Os10g0429500
| Gene Name |
Os10g0429500 |
|---|---|
| Description |
TRAF-like domain containing protein |
| Version |
NM_001189237.1 GI:297727604 GeneID:9271421 |
| Length |
6718 bp |
| Definition |
Oryza sativa Japonica Group Os10g0429500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:15728848..15735565 |
| Sequence Coding Region |
15728848..15729186,15729225..15729924,15731210..15731505,15731532..15732002,15732067..15732378 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:15728848..15735565 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:15728848..15735565 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtccaccgctggcggctgtaagcattcgcgttccgcctccgccatcgtcgcaggcgccgcgagcgggtaccatctcctcaagatcgacggctactcgcgcatcaagggcctacccaccggcgaggccctcaaatcttgcgccttcaccgtggggggatatcgctggcgcatccattgctaccccaacggcagcaaatcagattactcggatttcatatccctgtttcttcatctcgacgacggacaagtcaccaagcaggtgaaagcgcagtacctatttcgtttcttggacgagttggatgacaagccgccgccttctcttacctcagagcaattcatcaagcgggaagcattggagaaatcggagcatctgaagaaagattctttcaccgtgcggtgcgacatcatcgtcaccaccgggttccgtgcggaggaggagacggccgaggcgcaaagaccacggaaggcgaacttcgtctccgtgcctccgtccgatctgcagcggcatctgggggatcttctccacaacgagaagggcgccgacgtggtgttcgaggccggcggcgagactttcgccgctcaccggtgcgtgctcgcggcgcggtcaccggtcttcagcgcggagctgtttggctcgatgaaggagagcgacgccgcgggtgtcgtccgcatcgacgacatggaggctcaggtgttcaaggcgctgctccgcttcgtgtacaccgactcgcttccggagacggaagaggaggagcaagacaccatggctcagcatctgctcgtcgcggcggacaggtacgccatggagaggctcaagctcatctgcgaggacatgctgtgcaagtacattgatgtgggcacggtgacgaccatcctgacgctggctgagcaacaccactgcgaagggctaaagaaggcatgctttgatttcctcagctccgcggtgaatctgaaagcagttgcttctggcgacggcatcgaggatctgagtaaaagctgcccatctcttatgaaggagttgattgccatgctcgacggcatttggatggatcgattcgtcggcccatccgtccccaacccaccaccagcgcaagcagccgtgctcggtcgtcgacggctccacgcgcggtcgccgtggctggaatcgttgtgccctactgctgagcctcgtccggtggtcgtcgtggtcagcctggggctgttaggcacgcggagaaatcgaccactcgtcacgggagctgctgaaaaggcgaatcgaggccggagaaaggggattctctggcggagttaccatcaagccaggcggaagtcggggagcgctgccggtgttgctctgcagctttggccgcatgcggctgtactcggtggagcgctctcgggtgtcacagtgtcgtcaagattcggcagagttggaagctttcttctcgcctccggcctcctatttgaggcctccttctccgggtggacaatgggcaccaggggaacaaagcggaagagaggggaggacatccatccgtcgactgcagccaaggggcaggctgtgcctttggcgttcgccgcaccggctcctcacggactgctcatcaatctggattcggggacggggtcgagcgcctctggcaaatctgacgccagctctgcccctccttgtgacaatgacatcaatgtggccgcccgcttcctaacagccgtttgtgcgacctccccaaaaggcgttcgctctttcgtccgtcgtgtgtcgccggcgacggttgttcggtccctcgatttggacctgatccggcccatctcgccacaaaagatggcggagggtaaaatccgatggagcgacgatgaaattggcatatttcttgaggcatgcttggaggagttgtccgcaatgaccataacatccacttgtccaaagccgcaaggctacaagaacctcatacagaagatgaaggagagaatcggaagaaacctcaccaaggatcaggtgaagtacacatggcgtcaatgtcgtaaaaggtggatgctttggacgtggctggaatcaaaggctaccggcattggccgtgacccgataactcaagccattgttgctgacgacgattggtgggaagacaaggaccagaaaaaggacggagctcgtgtcttcaaagattcccctctcaagcacatcaaccttcactgtgctattttttcggggtgcacagtggtagggaaccactctgctattgcaggcgcagcaccagcacctcctcagcagccaactccaaggcccaacatcaatatctcacagctgctagctcaacaacaaaacattgcgactccaggagtttcaagtgcaggaaaaggcaagaggctagcagatgaagctggcacttcgaggggatcggcttcaaagaagagtcgaagtgactcagccggtgatgccctgcaccggctagctgatttgcgagtggagtcgatggagagctgttcccggaaggtggaagaggacagggctagaagtgcagcagcttgcatccagttggtggtagctgatggacataacccatggagtgatttattctttatggcactggatgtatttgagcgtgcttattggcgtcaatggttcattgattactgccctacacccgagtcacggtcccattacatagtacagacatggcaaaagcaatttggcggaaaaggagctggtggccaaggaggtggacagcctggatacgaaggaggaactgggcagcagcgttatggtgtaggagcacccccgccaactggccagcagggttatggtggaggagtacccccgccaacttgttcaggaggtcatacagggtttggaggttggaatcacacaatgagcgacggttcatcgtggagttcggatggtactgaagggcaatacacgagcgatgaggatgacgctattattgcaatgatgcaagagattttagctgctcctccaagagctcctcgtcgtgtcccaacccaatttggaataacttggatgctagagacaatggcgaatcctgcacagtgccgtgcgattttccgtttaacggaatatcagatatacactctacatggaattttggaaaatgccccttacaacctgcatgggagtaatgattttgctgtaggtgctgttgacggcacacacattccggtcactgttggtgtggatagtgccatagaacacatgaatcgccatgacgagacaacaaaaaatgtcctaacaattgttggattcgatggtagagttatatttgccgatgccggatggccaggatcagtgcatgacaatcgagtcctaaacgaagctattgactcttatccagaggagtttccaagactaccttttcgcataccgtacaacccatataagaatgtccagagcgacataatattggcagcgttttgtttgcacaacttccgaatcgacagcaagcaaaatgactaccaggccaataaccctctgtataatggtaatcctatagcaccaatggcaccccccttctccaatatgtattacgccggcaatagcacacaagcgatgaacgcatactgtgatgccattgccaattcggtggagaacctgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MASTAGGCKHSRSASAIVAGAASGYHLLKIDGYSRIKGLPTGEA LKSCAFTVGGYRWRIHCYPNGSKSDYSDFISLFLHLDDGQVTKQVKAQYLFRFLDELD DKPPPSLTSEQFIKREALEKSEHLKKDSFTVRCDIIVTTGFRAEEETAEAQRPRKANF VSVPPSDLQRHLGDLLHNEKGADVVFEAGGETFAAHRCVLAARSPVFSAELFGSMKES DAAGVVRIDDMEAQVFKALLRFVYTDSLPETEEEEQDTMAQHLLVAADRYAMERLKLI CEDMLCKYIDVGTVTTILTLAEQHHCEGLKKACFDFLSSAVNLKAVASGDGIEDLSKS CPSLMKELIAMLDGIWMDRFVGPSVPNPPPAQAAVLGRRRLHARSPWLESLCPTAEPR PVVVVVSLGLLGTRRNRPLVTGAAEKANRGRRKGILWRSYHQARRKSGSAAGVALQLW PHAAVLGGALSGVTVSSRFGRVGSFLLASGLLFEASFSGWTMGTRGTKRKRGEDIHPS TAAKGQAVPLAFAAPAPHGLLINLDSGTGSSASGKSDASSAPPCDNDINVAARFLTAV CATSPKGVRSFVRRVSPATVVRSLDLDLIRPISPQKMAEGKIRWSDDEIGIFLEACLE ELSAMTITSTCPKPQGYKNLIQKMKERIGRNLTKDQVKYTWRQCRKRWMLWTWLESKA