Os10g0430200

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Revision as of 08:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0430200| Description = Similar to Sinapyl alcohol dehydrogenase| Version = NM_001071194.1 GI:115482131 GeneID:4348690| Length = 5402 bp| D...")
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Gene Name

Os10g0430200

Description

Similar to Sinapyl alcohol dehydrogenase

Version

NM_001071194.1 GI:115482131 GeneID:4348690

Length

5402 bp

Definition

Oryza sativa Japonica Group Os10g0430200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15761109..15766510

Sequence Coding Region

15761372..15761583,15761668..15762335,15762610..15762723,15766204..15766310

Expression

GEO Profiles:Os10g0430200

Genome Context

<gbrowseImage1> name=NC_008403:15761109..15766510 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15761109..15766510 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcccacggcggcgtcggcggcggcgggggaggagcagcaggcggtggggctggcggcgcgcgactcctccggccacctctcccctttcgccatctcccggaggagcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgacctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggcacgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcgacagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaacaatggcttcgagaaccactgcccggagggcgtcttcacctacaactccgtcgacaaggacggcaccgtcacctacggcggttactcgagcatggtggtggtgcacgagcgcttcgtggtcatgttcccggaggcgatgccgctcgacgtcggcgccccgctgctgtgcgccggcatcaccgtgtacacccccatgaagtaccacggcctgaacgcgccggggaagcacgtcggcgtgctcggcctgggcgggctcggccacgtcgcggtgaagttcgccagggcgttcgggttgaaggtgacggtgatcagctcgtcgccggggaagaagcgggaggcgctggagcggctcggcgccgacgcgttcgtcgtgagcagcagcgccgaggagatggaggccgcgaggtccaccatggacggcgtcatcaacacggtctccgccaacacccccatggcgccgtacctggcgttgctgaagcccaacgggaagatgatcctcgtcggcctcccggagaatcccctggaggtccctcccttctctctcgtccacgggaacaggactctggcagggagcaacatcggcggcatggcggacacgcaggagatgatcgagctggcggcgaagcacggcgtgacggcggacatcgaggtgatcggcgccgacgacgtgaacacggccatggagcgcctcgccaaggcggatgtcaggtatcgcttcgtcatcgacgtcgggaacaccctccacgccgccgccgccgagtga</cdnaseq>

Protein Sequence

<aaseq>MAPTAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVA IKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCM VNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMP LDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISS SPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGK MILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGAD DVNTAMERLAKADVRYRFVIDVGNTLHAAAAE</aaseq>

