Os02g0649400

From RiceWiki
Revision as of 02:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0649400| Description = Protein of unknown function UPF0017, hydrolase-like family protein| Version = NM_001054118.2 GI:297599680 GeneID:4330...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0649400

Description

Protein of unknown function UPF0017, hydrolase-like family protein

Version

NM_001054118.2 GI:297599680 GeneID:4330156

Length

4569 bp

Definition

Oryza sativa Japonica Group Os02g0649400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27033631..27038199

Sequence Coding Region

27033631..27033652,27033768..27033826,27033874..27034089,27034677..27034730,27035397..27035491
,27035588..27035685,27035781..27035923,27036268..27036399,27037063..27037191
,27037738..27038199

Expression

GEO Profiles:Os02g0649400

Genome Context

<gbrowseImage1> name=NC_008395:27033631..27038199 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27033631..27038199 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgccacccacgccatcatccccactggtcgcctccacccgccgcttcgtcgcccctcgcctccgctccctcctcccggccgccgccgtctccatgtccagcacctcctcctcctccatctcggccccctccaacggccgccccgtctcaggcggcgccggggagcagcggccgccgccgagtcccctcctcccgcacgagagcctcgaggtcgccggggcgcgctgcggcctcctcgccgggttcgacagcctccgccggccgtaccgagccttccccattgtcgcgtcgaaccggcacgtcgagaccatcttcgccgccttcgcgcggtcgctcccggccgtcgcgctccgccgcgagtgcctccgcacgcccgacgatggcgccgtcgcgctcgactgggtctccggcgacgaccgtgcgcttccgcgggacgcgccggtgctcatactcctgcctggtctaacagggggaagtgatgatacatatgtaaggcatatgctgttaagagctagaaacaaaggatggcgcgtggtggtgtttaacagccgtggatgtgcaggcagtccagtgactacagccaagttctattcggcatcatttactggagatctccggcaagtagttgatcatgttttaggacgttttcctcaatctaacgtttatgctgttggctggtctcttggagcaaacattcttgtgcgctaccttggagaggaaactgataaatgtgttctttctggagctgtgtctttgtgcaatccattcgatttggtaattgcagatgaagatttccacaaaggatttaacaatgtctatgacagagcccttgctaaggctctgaggaatatatttaagaagcatgcacttctttttgaaggattggaaggtgaatataatataccaaaggcagcgaatgcaagatcagttagagactttgatgaagggctaacccgagtttcatttggcttcaagtctgtggatgattattactccaactcaagcagctcagattccataaaaaatgtttccatacccttattgtgcatacaggcggataatgacccaattgcaccatctaggggaattcccagagaagatatcaaggcgaacccgaactgcctactgatagtaacaccacagggtggtcaccttggatgggtggcaggtgaagatgctccatttggatgcccttggactgacccaattataatggagtttttagaatatgttcataacgaaaagaactctagtaccaagggtagcatctcatatgagcagcagagtgttacacaaacgtcagccccagatgtctccgtgcatgcatgtcttgtgcacatagttgttaggtcgagatgctctacagtgctccaggatgacaggttctacgttattgagttgtga</cdnaseq>

Protein Sequence

<aaseq>MAAPPTPSSPLVASTRRFVAPRLRSLLPAAAVSMSSTSSSSISA PSNGRPVSGGAGEQRPPPSPLLPHESLEVAGARCGLLAGFDSLRRPYRAFPIVASNRH VETIFAAFARSLPAVALRRECLRTPDDGAVALDWVSGDDRALPRDAPVLILLPGLTGG SDDTYVRHMLLRARNKGWRVVVFNSRGCAGSPVTTAKFYSASFTGDLRQVVDHVLGRF PQSNVYAVGWSLGANILVRYLGEETDKCVLSGAVSLCNPFDLVIADEDFHKGFNNVYD RALAKALRNIFKKHALLFEGLEGEYNIPKAANARSVRDFDEGLTRVSFGFKSVDDYYS NSSSSDSIKNVSIPLLCIQADNDPIAPSRGIPREDIKANPNCLLIVTPQGGHLGWVAG EDAPFGCPWTDPIIMEFLEYVHNEKNSSTKGSISYEQQSVTQTSAPDVSVHACLVHIV VRSRCSTVLQDDRFYVIEL</aaseq>

