Os02g0646500

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Revision as of 02:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0646500| Description = Aldehyde dehydrogenase NAD(P)-dependent family protein| Version = NM_001054110.1 GI:115447590 GeneID:4330146| Length...")
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Gene Name

Os02g0646500

Description

Aldehyde dehydrogenase NAD(P)-dependent family protein

Version

NM_001054110.1 GI:115447590 GeneID:4330146

Length

7087 bp

Definition

Oryza sativa Japonica Group Os02g0646500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26921197..26928283

Sequence Coding Region

26921423..26921674,26923783..26923932,26924025..26924115,26924203..26924363,26924609..26924713
,26924823..26924947,26925048..26925254,26927056..26927151,26927736..26927805
,26927921..26928127

Expression

GEO Profiles:Os02g0646500

Genome Context

<gbrowseImage1> name=NC_008395:26921197..26928283 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26921197..26928283 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagaagccgcagcacggcagcttgggcggcttggtggccggcgtgagggaggagtacgagagcgggaggaccaaggagctggagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgccatcttcgacgcgctccacgacgacctcggcaagcaccgcgtcgagtccttccgagacgaggttggggttcttgccaagtccgtcaggaacacgctgcaaaacctcaagaaatgggcttcgcccgagaaggttgatgtgccgcttatttcatttccatgcaacgctcgggtcgtgccggaaccaatcggggttgtgctcattttctcatgctggaatctcccaataggcttagctctagagccactctccggggccatagcggccggcaacgccgttgttctgaagccctccgagtttgcaccgtcaaccgccgcgttcctcgccgccaacataccgaagtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagctcatggagcacagatgggacaaggtccttttcaccgggaatgctcgtgtagggcgcatcattatgacgaaagcagcgaaacacctgacgccggtcgcgcttgagcttggctcgaaatgcccgtgcatcgttgactgccttgacagtaagagggagtgtcaggtcgccgtgaatcggataatcggagcgaaatggtctacttgtgcaggacaagcttgcgttgccatcgattacatacttgtcgaggaacagtttgcaccattcctgattgaactgcttaaatctacactcaagaggttctttaccgaaccagagtacatggcgcgcatcctgaacgagaagcatttccataggttgacaaaccttctagaggatgatcaagtgaaatcctccattgtgcacggcggcaacgctgaccccaagacactgtggatcgagcccaccatcgtgctgaatccaccgttcgactccgacatcatgatggaggagatattcgggccactgctcccaatcataacggtaaagaaaacagaggattgcatcgcgttcttgaaatcgaagcccaaaccgcttgccatctacgccttcaccaacaacgagaagttgaaacagcggatcgtcgcagaaacgtcctccgggagcgtcttgttcaacgacgcgattgtgcagtacgggctggacagcgtcccgttcggcgggatcggggagagcgggttcgggcagtaccacggcaagtacacgttcgagctgttcagccacaggaaggcggtggtcaggaggagcctcctggtcgagttcatgttcagatacccgccttgggacgagtacaagatggggatgttgcgccgcgtcttcaggttcgactacgtctcgctcgtgcttgcgctgctcgccttttggctgctcggcataaggcgatga</cdnaseq>

Protein Sequence

<aaseq>MEEKPQHGSLGGLVAGVREEYESGRTKELEWRKAQLGGLIRMIT EEEDAIFDALHDDLGKHRVESFRDEVGVLAKSVRNTLQNLKKWASPEKVDVPLISFPC NARVVPEPIGVVLIFSCWNLPIGLALEPLSGAIAAGNAVVLKPSEFAPSTAAFLAANI PKYLDANAVKVVQGGAEVGEELMEHRWDKVLFTGNARVGRIIMTKAAKHLTPVALELG SKCPCIVDCLDSKRECQVAVNRIIGAKWSTCAGQACVAIDYILVEEQFAPFLIELLKS TLKRFFTEPEYMARILNEKHFHRLTNLLEDDQVKSSIVHGGNADPKTLWIEPTIVLNP PFDSDIMMEEIFGPLLPIITVKKTEDCIAFLKSKPKPLAIYAFTNNEKLKQRIVAETS SGSVLFNDAIVQYGLDSVPFGGIGESGFGQYHGKYTFELFSHRKAVVRRSLLVEFMFR YPPWDEYKMGMLRRVFRFDYVSLVLALLAFWLLGIRR</aaseq>

