Os02g0647900

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Revision as of 02:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0647900| Description = Similar to Fatty aldehyde dehydrogenase 1| Version = NM_001054113.1 GI:115447596 GeneID:4330149| Length = 5744 bp| ...")
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Gene Name

Os02g0647900

Description

Similar to Fatty aldehyde dehydrogenase 1

Version

NM_001054113.1 GI:115447596 GeneID:4330149

Length

5744 bp

Definition

Oryza sativa Japonica Group Os02g0647900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26966662..26972405

Sequence Coding Region

26966803..26967036,26967156..26967224,26967331..26967427,26970340..26970546,26970679..26970803
,26970900..26971004,26971108..26971268,26971345..26971435,26971529..26971678
,26971764..26972000

Expression

GEO Profiles:Os02g0647900

Genome Context

<gbrowseImage1> name=NC_008395:26966662..26972405 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26966662..26972405 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccggcaatggtagccgccatgggagagaagccgaagcccgcagtcgtgttgggcggcatggtgagcgggctgagggaggtgtacgagagcgggaggaccaaggacctggagtggaggcagtcgcagctcaaggcgctcatcaggctcctcaccgacaaggaggaggagatcttcgccgtcctccacgacgacctcggcaagcaccgcggcgagtcgttccgagacgagcttgggattcttgtcaagtcgatcaagtacacgctgcaaaacctcaagaaatgggcggcttcggagagggcggaatcgccgttggttgcattccctgcgaccgcgatggtggtgccggagccgctcggtgtcgtgctcgttttctcctgctggaatctgccactaggcttagcgttggagccactctccggcgccatagcggccggcaacgccgttgttctgaagccctccgagctcgcgccgtccaccgccgcgttcctcgccgccaacatcccgaggtatctggacagcagggcagtgaaggtcgtcctgggaggccccaatgttggagaggaactcatggagcacagatgggacaaggttcttttcaccgggagtgccagaataggacgcattatcatggctaaagcagtcaaacacttgaccccggttgcacttgaactgggttcgaaatgcccatgcatcgttgattggctggacagtaagagggataggcagattgcggtgaaccgcataatcggagcgaaatggtcgacttgtgctggtcaggcttgcatcgccatcgatcacgtaatcgtcgaggagagatttgcaccgattctgattgagctactgaaatcaactcttaagaggttcatggccaaaccgggtggcatggcccgtatcctgaacgcaaaacattttgagaggttgagtggctatctggaggataatagggtggcagcttctgtagtgcacggtggttacatggaccccaagaaactgaatattgagccaaccttactgctaaatcctcctgctgattctgatgtcatgaccgaggaggtatttggcccgattctcccaatcatcacggtaaagaagatcgaggattgcatcgcgtatttaaagtccaagccgaaaccgattgcgatgtacgccttcaccaacaacgagaggctgaaacgccggatcgtagaggaaacgtcgtccgggagtgtcacattcaacgacgcagttgtgcagtacgctcttgaaagcgtccctttcggcggagttggccatagcggattcggacagtaccacggcaagtactcattcgagctgttcagccacaagaaggcggtgttcaagagaagctttctgatcgagttcatgttcagatacccaccatgggatgagagaaagatcgggacgctgaggcacgtcttcagctataactacttcttgctgttcttcaacctgctcggctttaggagatga</cdnaseq>

Protein Sequence

<aaseq>MAPAMVAAMGEKPKPAVVLGGMVSGLREVYESGRTKDLEWRQSQ LKALIRLLTDKEEEIFAVLHDDLGKHRGESFRDELGILVKSIKYTLQNLKKWAASERA ESPLVAFPATAMVVPEPLGVVLVFSCWNLPLGLALEPLSGAIAAGNAVVLKPSELAPS TAAFLAANIPRYLDSRAVKVVLGGPNVGEELMEHRWDKVLFTGSARIGRIIMAKAVKH LTPVALELGSKCPCIVDWLDSKRDRQIAVNRIIGAKWSTCAGQACIAIDHVIVEERFA PILIELLKSTLKRFMAKPGGMARILNAKHFERLSGYLEDNRVAASVVHGGYMDPKKLN IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNNERL KRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSGFGQYHGKYSFELFSHKKAVFKR SFLIEFMFRYPPWDERKIGTLRHVFSYNYFLLFFNLLGFRR</aaseq>