Gene Sequence

<dnaseqindica>4548..4569#4374..4432#4111..4326#3470..3523#2709..2803#2515..2612#2277..2419#1801..1932#1009..1137#1..462#atggccgcgccacccacgccatcatccccactggtcgcctccacccgccgcttcgtcgcccctcgcctccgctccctcctcccggccgccgccgtctccatgtccagcacctcctcctcctccatctcggccccctccaacggccgccccgtctcaggcggcgccggggagcagcggccgccgccgagtcccctcctcccgcacgagagcctcgaggtcgccggggcgcgctgcggcctcctcgccgggttcgacagcctccgccggccgtaccgagccttccccattgtcgcgtcgaaccggcacgtcgagaccatcttcgccgccttcgcgcggtcgctcccggccgtcgcgctccgccgcgagtgcctccgcacgcccgacgatggcgccgtcgcgctcgactgggtctccggcgacgaccgtgcgcttccgcgggacgcgccggtgctcatactcctggtatgcctgtcgctttccctctcgtagtctcgtgtgtggttgcgcgctgtatgcctgtatacatcgagcgtcaatgcatttgctggtagttagaaatgaatcgatgaatgagatttgattcgcattgggattgggatagtattttttttgttcagaaatggccaaataacactggtaggatgactagtccaggatcgaagtagtctagtgttcagagtggctaagtgaaaagcaactaagcttttgccgtcataatatttcccccaaacgggagattctagcaacatttcgttgacctgctccaaggaacaggttcacgacatctcagatgacccattgaaagcatctgacagaactaaaattaatcgtccaatgtgcagtcaaagacatccactccgtatatgaccacagaactgaaatcaactgatctgacttctattttaccttttatctttactgttagatggccagtgcttatctgtagttcagacatgcatttaactagcttatggttagtgactaatgcttaaagttcgacatcggcagcctggtctaacagggggaagtgatgatacatatgtaaggcatatgctgttaagagctagaaacaaaggatggcgcgtggtggtgtttaacagccgtggatgtgcaggcagtccagtgactacagccaaggtactttatcaaatattttattaatctcattgtattcactatattcagtagatcctgaaaaatcaagtaacaattgaaaaaagaagtcagaatcagttgatcaactttactctctcagcttgtagaggttgtttattatgggactgtttttcagattttcatcctgtctgatacatgtagcttgcactttagttggttctgatcactcttaattaagctgaaggttgtttatgctcttgctgggaatatgacatgagccacctacttcagcaccatatggtgaagggctaatccatatggctcctaattccatggtagtgtttggcactcagatatgtagtcaacaatgaaaggttaattcagttttgcacttcattgttgacctttttttttctagagaacatttcttcctattatattgggaaaaaaaatggttgtcttgtgtccttcaaacttatcagcatcttttggctaacctgatctataatgcagacatattggcaagccaccattcaccatgttcataagccttaatattgaatattgtggaggaaacctacgaattagcagactgtataatataatggaatcaaatcacatttaaagcaaaaaaacgctacaatatctcgtcttcttaaaacgttattttcctgtcatgtgcagttctattcggcatcatttactggagatctccggcaagtagttgatcatgttttaggacgttttcctcaatctaacgtttatgctgttggctggtctcttggagcaaacattcttgtgcgctaccttggagaggtgagttctttactcattgatgatgagcctacagttctacacaacagcattttttttccttgtgccatatttatcagggtttatttcatcttgaagtcatatgatttatgtactaccttttgtagctgatgatgactaggagttgacctatatatgtgccacttttgtttgattcagtgtgtgatttaatccaatatgttttaaacttatggacttgctcctttttatcacctaataatttgatatgtgtttttttttctgcattaggttatatagaattgatcccaaggcacgctttactctaacagtctgaaactttacagctatatgttttctctttccaggaaactgataaatgtgttctttctggagctgtgtctttgtgcaatccattcgatttggtaattgcagatgaagatttccacaaaggatttaacaatgtctatgacagagcccttgctaaggctctgaggaatatatttaagaagtattcttctgttcacctttcatcaaatctaaattacactgctctccttcaatgaattctaacagttgacttttagggaattcataaaattttaggcatgcacttctttttgaaggattggaaggtgaatataatataccaaaggcagcgaatgcaagatcagttagagactttgatgaagggctaacccgaggtttgaaatgacatcaagcataactcttaccggatgctattcattttttttctctgttgggacccgcatttaaaattacacttcaattgtatgcagtttcatttggcttcaagtctgtggatgattattactccaactcaagcagctcagattccataaaaaatgtttccatacccttattgtgcatacaggtgaaactactagttctatatgcttcgctcacacattaggaacaacaattatcttattacttagtttgatagtatcattttgtcatccttagggaacagtaaaaatatttagtcaaaattgtaaagcaaaaatagagcaggagtatctcaatgcaagtcaactcatggcctcttaattgtgtaattttttttttagaaaatggattaaaatctggcctctacatccacaatggatgtacacagcccacttaattgtgtaattgaaatgccaggggaaaaaaacttttgattgcttgccttggtcttgccaatatagtacaaattacttcaataattctagatgacaatagttacggtattgcacttccattcacacattacttcaagtcggcactatggaattcatagagcaatcatggaataaggaatacatgaaggctttaaaagtagttagatctgtttgtacttccatagacatgctggaaaacaaggtcaatgctcaacagtttgtattcagttgtcagtactggttcatatattatacaatgaaaacaatttggctttctctctcaaaaaagagaaaacaattaggccgtacaatcacatattaagggttgcttagatattttctgctatagttttttattcttgcttaattatgtgcaggcggataatgacccaattgcaccatctaggggaattcccagagaagatatcaaggtattcgcttgttgcagtttgtactttgtagtatgcaccctactggaccctattactcagcgttgatctcttgcataagaacatgaggccagcataccgagtctaattcatgagagttctgttttaagtcaacaaataagagtgcatgcagatccaaagggtgaaaagtagaactttgttacttctgtgtactgtaacttgttgattaaaagtacaatttccgggtcgtgctaactgaaatgagaatcatatctaactgggattcaggtactcttatgtggggggttttgttttattaattaatgagtgaattgaactatacaacaaagacaacaaatttgggtttggctgtaatgccatagtctaatgcgtctaattggagagtcgatctttctttttccacatcaccaagatagtcatgaatcctaccaagataggatagaaaactcaatagggtactgcacctaccttttacactgagataactgaaggcctgtaacttatgattcattcaatagttatgtatttattctgctctgtgttgctctaaaatgactcaagaaaatcttgttattttatcttttcaggcgaacccgaactgcctactgatagtaacaccacagggtggtcaccttggatgggtggcaggtgaagatgctccatttggatgcccttggactgacccaattataatggagtttttagaatatgttcataacgaaaagaactctagtaccaagggtagcatctcatatgagcagcagagtgttacacaaacgtcagccccagatgtctccgtgcatgtgcagcgatagtaacgtttctcttgccagatttttccattcactaggcatgtcttgtgcacatagttgttaggtcgagatgctctacagtgctccaggatgacaggtacatgatcaaatctcatgcacccctagttttgttcctaagtataaatattttctgttcttccatcaatagtttgatgaatattgttcgctctgcctctgctttacttgtgcaggttctacgttattgagttgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0649400, RefSeq:Os02g0649400