TGIGRDPITQAIVADDDWWEDKDQKKDGARVFKDSPLKHINLHCAIFSGCTVVGNHSA IAGAAPAPPQQPTPRPNINISQLLAQQQNIATPGVSSAGKGKRLADEAGTSRGSASKK SRSDSAGDALHRLADLRVESMESCSRKVEEDRARSAAACIQLVVADGHNPWSDLFFMA LDVFERAYWRQWFIDYCPTPESRSHYIVQTWQKQFGGKGAGGQGGGQPGYEGGTGQQR YGVGAPPPTGQQGYGGGVPPPTCSGGHTGFGGWNHTMSDGSSWSSDGTEGQYTSDEDD AIIAMMQEILAAPPRAPRRVPTQFGITWMLETMANPAQCRAIFRLTEYQIYTLHGILE NAPYNLHGSNDFAVGAVDGTHIPVTVGVDSAIEHMNRHDETTKNVLTIVGFDGRVIFA DAGWPGSVHDNRVLNEAIDSYPEEFPRLPFRIPYNPYKNVQSDIILAAFCLHNFRIDS KQNDYQANNPLYNGNPIAPMAPPFSNMYYAGNSTQAMNAYCDAIANSVENL</aaseq> |
| Gene Sequence |
<dnaseqindica>1..339#378..1077#2363..2658#2685..3155#3220..3531#4299..5020#5436..5718#5950..6181#6480..6718#atggcgtccaccgctggcggctgtaagcattcgcgttccgcctccgccatcgtcgcaggcgccgcgagcgggtaccatctcctcaagatcgacggctactcgcgcatcaagggcctacccaccggcgaggccctcaaatcttgcgccttcaccgtggggggatatcgctggcgcatccattgctaccccaacggcagcaaatcagattactcggatttcatatccctgtttcttcatctcgacgacggacaagtcaccaagcaggtgaaagcgcagtacctatttcgtttcttggacgagttggatgacaagccgccgccttctcttacctcagagcaagtacgcgtcttcggtagcggcggttgggggaaacaaagttcatcaagcgggaagcattggagaaatcggagcatctgaagaaagattctttcaccgtgcggtgcgacatcatcgtcaccaccgggttccgtgcggaggaggagacggccgaggcgcaaagaccacggaaggcgaacttcgtctccgtgcctccgtccgatctgcagcggcatctgggggatcttctccacaacgagaagggcgccgacgtggtgttcgaggccggcggcgagactttcgccgctcaccggtgcgtgctcgcggcgcggtcaccggtcttcagcgcggagctgtttggctcgatgaaggagagcgacgccgcgggtgtcgtccgcatcgacgacatggaggctcaggtgttcaaggcgctgctccgcttcgtgtacaccgactcgcttccggagacggaagaggaggagcaagacaccatggctcagcatctgctcgtcgcggcggacaggtacgccatggagaggctcaagctcatctgcgaggacatgctgtgcaagtacattgatgtgggcacggtgacgaccatcctgacgctggctgagcaacaccactgcgaagggctaaagaaggcatgctttgatttcctcagctccgcggtgaatctgaaagcagttgcttctggcgacggcatcgaggatctgagtaaaagctgcccatctcttatgaaggagttgattgccatgctcggtaactttgttccgtgaccgagttttagtgatatatatcctcacttttgtcatcagatagttttagcaatcatggttactgtttctgaacttattctatgaaaccccttaaaatgggggtgggcagatgaccaattgaccatagtttatcggggtgaaaaggttgccaaattctctgttttgttagttcattgcatctctacaactctatggatagaagaatgataactaaatctcctatgggcttttatgttggttggatgttgcctttatgtgccttgaattctttggtttgctaaggacatacgcaaataaataatcatgttttgctgttagctagttagctggtaaactagaattactctgttgtggaattaatttcatcacttcagttggactcaagttttcaaccgaaatctaaaaggacagccaatgaaacttaattgcacctccaccaataatgtagaatgtacatttacaaagacccactctgtattgagtgatactccgtttcaaatatggtagctcatggtttgtaggcttttttcatcaggcagtttaagcaatgttaattcctattttctagacatgttttatgcttgttgactgtgtccctaggatactgctaattaaattgatgtctgattgctcggtaacttagctccgtgactccatatttttgccatcagatagtttttgcaatgatagttcatgtttgatagcatctctacaatagctacagattaatcaagaatgaatttgttatcagagagccatgataactgaaactccaccaggccttcatattgatcaaattttctctgctttttagttcattgatctctacagttcaacagataaatgaggtatgaatttgttaccacactgctatgagaacttcaaaagaatttgggtggcagtctggcagagtattaaccgtgttcctgtattttctttttcttgtagtgaagcaaccaatgctctaatctacaaaaaaggtacttagtgtaaattcttaccagtatgaaatacaaaaaattatggcttatataagcataatagttgtagtaatttatctacgttaatctaataattaaaaaataaagtaaactaaacggtacacttcatttgttgtaaagttgcactcttttatgttgtgtaaggccgcgttcgatagcgagagatcgaggggatttggtgaattgtgcactattcagcactgtacatgtctgaataatttactgcatattaaatggcgttggtgactaaacgtggcacctgtacagacggcatttggatggatcgattcgtcggcccatccgtccccaacccaccaccagcgcaagcagccgtgctcggtcgtcgacggctccacgcgcggtcgccgtggctggaatcgttgtgccctactgctgagcctcgtccggtggtcgtcgtggtcagcctggggctgttaggcacgcggagaaatcgaccactcgtcacgggagctgctgaaaaggcgaatcgaggccggagaaaggggattctctggcggagttaccatcaagccaggcggaagtcggggagcgctgccggtgttgtctgcgtcacctagctgctcatcaggctctgcagctttggccgcatgcggctgtactcggtggagcgctctcgggtgtcacagtgtcgtcaagattcggcagagttggaagctttcttctcgcctccggcctcctatttgaggcctccttctccgggtggacaatgggcaccaggggaacaaagcggaagagaggggaggacatccatccgtcgactgcagccaaggggcaggctgtgcctttggcgttcgccgcaccggctcctcacggactgctcatcaatctggattcggggacggggtcgagcgcctctggcaaatctgacgccagctctgcccctccttgtgacaatgacatcaatgtggccgcccgcttcctaacagccgtttgtgcgacctccccaaaaggcgttcgctctttcgtccgtcgtgtgtcgccggcgacggttgttcggtccctcgatttggacctgatccggcccatctcgccacaaaaggtaatgcccattgtaatttgtttttgatccattgcatttgtgctttgttaacattgggtggtagatggcggagggtaaaatccgatggagcgacgatgaaattggcatatttcttgaggcatgcttggaggagttgtccgcaatgaccataacatccacttgtccaaagccgcaaggctacaagaacctcatacagaagatgaaggagagaatcggaagaaacctcaccaaggatcaggtgaagtacacatggcgtcaatgtcgtaaaaggtggatgctttggacgtggctggaatcaaaggctaccggcattggccgtgacccgataactcaagccattgttgctgacgacgattggtgggaagacaaggaccaggtatgtcacctacccttatgttgtgttcggtcgaactaggaagatagtgatttccatactgatttgcattaacacaaggacccatgacatttgtttagttcatgaaatctccacagttatctatttttaggtataatcatacatattgttcatagaaagtgttatgtacctttgtaaaaccttgtgtttctaggctacaaaatcagaatgtaatttttttgctataatgaatgggggtacaatttctctgctgcattcactaccttccaataaattgattaggaagcagcaaatgcatggttggtactatttttattattctcttgtaggtcttttcaacaaaactgagccatatcttgagatatttggtattcctatgctattgttgatgccatagtttgacatgacatcaacctctatgtgacatgtcacattgcttacatggcataaagttttttgatttttagtctgctcatcatctgctattattgtcaatgcatatcaatatcatatagtacttcctccattttcttgaattagttagaccgtaaaatctaggtaaaatgttacctgcagtctgcagatgttaaaacatggtgccaccaataatagctatgttgctgcgtacattagttatgtacttgtatgctgctgtcttttttttagttcaaaaagcgtcaacaaaatgcaaaaatgaaaatcgatttaagaaactacttatgttcatttcaatgtaaatttattttgttactcaaccattttcgcagaaaaaggacggagctcgtgtcttcaaagattcccctctcaagcacatcaaccttcactgtgctattttttcggggtgcacagtggtagggaaccactctgctattgcaggcgcagcaccagcacctcctcagcagccaactccaaggcccaacatcaatatctcacagctgctagctcaacaacaaaacattgcgactccaggagtttcaagtgcaggaaaaggcaagaggctagcagatgaagctggcacttcgaggggatcggcttcaaagaagagtcgaagtgactcagccggtgatgccctgcaccggctagctgatttgcgagtggagtcgatggagagctgttcccggaaggtggaagaggacagggctagaagtgcagcagcttgcatccagttggtggtagctgatggacataacccatggagtgatttattctttatggcactggatgtatttgagcgtgcttattggcgtcaatggttcattgattactgccctacacccgagtcacggtcccattacatagtacagacatggcaaaagcaatttggcggaaaaggagctggtggccaaggaggtggacagcctggatacgaaggaggaactgggcagcagcgttatggtgtaggagcacccccgccaactggccagcagggttatggtggaggagtacccccgccaacttgttcaggaggtcatacagggtttggaggttggtaggggggtggccctggtggaggtgggggtcctggtagcgtagatggtaatgggttctattgagttgctcttgcttggtcagttgcctggagctcactgagaggaggagattcatatgagaggcataaaaaataatgctcaccatattgtttgcagtaggattttagcatctgcttaactgtttttttcttgtatgatttgtaccctcttgttgtatgattttagcatcttgttgtatgatttttagcatctgctttactcatttctaatgcttgtagtctgaactagtaattgtggtatgtcactgtgaaattttttatgcagttaatttttttattgaacaccatgcgtgcatttttttacaaataatgttgtaatggttaatgtaagctatatatttttcttgtttcgaaggaatcacacaatgagcgacggttcatcgtggagttcggatggtactgaagggcaatacacgagcgatgaggatgacgctattattgcaatgatgcaagagattttagctgctcctccaagagctcctcgtcgtgtcccaacccaatttggaataacttggatgctagagacaatggcgaatcctgcacagtgccgtgcgattttccgtttaacggaatatcagatatacactctacatggaattttggaaaatgccccttacaacctgcatgggagtaatgatgtaagttctttggaggcactaggaatcttcttgttcacaatggcaggaaataattctgcaagggagtcgaacaatcattgggtccggtcgaactcgacggtgtctatctatttttgaagggttcttagccaaatagttatgttagggtcgaaaatactcaagccaattgatccgaattttacggacatccctcgtcgcctactacaagatagtcgttttggaccattccagtttgctgtaggtgctgttgacggcacacacattccggtcactgttggtgtggatagtgccatagaacacatgaatcgccatgacgagacaacaaaaaatgtcctaacaattgttggattcgatggtagagttatatttgccgatgccggatggccaggatcagtgcatgacaatcgagtcctaaacgaagctattgactcttatccagaggagtttccaagactaccttttcgtaagtactacatttgtacaccatatagcacttcattaattgtgcactgatagttttcatgtataatttccttattattttgtaggaaaatatcttcttgttgactccggatatccgagtaggatgggcttcctggcaccgtacccacgtgtacggtaccacaaggatcaattcaaggggccacgcgctccaccgccagaaggaagggaagagaagttcaactacatacatgccaagctgcgtaatataattgagaggcaatttggaattgtgaaaaaacagtggaaaatcttaaaaggcataccgtacaacccatataagaatgtccagagcgacataatattggcagcgttttgtttgcacaacttccgaatcgacagcaagcaaaatgactaccaggccaataaccctctgtataatggtaatcctatagcaccaatggcaccccccttctccaatatgtattacgccggcaatagcacacaagcgatgaacgcatactgtgatgccattgccaattcggtggagaacctgtag</dnaseqindica> 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| External Link(s) |
