Os10g0431000

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0431000| Description = Similar to DNA-binding protein-like| Version = NM_001071200.1 GI:115482143 GeneID:4348695| Length = 3758 bp| Defini...")
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Gene Name

Os10g0431000

Description

Similar to DNA-binding protein-like

Version

NM_001071200.1 GI:115482143 GeneID:4348695

Length

3758 bp

Definition

Oryza sativa Japonica Group Os10g0431000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15818340..15822097

Sequence Coding Region

15818537..15818702,15819376..15819475,15819684..15819762,15819905..15820065,15820207..15820286
,15820554..15820619,15820697..15820853,15820953..15821101,15821287..15821454
,15821804..15822097

Expression

GEO Profiles:Os10g0431000

Genome Context

<gbrowseImage1> name=NC_008403:15818340..15822097 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15818340..15822097 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgtatattacaagttcaagagtgccagagattatgactcgattccgatcgaggggcaattcatctcggttgccaacctgaaggagcggatttttgagtccaagcatcttgggagaggcacagattttgacctcatgatttcaaatgcgcagaccgacgaagaatatgctgatgaagctactatgataccaaagaacacatcggtgttgattcgtcggataccaggaagaccaaggaagcctattgtaacagaaccagaagagacaaaagccatggaaggtagggtagaagaaaccatgccttctggtagtgcttttcttgctgatgcatctatgaaatatcctgaagaatctgagtgggatgacgagtttggcaatgatttatatgtttctgattcagtcccttcacagctcggtagccaggcggttgatgcatctgaaaataaagttgatgaagatagtaaaataaaagcacttattgatacatctgcactcgactatagtcaaattcctgatgggtatggtggtggaagaggctatggaagagggatgggtggaagaatgatgggtggtcgtggttttggacgtggtggtctggaacgtaggacacctcctgcaggctatgtctgtcatagatgtaaagtgcctggtcatttcattcaacattgcccaacaaatggtgatgctagatttgacatgaaaaggatgaaacctccaactggcattccaaaatctatgttgatggcaaccccagatggctcatatgcactaccaagtggggctggtgctgtcttgaagccaaatgaagctgcttttgagaaggagatagagggattacccacaacccgctcacttggtgatcttccaccagagttacgttgcccattgtgtaaagaagtaatgaaggatgctgttctaactagtaaatgctgctttaggagtttctgtgataaatgcattagggactacattataaacaagtcaatgtgtgtctgtggtgccacaagcatattagcagacgatcttctccccaataaaactctaagagaaaccatcagccggatattagaggcaccaccaactagcagtacagaaaatgtgggaagcatggtgcaagtacaggatatggagtcagctattcctgtacagcccaaggttaggtctccagctgtttctgctgcttcaaaggaagaaccaaaaagaacacctgcacctgtagaagagtctccagatgttgagagccatagcgaagtgaaaactacaaatgttgatatgagttcttcagataagaaggtccccgcattaccagatgttgttgaaggaaccatggagtctaaaattctgaaagaaaaaacaccagaagcaacacctgttgtgaaagagtcacaggaaaaaatgcctgttgtgggcgaacaag</cdnaseq>

Protein Sequence

<aaseq>MAVYYKFKSARDYDSIPIEGQFISVANLKERIFESKHLGRGTDF DLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAMEGRVEETMP SGSAFLADASMKYPEESEWDDEFGNDLYVSDSVPSQLGSQAVDASENKVDEDSKIKAL IDTSALDYSQIPDGYGGGRGYGRGMGGRMMGGRGFGRGGLERRTPPAGYVCHRCKVPG HFIQHCPTNGDARFDMKRMKPPTGIPKSMLMATPDGSYALPSGAGAVLKPNEAAFEKE IEGLPTTRSLGDLPPELRCPLCKEVMKDAVLTSKCCFRSFCDKCIRDYIINKSMCVCG ATSILADDLLPNKTLRETISRILEAPPTSSTENVGSMVQVQDMESAIPVQPKVRSPAV SAASKEEPKRTPAPVEESPDVESHSEVKTTNVDMSSSDKKVPALPDVVEGTMESKILK EKTPEATPVVKESQEKMPVVGEQ</aaseq>

