Os02g0643500

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0643500| Description = Pentapeptide repeat containing protein| Version = NM_001054095.1 GI:115447560 GeneID:4330131| Length = 3386 bp| Def...")
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Gene Name

Os02g0643500

Description

Pentapeptide repeat containing protein

Version

NM_001054095.1 GI:115447560 GeneID:4330131

Length

3386 bp

Definition

Oryza sativa Japonica Group Os02g0643500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26742504..26745889

Sequence Coding Region

26742523..26742863,26742954..26742983,26743695..26743801,26744252..26744286,26744678..26744806
,26745471..26745662

Expression

GEO Profiles:Os02g0643500

Genome Context

<gbrowseImage1> name=NC_008395:26742504..26745889 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26742504..26745889 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctccccaccacctcccccctcgccgcggccgcagcgaggccctgcgcgttcccgacgccgtggagatgtcgctcgccccctcttcgccgcctcccgcacgtctcctgccaggcgaaccgagggggttctcgggacggcaattcgttgagcacctcggcggcggcggcggcggcggcgtcgccgccgccgaggtggcgtgccgcggtgtccgcggcgctcgcggcggcgattgtgtccgcggcgccggcctacgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctgcgcagtttgggtcggccgacctcaagaaggccgtccatgttaatgagaacttcaggcgggcaaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattcaatggtgcctatcttgaaaaggctgttgcttatagagcaaattttactggtgcagatttgagtgataccttgatggatcgcatggtgctcaatgaagctaaccttacaaatgctgtgcttgtacggtcagtccttacgcgtagcgatcttggtggagcaatcattgaaggtgcagacttcagtgatgctgttattgacctgacacagaaacaggctttgtgcaaatatgcaaatggaacaaaccctttaacaggggtcagcacacggaaaagccttggatgcggcaacagtcgccgaaatgcatatgggagcccttcctcccctcttttgagtgctccaccacccaaacttctggaccgtgatggtttctgcgatgaagcaactggtatgtgtgacgcaaaataa</cdnaseq>

Protein Sequence

<aaseq>MALPTTSPLAAAAARPCAFPTPWRCRSPPLRRLPHVSCQANRGG SRDGNSLSTSAAAAAAASPPPRWRAAVSAALAAAIVSAAPAYADLNKFEAEQRGEFGI GSAAQFGSADLKKAVHVNENFRRANFTAADMRESNFSGSTFNGAYLEKAVAYRANFTG ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLTQKQALCK YANGTNPLTGVSTRKSLGCGNSRRNAYGSPSSPLLSAPPPKLLDRDGFCDEATGMCDA K</aaseq>

