Os02g0645600

From RiceWiki
Revision as of 02:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0645600| Description = Similar to AG-motif binding protein-3| Version = NM_001054107.1 GI:115447584 GeneID:4330143| Length = 1761 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0645600

Description

Similar to AG-motif binding protein-3

Version

NM_001054107.1 GI:115447584 GeneID:4330143

Length

1761 bp

Definition

Oryza sativa Japonica Group Os02g0645600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26883848..26885608

Sequence Coding Region

26883946..26883981,26884102..26884434,26884552..26885346

Expression

GEO Profiles:Os02g0645600

Genome Context

<gbrowseImage1> name=NC_008395:26883848..26885608 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26883848..26885608 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgttcgcgcaccaccaccatggctcgctggtggagaaggacgggaggatgtccgcgctgaggagtagccttaggccgtacgaggcggccgaggagatggccgcggcggcggccgccggcgggccggcggcggcgtggggggcggtggagaggggggcagggatgatgggggacgggttctcggtggaggacttgctggaccttgaggagctctgtgaggtggacagggacggcggcgagcaaggcgaggcggcggcggcggcggcggccgccgtggagaaggagaggtctagtgactcccatggctcatcggtggtgtcgtatgagcccatgccgctgctgccgccggtgatggacctgccggcgcatgacgtggaggagcttgagtgggtgtcccgtatcatggacgactcgctcgccgagctcccgctgccgcagctccccgcggcggcggcggcgttggcggcgtgcggcaagccgcagcaccggcggccgcacgaaggcgcggcgtcggcgttgttggaccctatgcgcaccccgaccatttgcgcgctgtcgacggaggcgctggtgccggtgaagtcgcggcggagcaagcggtcgcgtgcctccgtgtggtcgctctccggcgcgcccctgtccgactcgacgtcgtcgtcgtccaccgcgacaacctcgtcctgctcgtcgtcggcctccttctcgccgttcctccagtacgtggacttccccgcgctagtcgcctccgacctgctcgacgagcagccgcgctccaagaagtccaagcacggcaagaacggcaagcagaagcccaagaagcgcgggcgcaagccgaagcaccagcagccgccgcacctcgccgccgccgccggcggcggcgccgccctccccgccacgggcgaccgccgctgcagccactgcggcgtccagaagacgccccagtggcgcgccggccccgagggcgccaagacgctctgcaacgcctgcggcgtccgctacaagtcgggccgcctcctcccggagtaccggccggcctgcagcccgacgttcgtcagcagcctgcactccaactcccaccgcaaggtgctcgagatgcgccgcaagaaggagacccccgtcatcgtggcggccgccgcgccggccgtcgcctctttctag</cdnaseq>

Protein Sequence

<aaseq>MSSFAHHHHGSLVEKDGRMSALRSSLRPYEAAEEMAAAAAAGGP AAAWGAVERGAGMMGDGFSVEDLLDLEELCEVDRDGGEQGEAAAAAAAAVEKERSSDS HGSSVVSYEPMPLLPPVMDLPAHDVEELEWVSRIMDDSLAELPLPQLPAAAAALAACG KPQHRRPHEGAASALLDPMRTPTICALSTEALVPVKSRRSKRSRASVWSLSGAPLSDS TSSSSTATTSSCSSSASFSPFLQYVDFPALVASDLLDEQPRSKKSKHGKNGKQKPKKR GRKPKHQQPPHLAAAAGGGAALPATGDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVR YKSGRLLPEYRPACSPTFVSSLHSNSHRKVLEMRRKKETPVIVAAAAPAVASF</aaseq>

Gene Sequence

<dnaseqindica>99..134#255..587#705..1499#cctctgccttttcccctgcttcccacttcctccacgcctcctcctcctcctcgccttcgctttcctcccacgccgtcgtcgccaccgccgccgccgccatgtcgtcgttcgcgcaccaccaccatggctcgctggtgaggctctctcttgcgtggttgagccgttcgcgacggttttaattagggtggttcttgaaactgacgagagtttcgtgtgtttctttcttttgctctgctttctttgtgcggtttcaggtggagaaggacgggaggatgtccgcgctgaggagtagccttaggccgtacgaggcggccgaggagatggccgcggcggcggccgccggcgggccggcggcggcgtggggggcggtggagaggggggcagggatgatgggggacgggttctcggtggaggacttgctggaccttgaggagctctgtgaggtggacagggacggcggcgagcaaggcgaggcggcggcggcggcggcggccgccgtggagaaggagaggtctagtgactcccatggctcatcggtggtgtcgtatgagcccatgccgctgctgccgccggtgatggacctgccggtaagaacatacatgacgacgttacgtttggctcctcgtttcgcgccaagcgcgtcgacttttgcagtctccacccatgtcgtcgtttgctcatgaggtgtttgtttttgtgtacaggcgcatgacgtggaggagcttgagtgggtgtcccgtatcatggacgactcgctcgccgagctcccgctgccgcagctccccgcggcggcggcggcgttggcggcgtgcggcaagccgcagcaccggcggccgcacgaaggcgcggcgtcggcgttgttggaccctatgcgcaccccgaccatttgcgcgctgtcgacggaggcgctggtgccggtgaagtcgcggcggagcaagcggtcgcgtgcctccgtgtggtcgctctccggcgcgcccctgtccgactcgacgtcgtcgtcgtccaccgcgacaacctcgtcctgctcgtcgtcggcctccttctcgccgttcctccagtacgtggacttccccgcgctagtcgcctccgacctgctcgacgagcagccgcgctccaagaagtccaagcacggcaagaacggcaagcagaagcccaagaagcgcgggcgcaagccgaagcaccagcagccgccgcacctcgccgccgccgccggcggcggcgccgccctccccgccacgggcgaccgccgctgcagccactgcggcgtccagaagacgccccagtggcgcgccggccccgagggcgccaagacgctctgcaacgcctgcggcgtccgctacaagtcgggccgcctcctcccggagtaccggccggcctgcagcccgacgttcgtcagcagcctgcactccaactcccaccgcaaggtgctcgagatgcgccgcaagaaggagacccccgtcatcgtggcggccgccgcgccggccgtcgcctctttctagcctagcctagctagcaccgccgcggtggctgtacattttcctttttcctggccgtatcattagtctgctgtaccgtacctgaactttttcctcccttctctctattttagtcccgtcgtacggctagaattcagtagtaggaaaattagaggtctcatttagagattgtgttaggtttagtgatcaacatttgcatgttttagcattagattgttatagtgtactctagtagaaagcactcgagctcttcacaagaaaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0645600, RefSeq:Os02g0645600