Gene Sequence

<dnaseqindica>4928..5139#4176..4843#3788..3901#201..307#gtggacgtttacgcgtgtgttgtgtgcgccagtgaggacggccacgcacgacgcctcttctcctctcgccgtctcgcgcaatcgcgcggccacaaataacgccgctccaccttttcgctcccggctcctcctcctcctctcatcctctcctctcccactccacacccaggcacccagctcgagcgcgactcggcaaatccatggctcccacggcggcgtcggcggcggcgggggaggagcagcaggcggtggggctggcggcgcgcgactcctccggccacctctcccctttcgccatctcccggaggtacatatgcaaccatatacgtcaccatcgacgccctacctacctagctagctgtcgtcgcatgcgtgcgccggcctcgtcgccgccgctgccgtggtgggacgacggtcgtcggcgtacggacggcggtggtctccggccacttggggcgctctgtccgtacgtacgtacggtggtgtgctttctcatgtttctgccgaatagtatatatatagtgtttatttgttcccatggacttgacgtctagataacgatattttggccgtgtttagatccaaaaactttttctttaaagctttcaaccttttcatcacatcaaaactttcctacatatataaacttttaacttttctattacatcgttctaatttcaaccaaacttttaattttgatgtgaactaggatacggtttatcaaaagtattgctggaactggaacctagagcctcatcgtttggcatattcatatgcttatcagccaaaatttgaattttcaacgttaaatttggagctgattttgggttttttcgtcgaagtttatttttcggcctttacttttagattggtaagaacacatatataaaagttttatttacaaattgattttcgtttgtaaatatacctccgaaaatatgccaaacggtgaagctgctagtttctcgtgcaaatttcatatgaatttcgctggtaactactgtgacactttaatttgcaaattcctctaagttcacctgtgagttgattaataattaattgggtgctcattttggaatctattactccctctgtcccaaaatataagggattttggagagacgtgacatattctattactactaatctggacagactatatgtctaaattcgtaatattaggatatgtcacatcccttatattatgggtagttccctaaaagttttttttttttgaaaaacatcacatcgaacccttgaagacatgcatggagcattaaatgtagatgaaaaaaactaattgcacaattatgatggaaatcgcgagacgaatcttttgaacctaattagttcatgattagccataagtgctacagtaacccacatgtgctaatggtggattaattaggctcaagagatttttgtttcgcggtttccagccgagttattaaattaattttttcattcatgttcgaaaaccccttccgacatctggtcaaacatctgatatgatacctaaaaatttttatttcaccaactaaacaggctctatgggacggagggctagctagtttcattaattgcttgcatctattctgctctgtttccttctattacaaagaatatttgaataataaaatgatatgtttaggtgaatataagtagtcaagtagtagtactgttgattgctgctgccttcaattatgtgttcctgtctgggcaaatctcaactgcagataactgttccatgtagcgcaggcaattgcaggaatttgcatgctctatatataaaaggaaaaagtacgaattaccccccgaactatcgcggtcgtccgaattaccccctaaactataaaaccggacattcttcatccccaactatgcaaactagacgaattacccccctcgaattaatttagagcggttttgttcaacgtggcgcacacgtggcaatccagtcagcggtttttaattaaaaaattgtgggacccgcatgccatactcttctcttcttcctctctctctatagagctctctcgctttttctgtctcgtggctcgtggggacggcgaggatggcgacggcggaggcagcggcggcggcggcgaggcgaggcggcggcggaggcagcaatcgcggggaggcgagtgacggtgcagggcggcggcagaggcgagcggcggcgggagctcgcactgctcgcggaggaggcgaggcggcggcggcggcggcggaagaggcgagcggcggcggggtgcagcggaggaggcagcggcggcggcgaggcgaggcggtcggcgagcccggtcgagcagcgccccctccacggcgaacccaccggcggtgacaccgaccgccacgcctataccctcccccatctttcgacggctgaccgccacgcctctcccctaccaaatcaatatcacctggcgccagacgcatcataatgcagccatgcccgccacatcaactcccctgggatagatcgtccagcagcggcatcaccacagctctgccgccaccgctccgtccgccgtcgccgtcctcgccgtccccgcgagccacgagagagagagaatagagagagaggaagaagagaagagtatggcatgcgggtcctacaattttttaattaaaaaaacgctgactggattgccacgtgtgcgccacgttggacaaaactgctctgaattggttcgagggggataattcgtccggtttgcatagttgggggtggagaatgtccggttttgtgttttaagggggtaattcggacgaccgcgatagttcggggggtaattcgtacttttttcctatataaaatatacaatcatttatgtgggccttctcatctttgtttagccttttcaagtacctattgtgacttgtgtggtcaaaatctttttctaaatttatgtgggaaaagaactgaatcctgtaatgcaaatatgcacgtgttccgacttgtgagttcttgctggtggattagcatgttttggccgtctcttgttacttctgcttgccaaagcgtttacggaagcatcaaggtgtttataagaattactatttacaaaattacaaggttttacatttcgatgacaaaagttacatccaccgaaatttttaagtttccaatgttttgataaattatttttgaacttcttaacaaaatttgatcagctacgaggccagcacatactactagctagcgttgtgcatctcaattttggaaatttcaaaccttaattcgctattttggttgggcatgcatgtttgtcctgtgtcgtcgaactgtgcagccatgtttttcttttgggattttgtgagctaaaatccattctggttcttttcatcaattggctggctagtggctcacttttctggcagctggtcggttgcagtacattcacaaccttgaaattttgtgatagctacttggctgcactgcatatggtggttgatgagtccatacttttctggtcctgaataatttgtcttttccaaacgggtagtttgaatttgctttagttactggttatggttgtaatttgctgaatctctttttgcggtcatatttactagtatggctgtatcgatggacagctttggacgatctgcatgaacgaaattcataagtcaacagaacagggttaagtcaactaatttgtttggtttcagtttggggtgtatactttgcatataggatcatctgaatcaaaatctttcttctggctgcattacaattatgcattgtagtagtttctgataattacttgcaattctgcaggagcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgacctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggtaatggaatttccgaaaccccgcaccggcacgctcaaatctcgtccgaaattttctgttttttacattttttttgtgaatttggtctaattttatttaaattcagtcaaattttcaaataatttcgtctcgaaatttctaaaattttggcaacccccggcataaaatccaatttcaaaattgaaaaccctgatcaagcctatatccatggctatctgcttctgaaaattttaaacaaacacaagcttgaacctcccgatcgacgcgtatgcaggcacgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcgacagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaacaatggcttcgagaaccactgcccggagggcgtcttcacctacaactccgtcgacaaggacggcaccgtcacctacggcggttactcgagcatggtggtggtgcacgagcgcttcgtggtcatgttcccggaggcgatgccgctcgacgtcggcgccccgctgctgtgcgccggcatcaccgtgtacacccccatgaagtaccacggcctgaacgcgccggggaagcacgtcggcgtgctcggcctgggcgggctcggccacgtcgcggtgaagttcgccagggcgttcgggttgaaggtgacggtgatcagctcgtcgccggggaagaagcgggaggcgctggagcggctcggcgccgacgcgttcgtcgtgagcagcagcgccgaggagatggaggccgcgaggtccaccatggacggcgtcatcaacacggtctccgccaacacccccatggcgccgtacctggcgttgctgaagcccaacgggaagatgatcctcgtcggcctcccggagaatcccctggaggtccctcccttctctctcgtccacggtaagcaagctccatcgtcgagatcgagctcgatcgccaccgccacggctagctgcaccttgatgatttatgatgatgatgcagggaacaggactctggcagggagcaacatcggcggcatggcggacacgcaggagatgatcgagctggcggcgaagcacggcgtgacggcggacatcgaggtgatcggcgccgacgacgtgaacacggccatggagcgcctcgccaaggcggatgtcaggtatcgcttcgtcatcgacgtcgggaacaccctccacgccgccgccgccgagtgatggcatcgcctgcaaactattcgtgtggtctgtaatctgtatgaaattgttcatggtacgtacacgatatatagattgtggcgtgtcatggcgtataggaatgaacccgatcgaggaagctattgttggtagtctgatgctagtcagctcagtgtttgactgtttgcatttacggattgaaattgagctttgtgtggcctaagttttattttctaaagatttcaagtgaatttcgttttattcgaatgaaattccagatcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0430200, RefSeq:Os10g0430200