Gene Sequence

<dnaseqindica>20..360#451..480#1192..1298#1749..1783#2175..2303#2968..3159#gcgcgcacacgcccccgccatggctctccccaccacctcccccctcgccgcggccgcagcgaggccctgcgcgttcccgacgccgtggagatgtcgctcgccccctcttcgccgcctcccgcacgtctcctgccaggcgaaccgagggggttctcgggacggcaattcgttgagcacctcggcggcggcggcggcggcggcgtcgccgccgccgaggtggcgtgccgcggtgtccgcggcgctcgcggcggcgattgtgtccgcggcgccggcctacgcggatcttaacaagttcgaggcggagcagcgtggggagttcggcattggctccgctgcgcagtttgggtcggccgacctcaagtacgttacgcgggctcctttcccctttcggatcctttcgttttgcctcgtgtcgctgatattcttcgccccgtgcttgtatcattgcaggaaggccgtccatgttaatgagaacttcaggttggatgcctaatttcacaaatcccaaattagtattctttcgtgctgcggtgctaaatgtttgctgcttaccataggttttatgtaataattgaaccaaatgaatcctgtgtttccaatttcagctataaacagaaattccatttggtctatgcctgtttgggttataaagtaattttggttctctgcaagtgttgatacaaacttttctctagctcatgcttatgctgttatatcatcatcttagtattctggatagatagacacaatctctggagtccagtgggttatgcattttttttcaagcattgattccattgcaggctatagataagacataaaagctcttgcagtttaaagtttgcttagttaagcagttttactatagtactatcatattggcatttattgcttaacatattggcatttatgtggagggtggaagattaaaatagtaatatcgcaaaatagtaatcagccacataaaaaacaatctgtagatgagcagccaattttgaatctttaccatcactgcttcagcttggcatggttgtccacctttagcatatattacaattctctgcatatgaaagatatattgatatgcttaattaataggttgggtaccctcaatttctgttatgaattttccctatggctcaagaaagagatcattttttttcctttttaatacaacatttatcaatataggcgggcaaacttcactgctgctgatatgagggagtcaaatttcagtggttccacattcaatggtgcctatcttgaaaaggctgttgcttatagagcaaattttactggtaagtgaaacaacatcttttcagtatgtggatgtgtcaaactccctccaagaagttattatacactcatgcttgatgcaaataattacccctgttttgtgcctttgtggttagtagtcctgtactctagtgatatgccttaacagggagacactgcactagagatatcatagagagcccttgtttgaactccactaaggccttcccagtttaaactctgatcaggaggcaaacaataaacttcattttcttttgttccaattggaaccaacatggtacttaggtctttgttattgttagtgaaagcaattgcagaagtagagtcctgcatctgatttttcaaaatccttgtaacttttgactgcatctgaatggttacagaatacttcaaccttcccatgcagttatttatgacacaatttcactgtactattgtttggtcttttgcaggtgcagatttgagtgataccttgatggatcgcatggtaaacctacaacttctttatgtcatgtttttcttgtgcaaagtatcttctgcaaatacatgtatatagttatggacttgtgatgctcaagggcatatgggtgatgcacttagttgtgcaaatgcggaatttgacatcagtgtgttaaaagagataatgcatcagaattcttgatcagtgtagtaaatgattcatatattagttttggtgctaaatgcttatgaatgcattgttactttcaatatgaagccaggttcaatgtaccagtttttaaggcaactactggagtctcctgttcttaatttacaacatcgtttagttcttcaggaataataatttcaaggcaaagtaacctttaagcatgtattgaaagtttgtatgttattgacaggtgctcaatgaagctaaccttacaaatgctgtgcttgtacggtcagtccttacgcgtagcgatcttggtggagcaatcattgaaggtgcagacttcagtgatgctgttattgacctgacacagaaacaggtacatgaaacttgaatgacactactatcacgtgtagtaattatcaaactaaggtttatttttgcatgttccacgggtctgtttgataagcagttgagcatgtcagattctaaaaatgttccttttatttttcttccacgggtttttcttctttgacgtgtttgataagcagttgagcatgtcagattctaaaaatgttccttttattatggatgcttgctgtctgattttggtattactaatttttaaacactggccaacgaactgtgtatggatgcagaagtaagtgtcatggaagagaaaaccgaatattcagacaagagaatcttgacatgaacttgactattatctcctggctgttatgtctcatgtcttcgggaaggaagttccatgtgctcaactgctaacaacacaatctttagcttgaacaaacattgcataatcctaatgtcccgcatctgtgacatatgaatttgaagttgagaaccggtgccatactgtttcagcagtggtcaaaactaattttggatgatacataaaagaatcaccatatgatgccatgttggggtctatcttcaatgttttgcatgagttctctgattctcttttatacagaaaacaaaagataatcctgataactaatattaggcaaactggtatgtaggctttgtgcaaatatgcaaatggaacaaaccctttaacaggggtcagcacacggaaaagccttggatgcggcaacagtcgccgaaatgcatatgggagcccttcctcccctcttttgagtgctccaccacccaaacttctggaccgtgatggtttctgcgatgaagcaactggtatgtgtgacgcaaaataaaagaagaattatccagcatactgcagaaattgagcactgaatgctgtatatacattggagactgaacaaaagacaaagcagatcggttcaggattcagagaaattgttctcgttttgcgaatgttgtagcattgcagagagatcaggtaaactaggactgtagacaagttatgtgtactgaacgactgatgccgtatatatatgtatatcaaagtgttgccgaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0643500, RefSeq:Os02g0643500