Gene Sequence

<dnaseqindica>6610..6861#4352..4501#4169..4259#3921..4081#3571..3675#3337..3461#3030..3236#1133..1228#479..548#157..363#atatctctagtcgaatatgggggtcttgtggcaccgggtcctcctattcttcacgatcactctgctataaattaagaagccaccagataatcaatcgcattttaacgtatcgcatccccggccacaagctagctgcttgcctgcggcgatccacacatggaggagaagccgcagcacggcagcttgggcggcttggtggccggcgtgagggaggagtacgagagcgggaggaccaaggagctggagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgccatcttcgacgcgctccacgacgacctcggcaagcaccgcgtcgagtccttccgagacgaggtgacctcgatcgctcgccgtggcaactgacaaacgcttgttaaattagctgatgatctctgttcattcggtttatgctctggtttatgtatattaattaattgctcgtccacaggttggggttcttgccaagtccgtcaggaacacgctgcaaaacctcaagaaatgggcttcgcccgagaaggcaagaactgcacctacttaaatcctgcaccgtgtgttagggccttttcgcttatgctcatgcttatcagtcaaaatttgaatttttaagcttaaatttggagctgattttgaggtttttcatcgaagcttatttttcagcctttgttttcatatcgctaagaacacgtatataaaaattttatttacaaattaccttttattttcaaatatgccgtttcgcttattccgcgaataagcaaaatgatggctccgttaaaatatgcggcagtcaaaattttaaaactttaaacagaaaataagtaaaaatagtaatccctcaatctacttttgatagttatatagagggagtaattagtatcgaccattactagctagatttataatgctgtaatttaatgttctttcatgaatatgtactttgaaaaatgatagtcaagcaagcatattccttatggcaagaaaacggagaagagatgtatagtctccagcaggtgcaatataagcttctgcaaaattaaggccggcacattaattcatttgttacgtactctgactggatagttgggggttttgtgggtgcaggttgatgtgccgcttatttcatttccatgcaacgctcgggtcgtgccggaaccaatcggggttgtgctcattttctcatgctggaatctcccaataggtgaaaccattttgctccattcatcatggtcggcttggctgtttttcataaaggaagtctattagttgcagagcaaatcattttttcctgatccatataccagactctttttcttgacaatgaaaatataacttcaattgatctccacaccaactgaagaggcacacaaacgcacagttaatatttgaatcatatcgaatcaagtaatgcatctatgacttcaccaccgcaccaaattaattttaaacaggattttccggtgaagagtgatttaatatggtgtgacaacttctacatatcggtatctaattaacggtgagacagcgatagagatgcgacgtactccctccgcttcataatataagttgatttattttttttcttagtcaaactttttaagtacattcaagcagatttatagaaaagtttagaaatatttgtaacacaaaattagttttattaaaataacattgaacatattttgattatatgtttttatgttgaaaatgttactatatttttctataaatttaatcacacttaacaaaatttgacttgagaaaatcaaaacgtcttataatataaaacgaacagagtatttttgtcctctttgtctaaaagatctttccttttaaccatataagtacataacccaaaaacatcttaagaagaatagcatggatcgcaatttgttacagttttgaagttcacaatggaaacttaactttaaaaaggttactcgatcgaggaccgtgatcttcttttctcgattacgaaaataaaacggcccacatgcttaataattgccttcagagacgagacctgtgtgttattagatcgtaatcgtgagttagtctcatagctgcccgatggtaacatatatattaattttcgatcgtcttatgcaatgaagccttgcaagttaatgcagcaagttccatcggtctcacggtggttggttgctgaattgatcacgtccgtcactgcagagatcatgaacatactcattatattgccttaaccttttgagcgccaatacatccaaaaatgcattcctacgtacagttgtcagcatcagagtactgtccatcttcctctatgaacttaagcttttaggttaacctaacttgtgcgtgcaactcaatagaaagaaatgcaccaatttataacaccatgttcatggactggtcattcaaatgaaaagatatatatgccatatttaaggaattctagcggtcgtagtttctctcagtatgtctaactttagtaaacagtgtagattcttataatctatagttatagtatcaagtcaaaagttggctaccaaccaactgtttcttgagaatcttagggcctgtttgggggtgcttctggctgccgcagcttctcccagaatctccagcacccccaaacagtacagattgtcacccagattctcagaatctgtagttgtggattccagaaaataaactagtacccagaaactagaaaactcagcttctctagattcttagaagctggctaccaaccagcagatctcggaatcttaagctcccaaataaaaggagaaaattgcaatattaggactgcaaacattagggcttcgctgatttgacactccgagtagatgacaaatgggcctatatgttacaaataagacgatagggtgaacttcagattatctcggcaccatgtccatgaccataattcacataaccaaacactcttgtcaattgcgtggtagtttgcatggtctgtggctcagtgctcacctttttcatggcatgccgtacgtccacaggcttagctctagagccactctccggggccatagcggccggcaacgccgttgttctgaagccctccgagtttgcaccgtcaaccgccgcgttcctcgccgccaacataccgaagtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagctcatggagcacagatgggacaaggtccttttcaccggtaaatgcatgacgtacactgtgccaaactcaacttggttctgaaacttcaattcgtcgttattgactgtatttattatgatggtcattttgtttttcagggaatgctcgtgtagggcgcatcattatgacgaaagcagcgaaacacctgacgccggtcgcgcttgagcttggctcgaaatgcccgtgcatcgttgactgccttgacagtaagagggagtgtcaggtatagcgttcgatctgttcttcaccagttttcagttctgagatacaatgcctggttggaaggtggaagggcaagagtgagcttatctgatgatgccttggtcgcacaggtcgccgtgaatcggataatcggagcgaaatggtctacttgtgcaggacaagcttgcgttgccatcgattacatacttgtcgaggaacagtttgcaccattcctggtctggtttcactctgaaattttcgtttgattctagtgccatttcgccagatgagttttgtaccacatttctaactagagaaattttatagaccttgagaatttggtagctcaaactatttagtacttacaagtactaaattttacattagaaaatgtggtaccttcttgtacgttatcaaggatatatagtaaattatccttctaacaaatgtcgtttctggtgtatgtgtcatatctctgaagattgaactgcttaaatctacactcaagaggttctttaccgaaccagagtacatggcgcgcatcctgaacgagaagcatttccataggttgacaaaccttctagaggatgatcaagtgaaatcctccattgtgcacggcggcaacgctgaccccaagacactgtaaattattaactccaaccttttgcattcctagccaatcgtatacacggaatttcggtgtatcatgccgtgattctaactgtgcaggtggatcgagcccaccatcgtgctgaatccaccgttcgactccgacatcatgatggaggagatattcgggccactgctcccaatcataacggtacgagtcgacaaagatagcggcaattcttgattgaaccaagcacaacccacgcatctggcggaaacaacaaacgccgctcttgtttgcaggtaaagaaaacagaggattgcatcgcgttcttgaaatcgaagcccaaaccgcttgccatctacgccttcaccaacaacgagaagttgaaacagcggatcgtcgcagaaacgtcctccgggagcgtcttgttcaacgacgcgattgtgcaggtaaaagaacacaacgagacgagatgcgcactcatgctttgttagagataaaatctttcacagtgtcctgcagtaaaatctaaagaggtaatttcataaaactacatatattttagccaaatctattaagttattaaaataataaaaaagcctccatggtaagtctcacaacctataaattcaaaatagagtccatatagaaatacaatttaaaaaatagctgaaattcagaattaaaataaggaatagtgaagagtagactagagtccataccggtatataatttagaattaacagaaattcaaaattaaaaaataagaaaatttaaagtagatattagagtccatatagaaataaaattataaattttaaaaaataataaatattggaagaagcgtctatatgaggttcatatagaaatacaatttagaaataactaaaattaaaaataaaaataaggaatattaaaagataagtttagattccatatgaaaatacaatttataaataataaggaagattggaagaagaatctagagtccatataggaatttagaattaattaaaaattggaataaaaaataataagtttaaaagtagaatttagagtccatatataaatacaatttacaaataactaaaattccaaattaagaaaatgaatattagaagaagtgtctagagtccatataggaatacaatttacaaataactgaaatttgaaattaaaaaaataaagaataatgaaagatgagtttacagttcatataaaaatacaattagaaatattaaaaattaaaaataaggaatattggaagaggagtttagtccatataggagtacaatttaaaaatgactagaatttggaatttaaaatatgaaatcttaactacttaaaaaattatatctttctaatcatcacatgcgatttttggtccatcgtccgagtttgcacacgatcggacaaagcaatggcgacgtctgcatgcccggctatgtctgttcctcttctttttcctcggtttagggcttcaggccaagcaggcagaggaggagaaggcgtacgacgtcggcgcgtccagtggcttaacggtggcgcctcaacgcaatcccgaacacaacacaatggaggaatgcggcaaccggcatggggagtgagggaagagttgggaatgccgatgacaagaacttagtccggcaggagagagaaaactctgaggtggcttgatgtgaggtgggagaggaggaaatggggaaaatggattcgccggagtgggaaaatgctagtggtgagatggtacggcgagatacgctataggggaggcggagatcactccggtagggcagtggcggctgttaacgaccaaatttgttttttgcatcaacagcggcgtgcgcacgacgcgccctctggaaggaaggaggcggttggctcagctgggccacggcctggctgggccgtgttagggagaaaagaccggaaggacccaaacaggaaggtgatggaattagcccaggagggagatgaccggttggaaggatttcggtccaaaagaaatggaagagttttctgaatttttgaaggggattattttaatagaatctaaaaagagatgtagttaaaacgaaggagatgtaattcaaaagaatttgtttggagactatttgggatttggagataaattttaacatatagttcatggaatctatgcatgtgggaatggaagtttaaagggacttttattttggggtattgggttaaaggaggggtatttgaataaaatacatgtagttcatagactctatgcatgtgggagttttggtttatttttggaaatggaagtttaaagtgacttttattttgggtattggttcaaaggaggagtattggaataaaggaatagatatttgaaattggagaagagtttttgataggaatactttaagtacataatttcatatgggtgctatccgtctatccgtgcaattgcagagggccatccagctaatttaaagtatatatggttttgtgaaatttactcaaaacttaaaaaaaaaatgtgatgccctttttttttctgatatgtcgctgcaatctgtgcatgcagtacgggctggacagcgtcccgttcggcgggatcggggagagcgggttcgggcagtaccacggcaagtacacgttcgagctgttcagccacaggaaggcggtggtcaggaggagcctcctggtcgagttcatgttcagatacccgccttgggacgagtacaagatggggatgttgcgccgcgtcttcaggttcgactacgtctcgctcgtgcttgcgctgctcgccttttggctgctcggcataaggcgatgaaggatcgatcaatcgtctgcagtgttggttcataaaatgtgtgatcgtcgtgccatgcggccaatgcacatgccggggacactattttatgtgatatttatgtatttatttccaagaaacgtgcttgcagttactaaataaactcaaaaaatataactacctgttagtgcattgcaatattgtatcaaacagtttgatcatccaatacattccgattcatgtgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0646500, RefSeq:Os02g0646500