Os02g0658900

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Revision as of 02:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0658900| Description = Sec20 family protein| Version = NM_001054174.1 GI:115447718 GeneID:4330214| Length = 4293 bp| Definition = Oryza sa...")
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Gene Name

Os02g0658900

Description

Sec20 family protein

Version

NM_001054174.1 GI:115447718 GeneID:4330214

Length

4293 bp

Definition

Oryza sativa Japonica Group Os02g0658900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27550215..27554507

Sequence Coding Region

27550336..27550549,27551637..27551751,27551863..27551899,27551987..27552062,27552363..27552418
,27552529..27552598,27552688..27552971

Expression

GEO Profiles:Os02g0658900

Genome Context

<gbrowseImage1> name=NC_008395:27550215..27554507 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27550215..27554507 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataaggtgactcaagctgttgagaacctaaaggaggaatggaatcaagctgttgcacagcttgaagggtgcattgctgcaattgaatcatgtgggaagatgggaaaggggacagaggaagcaagttcacttcctaggttaaacggttctgcacaggatgcactgcaattgctcaattcactacagtgcagacttgatcctctggcagagcagctacccacttttgaagaagtacagtctggccaagcaaccctgcagtcatggaaggaacagtatcagaagctgcgcatgaggctgagaaatgctaacttacaagcaaatgcaaacattaaaaaagctgctcaagaagagagggagcttcttctagggggtggagaagaatctaccatccgcaggcgtaatctacagacaaaggctgggatgacatcggctgcagaaagtataaccgagagcctccgccgatctcgccagttgatggtccaggaagtggaaagaagtgcaaataccttggcaacatttgatgaatcaacaagtgttcttcgtaaggctgaaggtgaatatcaaggacaccgctctttgctgatgcgtactcgtggtttgctatctacaatgcaacggcaagatgttcttgataggatcatccttaccattggttttctcattttctccttggcggtgctatatgttgtctcgagacgtattggcctgttgacactgcaaaggaagctggccgatgccatcagatcaggctcaatatcagctgaagacgttgtagcaaaagtcaagaatgtgcctgtcccagcacctgctgctcctgctcctgctcctcctatttatgatgaactatga</cdnaseq>

Protein Sequence

<aaseq>MDKVTQAVENLKEEWNQAVAQLEGCIAAIESCGKMGKGTEEASS LPRLNGSAQDALQLLNSLQCRLDPLAEQLPTFEEVQSGQATLQSWKEQYQKLRMRLRN ANLQANANIKKAAQEERELLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQLM VQEVERSANTLATFDESTSVLRKAEGEYQGHRSLLMRTRGLLSTMQRQDVLDRIILTI GFLIFSLAVLYVVSRRIGLLTLQRKLADAIRSGSISAEDVVAKVKNVPVPAPAAPAPA PPIYDEL</aaseq>