Gene Sequence

<dnaseqindica>142..375#495..563#670..766#3679..3885#4018..4142#4239..4343#4447..4607#4684..4774#4868..5017#5103..5339#aggccaaatcgcctgcaataattctctcgccgtgtaacaacaacacacgcgccagccgagagaaaccaaacactagacccccaccacgagttcacgacgtgcacgagcgagcgagctagaaaagcaagcgagagcgagcgcatggccccggcaatggtagccgccatgggagagaagccgaagcccgcagtcgtgttgggcggcatggtgagcgggctgagggaggtgtacgagagcgggaggaccaaggacctggagtggaggcagtcgcagctcaaggcgctcatcaggctcctcaccgacaaggaggaggagatcttcgccgtcctccacgacgacctcggcaagcaccgcggcgagtcgttccgagacgaggtgacgatcgagcgagtcaccgccgacacgtttactaatccgtcccatgcatgcatgctttggtctctctgcatttggtttataagctggtatatggtttttgtatgtaccgtcttcagcttgggattcttgtcaagtcgatcaagtacacgctgcaaaacctcaagaaatgggcggcttcggagagggtgagcagtaagctcgtgcagtgttacatctgcatgcatttcagacaggtactagctcttgttaccatggctgtggcctcctacgctgtgcttttgtttgctgtaggcggaatcgccgttggttgcattccctgcgaccgcgatggtggtgccggagccgctcggtgtcgtgctcgttttctcctgctggaatctgccactaggtgaagtgaaataaaccctatactctgttctgttctagaagaagcagaaatctctcggtagcaagttctctagagttatattttgccataatggccaaaaggtgtctgttaaatcacaaataaactcccttgcccacttgcccgcccgaaaatcagggactggcacgttgttatcatgttggatatgcatcatctcacggtattaattgcctcgtggattaagttattattacactccactcaacctaccagaacccattacgaagcagtgaagacgactctgtatcgacaggaacgtgcgtggttgtaacgacaaatcacgttatttcgatacaggttaatcacgggtcacaatactatgtagattgatttgatatatatctaaccgactcatacgggcaattgagacaatttggtatcacacggggttgttatcagttgcactcatcacccttgggtgttcacaagatgatgtattgatgtggtccagaaatctgtaacactgttcatcgcagcactgtaccagaagaattactccctccgtcccacaacaagcaaaccgtggattcccgtgttaacgtttaattgtccgtcttatatgattttttttataattagtattttcattgttgttagatgataaaacatgattaatattttatgcatgacttatctttttaattttttataacttttttaaataagacgaacagtcaaacattggaaacggaaatcaaggtttgtctttttttttggacggaaggagtatgtagatagagctgtgacggttactgtaggtcaaatgtttagacgttgatgcccctgatctgacagctgggaaatggaatgcactccatggttaccctaaatgcagatatattgtagaaaaacaaaatttatactatttttctcatcctaaaatataacaacctatgataatattagacttatcctaaaccatgaatttggacataccgtatgataaattcgttgtgttaggataagtttaatcccattctaaattgttactatattttaaaacggagggagtagaaagttttataaatgcttggctaatgaagttagttgaattgaattgctcgtactttctcatgaacttaagtttttaagcgagttggctaatagtccatgatgcacgttaatatggtattagagtcaggcatggaattcatatgatagctgatgtgattaaatgaaaaacttgaagctcttccattccatgtattataagagcaagtttaatagtacaatcaactactagctccaaatcatttgtaatcaatttaatagctaattcatacaataagaacatataaacgtatactacactattagcacatagtcccacctgccatacatacattttgtctaggagcccgtgctgcagctagcaacaaatttgtagcccgctgctcatctctctttttttatttccttgatatgtgtttatagctggcatatagcctggtattgtacctgctctaaggtacaacatccacatgattcatgtggagttttgaagtgaaccgttggctctctctcattagctcaagttttttggttgacttggttgacgcatgtactccatccgtcccaaaatataagcatttttagcatagtgataagtcaaacattttcaactttgactattaatagcaaaaaaaaatataaaagatcaatcatgtaaatttgatgttacctagatttatcattaaacaaactatcataatatgtaactatttttatttaaaacattttacttttatagatattgttagtcaaagtagtatcttagagaccgtatcaaagttcaaaaatgcttatattttaggacggaaggagtagcttcataaacacttttgaagcttcatatactaaatgattcaaaatgtagatgggtctcaactactttttttttgcgcaaatcaaacaatacctcttgaattctaataaaatttttaaagaaagaaagtttctgttgtaaatgaatgtagtactctgtatagaaaatatgtaagaattcaacatttcgaattggacctcaatttcaaatttaggattacaaataaaaactatgcatttcaactggggtgttactgtgtcagggtctttactccttaggatttgtttgggtgggcctccgtcctagctcatccacatggatgggtggattggaccaggactaaacccatccaatcgaggcctcgtggagacaaattaacggtttattgtctatttcatatttccctcgtccagagaaagtagtacctcgcctacttaaatttacaagagaaaaaaaagggtggaaataatgcaatatggttcagattctttaaagctttgtttttttaaaaaaatactatatgatccaaatatagattcaatagaacaatacacattattgcagttagttgggtagttaaaaaaattaatgtgatttctcctgcttctcgaggagttgaacataaatatgataacccccgcaaataaaagtatgtactccctccatttcatattataagtcgtttggttttttctctagtcaaacttttttaagtttgattaaatttgtgaaaaaatataatagtattttttaactcaagataaacatattatcaaaatatatgtaatgttagatttaatgaaactaattatatattttagatgttactaatttttttataaacttagttaaacttaataaaatttaacttaaaaaaaagtcaaacgacttataatatgaaaattgtaaacggatgtagtaacgcttaattgtactgtatttaatttaaggatattccgtcaccagtgtcaccaaactaaattaatggaatcatgcccactgcactaaatctggccattctccgtgtgtccgtacgctctgtctgcaggcttagcgttggagccactctccggcgccatagcggccggcaacgccgttgttctgaagccctccgagctcgcgccgtccaccgccgcgttcctcgccgccaacatcccgaggtatctggacagcagggcagtgaaggtcgtcctgggaggccccaatgttggagaggaactcatggagcacagatgggacaaggttcttttcaccggtagtacaaattccattgcctgcaaaatcacctctaatttgtttctcttctcaccatttttcagacggaaaagttatgtaaatctagttgttctcaatgcatatctaatggtcgtttcttgggtttgatcagggagtgccagaataggacgcattatcatggctaaagcagtcaaacacttgaccccggttgcacttgaactgggttcgaaatgcccatgcatcgttgattggctggacagtaagagggataggcaggtagaatcctcaatttctcatcaatattcagtttcgctgcagtatacagtcacactgtaggacaggttgacagtgtcccgtacaccaatgacacagattgcggtgaaccgcataatcggagcgaaatggtcgacttgtgctggtcaggcttgcatcgccatcgatcacgtaatcgtcgaggagagatttgcaccgattctggtctggttcatcattctgaatcctacgcagtaaaacttcttgccatacaaacaccgtgacttacaatgtctcttcttgcacattttttttctgttatctgtagattgagctactgaaatcaactcttaagaggttcatggccaaaccgggtggcatggcccgtatcctgaacgcaaaacattttgagaggttgagtggctatctggaggataatagggtggcagcttctgtagtgcacggtggttacatggaccccaagaaactgtaagttctgaaaacctgttggccaagcgtctgcacacaattggtcccgcacgatttcattcccaattgcttgcaggaatattgagccaaccttactgctaaatcctcctgctgattctgatgtcatgaccgaggaggtatttggcccgattctcccaatcatcacggtacgcactgacaacgattgcatagtttctgggtggatgatttcacatacatctgcaacctacgactgaaccaatttgatcatccgtttgcaggtaaagaagatcgaggattgcatcgcgtatttaaagtccaagccgaaaccgattgcgatgtacgccttcaccaacaacgagaggctgaaacgccggatcgtagaggaaacgtcgtccgggagtgtcacattcaacgacgcagttgtgcaggtatgcacggccacacaccccgtttcagagctaaaactgtaccgcagtaaaattctcatcgttttttgccactgtcatgttgtagtacgctcttgaaagcgtccctttcggcggagttggccatagcggattcggacagtaccacggcaagtactcattcgagctgttcagccacaagaaggcggtgttcaagagaagctttctgatcgagttcatgttcagatacccaccatgggatgagagaaagatcgggacgctgaggcacgtcttcagctataactacttcttgctgttcttcaacctgctcggctttaggagatgaagaagccagccgaagaaagatttcggctgtgaagaagtaagcagagaaagaagctactactatatagtagtatatagtagtagtaatatactacagctaaacacgtggattatatacggttctaccttgtgtgatgtgataatgtatcactatacttcagttgcatattgtattgtcacgttctatgctcttatttattgtactctttggaaagaaagggagggattgttttattttttttaaaaaaatgactagtggaaatagggtgctccgacatgttatacataaaagaagatatgtaaagagtttaagggtgctttggatcctcagcaaggccaatcctagcattgtctagcaggttaagtgtttaatacaagtaaaaaaatagcttttgaagatgttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0647900, RefSeq:Os02g0647900