Gene Sequence

<dnaseqindica>198..363#1037..1136#1345..1423#1566..1726#1868..1947#2215..2280#2358..2514#2614..2762#2948..3115#3465..3758#ttaaagcatcagttttccgctcaatttaagggcgaaggcaaaattttttgttatttactgctgttctctatcgaataatctgctctattacagaagaagagggggggggggaaaagccaacaaaaaaaatagaaagaaaaacaaaaaaaataaaaagataaattcagaagaaaagaaaaaaaaactgagtgggcattatggctgtatattacaagttcaagagtgccagagattatgactcgattccgatcgaggggcaattcatctcggttgccaacctgaaggagcggatttttgagtccaagcatcttgggagaggcacagattttgacctcatgatttcaaatgcgcagaccgacgaaggttggttcttcttagcgtcgggccctttgtgtgatttcttgtatgagtgaatgtaagcaagttgataaggccagatagtattgcgaatttgtgatagacctaggttttattgttgtttcatttgtatggtaaatctgtgactttctgatttgtgcagtcaagagttctgcattgattcagttgtataacacgaaaattgatgctctatctagtatcaatagctattatcattttttttttaccatagacgctttgaattttttgctgtcataagcctgctaggaaatggtttacaggattgttgtggataactgagtataaattggatttgaacttcaattaaaaaaatattatttgggacatcctaaaaggttttaccttttggcaaagttgagcaatctgcacttttcggttgttgagtgcatgtatcaagtattgccctcaagacttattcttttgtttgcaattggggcgctacttgtttgcatcagcaagcaatcgtaccagattatcatagggcattgcaagtgaaactgtactctggctgagccctacaatttacttgcctgttagattagtggattatgttttgaatatctttgtcttggtgggatttgggatggagttatgcaaccgaggttaaattattttcctgtggcatttgcgctttcagaatatgctgatgaagctactatgataccaaagaacacatcggtgttgattcgtcggataccaggaagaccaaggaagcctattgtaacagaaccagaagagtaccgtcttgatctttgattccatactgtacacatctcctaattcacatacatttggagccaaaccacaatttagttatatgaggggacatgctttcaaatttgttttgactgaatcacgcctctggttatgcttggagttagattcctttccctctccctttcctttctagtatgcataatttgagatgctcgctcatttgtgcaggacaaaagccatggaaggtagggtagaagaaaccatgccttctggtagtgcttttcttgctgatgcatctatgaaatatgtaagaataaagtcttctagtcttggatactatttgcccttgcagtatctgccattttatttttatttagatgtttgagctgttgcagacttgcatttgtgtgttaatacatggagctgatattcaaaatattaaattgcagcctgaagaatctgagtgggatgacgagtttggcaatgatttatatgtttctgattcagtcccttcacagctcggtagccaggcggttgatgcatctgaaaataaagttgatgaagatagtaaaataaaagcacttattgatacatctgcactcgactataggtgagtgatgtactggattagaaattcaccacattgactgcttgaactgcaattagttctagtttttatgctatgggatgtaatgctatcattattatgtgctgcttttataatcatcaaactgaatgttcatgcttccagtcaaattcctgatgggtatggtggtggaagaggctatggaagagggatgggtggaagaatgatgggtggtcgtggttttggtaacctttttaccttgtctattgcttttttttttttttttttttttgcgtacaggtttataagtggcagtagtagcactgacctttgcaacatgtatacctataggtgcagcgtttatacttaaattctatgctctgtgatatactgatatgctatgttgtctgtgatatgctatgttgtctgtgatatgctatgttgtaaggttatttgcctaccttttccccttatgatcctcacttatgatattccccttcgatattctcaaggacgtggtggtctggaacgtaggacacctcctgcaggctatgtctgtcatagatgtaaagtgcctggtatgatgatgactaatgtcaagtctttggtaatgaaaaatcatgctatgctattgctcagaagtcttcatttttaggtcatttcattcaacattgcccaacaaatggtgatgctagatttgacatgaaaaggatgaaacctccaactggcattccaaaatctatgttgatggcaaccccagatggctcatatgcactaccaagtggggctggtgctgtcttgaagccaaatgagtgagtgcaaacttcaaagtttgttgaattacttctgcaatgcaaaaacaatgttacatgtgcttatcaaagaccaaacttaattttgttttgtgatagagctgcttttgagaaggagatagagggattacccacaacccgctcacttggtgatcttccaccagagttacgttgcccattgtgtaaagaagtaatgaaggatgctgttctaactagtaaatgctgctttaggagtttctgtgataaatgtaagttatgcttataaaaacatatttatttacatgtcattggtgccactgtcattttacgagtttgtctatgggataaccataaattgtgtgcttttttccttccccttatcttgatcttcatttccgagcttcaaatatgtacactttttaatgaggtggcatgctgctatgttcttttgcaggcattagggactacattataaacaagtcaatgtgtgtctgtggtgccacaagcatattagcagacgatcttctccccaataaaactctaagagaaaccatcagccggatattagaggcaccaccaactagcagtacagaaaatgtgggaagcatggtgcaagtacagggtatatacacatatatctatcacttataacagatactccctctaggttgatattacttgtcgttctatacaaggacacggtctccaaaaaattaacctaaaaacaactttgactactattttctattataatatatatataaatatcgacaaatatatgattttattgaagtacattttaagactaatagacatatggtctccatatttctaagaccaatattttaaaaattattcatagtcaaggattttaaagtttgacttcacccttgtccaaaacgacaagtattatcaacccggagggagtacttagtatagactatttgaactgatgctagtactttgcgcagatatggagtcagctattcctgtacagcccaaggttaggtctccagctgtttctgctgcttcaaaggaagaaccaaaaagaacacctgcacctgtagaagagtctccagatgttgagagccatagcgaagtgaaaactacaaatgttgatatgagttcttcagataagaaggtccccgcattaccagatgttgttgaaggaaccatggagtctaaaattctgaaagaaaaaacaccagaagcaacacctgttgtgaaagagtcacaggaaaaaatgcctgttgtgggcgaacaag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0431000, RefSeq:Os10g0431000