Gene Sequence

<dnaseqindica>3959..4172#2757..2871#2609..2645#2446..2521#2090..2145#1910..1979#1537..1820#attcacgcgattgacgcgagcgagggacgacgactccgacgatcttactccggcgaggcgagacgacggcgactgccgaccggcgagttcgctccatcttccccagagaaccccctcattctccctccggcgagctttcttcgacggagaagacgagacgcggacgagcgacctccctccggcgacgacaacagcctactccggcgagccccctcctccctacggtgagtccccttctcctccctccggtgagccgctaccgcctcgccgcgcgcccttgtccgccgcccaccgccggtccgccgcctcccagaccatccctctaagccccgatcccccacttccccctcccaagcgccaccctccccccacccccacatccccttcgcactcacgcgcagcgcccgttgaccgcgccgctgtcaattcgccgccctcggctgtcgcggggtcgcgcggtcgcgggatcgcgccaccgcccttggccgtcgcggggtcgagccgctgccgtcggccgtcgagctaccccgagaggccgagaaaccctaaggtaattgttgtttgcttcagtggtgctgtgatttaggattattgggaacatcttttccatttgaagccatggatggttgattgattgattgccagtgaatccagttgtagtaaatgtagatcgaaagggcatcactagggaacaatagaaattataaccatatgtttcaccaattgaactttgatttttgaaccttgtgaagctttgtacaattgttcttttgtataattatagtgcatatgtttttaagaaagtatgaaatgactagtactgaatttagatcctccactatatattatccaactagtagtttagaactacatgaaattaaacatattaggctttgggttataaaaaaaaaatcaccccttcccatttcgaatacccaacctcaaaatcctgggtatgccccacctctaacccacaagccacaggcgtagggtgccggccggtggccaccacacgcacgcccagccccagccctgtgatcgaatcaactatggttgtgatttgtgcatgtgaacaacttggtagtttaatgttaaatgttgttgccattgtagaattggtaggacttgatgaatcatttggctttatttttagggcacacttgatgttgatgatttgtcattggatgtacaaatgatctgtctctcagtctttgcaaagcagaccacatgttatttcatggttcatatatggttcatggtcccaatgaaatgattggtgagcttgtcaaagtaaatgtaagaccatcgagagtattgactgatagtttgatgctatgcttcttttttttttttttgctactgtaccagtcacttattttgctatcttttgtgaaagggtacaagcacaactagaatagcttatctgttgatttttttttcctatttgcactataatctagcccatttcttcgtatttttggtaacaaatcttgtcttagtcagtgaatgtctgtgatggtccattcagatattaggatggataaggtgactcaagctgttgagaacctaaaggaggaatggaatcaagctgttgcacagcttgaagggtgcattgctgcaattgaatcatgtgggaagatgggaaaggggacagaggaagcaagttcacttcctaggttaaacggttctgcacaggatgcactgcaattgctcaattcactacagtgcagacttgatcctctggcagagcagctacccacttttgaagaagtacagtctggccaagcaaccctgcagtcatggaaggaacagtatcagaagtaagatattctctaggccacttcccctctggtaatccccctagtcattttgttttgttttttttttatcagctggtatctgtttgcaggctgcgcatgaggctgagaaatgctaacttacaagcaaatgcaaacattaaaaaagctgctcaagaagaggtgtgtaatttttcttaagagtggtaaattagcttgattgttaattgcctcggcgatgcatccttctttgtaagttaatgtgctctcacttctagttgctctttctctagagggagcttcttctagggggtggagaagaatctaccatccgcaggcgtaatctacagtaagttagttgtcccaaggtttccattaattctatatttgagaatatttgagaaactggctgctctgcgtgttgcatgatatgttcagtttacatggttgttcattgtgagtatagcatgtggagaagacacagtcacttgttattttaattaaatatttctttttataatctatactaaaaaaacgttttgtttactgcttctattatatgggcaggagtcttgtactgtcaaaatcgaacaaacatttgattttgaagcttgcagaatagtaaatactaactcacctaatgatttaggacaaaggctgggatgacatcggctgcagaaagtataaccgagagcctccgccgatctcgccagttgatggtccaggttagtgcacctgttttcaattgatattttatatgctaatgaatttttgctcttaaattttaatctaactactatacatgtttacaggaagtggaaagaagtgcaaataccttggcaacatttggtatgtttcttgtgttcctaactaaatctgtgtacaagagccaagaggcgcagttgtaattttattctaactattaaggcgaagttgtaagcgaactttaaaattatgcagatgaatcaacaagtgttcttcgtaaggctgaaggtgaatatcaaggacaccgctctttgctgatgcgtactcgtggtttgctatctacaatgcaacggcaagatgttcttgataggtaagtatcttccaccaatctttcgtatggattggagatgtatgatgtgggccatgtggccatgcggtaaaaattatgttttccgatcaataaagatcatacaaaccacatcttcacataatgcatgtgtcaactgccattcaccttttttccacctctggatgaactcctcaccttgttgcagatcatctttcattagatggcaattaaccgttgtaatctagcctactactgcagaaaatacatatcttataagactttattaggatcgcccagttggccagttctctcttatcagactgatactgcaaaatgcattgacccagaaaatgcatttggtgtggccagggtgcattctcttaattatctttgttcgaaggagtacacaagacagtccaataagatcctgtgcatagatattgcattactcattcttaatactttcatttggaaacactagtaaaatacttgtgcgatgcgatgatttatttaacataaaacatgattatgagttctcttggtaaaaaaaaatcctgcctcatgtgtgaaaaagcaatgctcttcatcttaaaaggcaaaagtaaaagagtgaagcttcttgtcttgctcaaatttcaaatggatggtacactgaagagagcaatcaaattgctcatgtggggtcaaccaatcccatgggcccacatgttggtggtggtgagggcagactcaccaccaccactagtcttttataagaaaatatactagcatattacccgtgcgttgcaacaggattttaatcaacgaaaattatcattaacctcgttgttaccattattttctgtatacatctcttaaaaagttagggagttggtggtggttgcagattcaccactcaccaccaccactattcctttttaaaggagtatagatagaaatgctcttctcttttaaaaaaaggtggaaccaaatgcgcatttgatttaccaattacgttacttgatgattccaattttcttatctgccaaacaagtttctgccggtgcaatacttagtattaatactattttctgggttgtaccaattgctaattggctttctttaccaggatcatccttaccattggttttctcattttctccttggcggtgctatatgttgtctcgagacgtattggcctgttgacactgcaaaggaagctggccgatgccatcagatcaggctcaatatcagctgaagacgttgtagcaaaagtcaagaatgtgcctgtcccagcacctgctgctcctgctcctgctcctcctatttatgatgaactatgatttacttttgtgtattgtttgtacatgtagattcagaagaaaatattcaccatcattgtcagttttatatagtaaactttaaaaattctgattaaggtctctattaactttttttaccgag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0658900, RefSeq:Os02g0658900