggcctcatgccggatcaggggttcaagaagaccttcaagcctcaggatggttctgaagacattcttctcaaggatagcctgtatgctgcggcagccgccgccgccgctgcagccgcaaacatgggcgtcactccgttctag</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCS SLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAF QTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRP PEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGF KKTFKPQDGSEDILLKDSLYAAAAAAAAAAANMGVTPF</aaseq>

Gene Sequence

<dnaseqindica>2567..2662#2294..2365#1920..1995#1742..1790#1064..1250#736..912#444..557#atgctgcctcctcgccacctctgcctttccctctttgctcgcggcaaaatccacatgcagttgtagacttgtagtagtagttagttgtggttgtttgttgttttggctttcaaatcaggaacaacgacagatccgaggctttctcgaatcgggcaggtccatcaaatcggaagccagccagccatctaatcacctcatcacatcaaaggggaccaaaaggatatctctggtggctaccccctctcctccggccactcgtgtaaaatttcccttctgatcctgcgctgtgccagattataaggccattgcgtagctcgatcgaagaaagaagcaggccagccacagtactgcctctcttgtcgatcgatcgacagccacagcctgcaggtgtggggattcggctggccgtcgccttcgtcttcgtcttcgtcgtcgtcctcatcatgtcgtcctcgtcctcgtcgtcggctgtcttcccactggaccacctcgcggcgccgtcccccaccgagcagctctgctacgtgcactgcaactgctgcgacaccatcctcgccgtacgtgctgtggcgccgatcgagctagccacctacctaccgacagcgtgctagcttcagagcttcttagcattaattcttcgtttgttagttcgtttcttgttttgatcgatcttttgtttctcttgatgcatgactaacctgtgagtccccgtgcccaacttcgatctccacgcaggtcggcgtgccgtgcagcagcctgttcaagacggtgacggtgcggtgcggccactgcgccaacctgctctccgtcaacctccgcggcctcctgctccctgcgccggcgccggcgccggccaaccagctccacttcggcccttccttgctctcccccacctccccccatggcctcttggtatgtacccacctaacttgctctatatatctctctcaaatcctcccatgctagctctcacgttttagtgaggtgctcagctgagaatcatacattatattcatactgacgtttagctctcatgggtgtgactgtgtaatttccggtgtaggacgaggtggcgttccagacgccgagcctactgatggagcaggccgcgagcgccagcctgagcagcatcacgggccgcagcagcagcagctgcgccagcaacgcgccggcaatgcaaatgcctccggcgaagcctgtgcagcaagagcctgagctgccaaagaacgccccggcgtccgcgaacaggcgtaagtacagtactactactacaagcttggtgttctttctttgaaacgctagaattttgtagtcaaaggtacttatgcaccacagtgtgttctcctgctagcttgttgcttattcaccgttgtttgggaggtttaagaacagaaagcttgctaagaggggttaattagctacttatagctcctacttaggcatatatgcacacattagcgtactagtgtacgtgttgaatttcaaatttcaatccagtgtttctttcgagtgtgtgaaattaatatgtactatattcacttgaagaacgctcctcagcactagaaatgatagtacagatcaacaaggcatgcgatcatgtcttgttgtggcagggccatgtaagcccatgcttcgatcgatccggtcagtatttgcagacagcatgtatactgatagcttaggtgagcttacccatttgtccatgtttcctcggatgctgtctgatccaaaacttttgcagctccggagaagcgtcagagagtcccatctgcgtacaaccggttcatcaagtaagatttctctataaaccttctgcctaattaaaactgatggatcctcctttgagctttggttaatcagtattcgtggtatcatctcgtaaaaaaaattaattctgcttataatgaattgctacacagggatgagatccagcggatcaaggccggcaacccggacatcagccaccgggaggcgttcagtgcagccgcaaagaatgtaaactttcttcgtctgatccgcgcattaatgaactcctactcatcctgtagtatctagcttgatgctagctgttcgcgtgtcttgatttgactggacaccttacattgtcagcacggacacagcggcagcttgtgcccggccgcttgcgagatgccgagagcaagcggctgtggtttctgggagcttttagccccacagctgctatagctagggttcgttcggatttgtttcgatctcctttactgatccaaacctgcctttgctttggctttactttccttgtgcttgcaatcagtgggcccatttccctcacatccattttggcctcatgccggatcaggggttcaagaagaccttcaagcctcaggtaaccagaatcccgagagaattaacgtatactactatgggagacacaagcataacctagttatctgtgtaacctgaacactcatatagccttatcagaattcagacccacccggcaaacactgcatatgcactgctcttatttactttagtgctttgcgagcaattcatctgtagccgcttcctgtgtcgtgattttcaggatggttctgaagacattcttctcaaggatagcctgtatgctgcggcagccgccgccgccgctgcagccgcaaacatgggcgtcactccgttctagcgagctttggcaaagcggccgcaagcaccgaattcttggtggtggccctagctcgctctcatgtgtggcgccattctagctatatagcaagggtttaattagcatcagatcatcatctcttaatatcatgtgtgttgcttaattagagtacttctgagtgtgtagaagagagatggggaatcctgttgagtgcctaggtttatgcttataaccatattcctcgtagagacttttttccctgtttttctcttttcttttccttctttatttttttatcctttctttctttcaggactatcttcgtactccctattcacctgtagagtgtagagaagttgctgttccgttgcctgattgtgtcccaaaagacgtgtcttaattacg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0643200, RefSeq:Os02g0643200