Os02g0661100

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Revision as of 02:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0661100| Description = Similar to Trehalose-6-phosphate phosphatase| Version = NM_001054180.1 GI:115447730 GeneID:4330221| Length = 4017 bp...")
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Gene Name

Os02g0661100

Description

Similar to Trehalose-6-phosphate phosphatase

Version

NM_001054180.1 GI:115447730 GeneID:4330221

Length

4017 bp

Definition

Oryza sativa Japonica Group Os02g0661100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27654468..27658484

Sequence Coding Region

27654767..27654817,27654901..27654993,27655089..27655229,27655341..27655418,27655514..27655615
,27655788..27655844,27655963..27656061,27656172..27656243,27656332..27656472
,27656590..27656871

Expression

GEO Profiles:Os02g0661100

Genome Context

<gbrowseImage1> name=NC_008395:27654468..27658484 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27654468..27658484 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttgagcaatagctcacctgtcatcaccgatccggtggcgatcagccagcagttgttgggcggcctgccttcaaatctgatgcagttttcagtcatgcccggtggctactccagctctggcatgaacgttggtgtcagtaggctcaaaatcgaggaagtccttgtcaatggactgcttgatgccatgaaatcctcgtcacctcgcaggaggctgaatgtagcatttggcgaggacaattcatctgaagaagaagaccctgcttacagcgcttggatggcaaaatgtccttctgctttggcttccttcaagcaaattgtagccagtgcacaagggaagaagattgctgtgtttctagactatgacggcacactgtcgcctattgtggatgatcctgacaaagcagtgatgtctcccgtgatgagagctgctgtgagaaatgttgcgaagtacttccccactgcaattgtcagcggaaggtcccgcaataaggtgtttgaatttgtaaaactgaaggagctttattatgctggaagccatggtatggacataatggcaccttcagcaaatcatgagcacagtgctgaaaagagcaaacaggccaatctcttccaacctgcacacgactttctgccaatgatcgatgaggttaccaagtccctcttgcaagttgtcagtggaattgaaggtgcaactgttgagaacaacaaattctgcgtttctgtacattatcgcaacgttgcagagaaggattggaaactggtcgcacggctcgtaaacgaagtgctggaggcttttcctcgtctcaaagtaaccaatggacgaatggttttagaggttcgtccggtgatcgactgggacaagggaaaggctgtggagtttctgctccagtcactcgggctaaatgactctgaaaatgtgatccccatctacattggagacgacagaactgacgaagacgctttcaaggtacttcgacagcgaaattgcggttatggaatactagtttcacaggttcccaaggaaactgaagccttctactcgctgagagatccatctgaagtgatggagttcctcaatttcttggtgagatggaagaagcactcagtgtga</cdnaseq>

Protein Sequence

<aaseq>MDLSNSSPVITDPVAISQQLLGGLPSNLMQFSVMPGGYSSSGMN VGVSRLKIEEVLVNGLLDAMKSSSPRRRLNVAFGEDNSSEEEDPAYSAWMAKCPSALA SFKQIVASAQGKKIAVFLDYDGTLSPIVDDPDKAVMSPVMRAAVRNVAKYFPTAIVSG RSRNKVFEFVKLKELYYAGSHGMDIMAPSANHEHSAEKSKQANLFQPAHDFLPMIDEV TKSLLQVVSGIEGATVENNKFCVSVHYRNVAEKDWKLVARLVNEVLEAFPRLKVTNGR MVLEVRPVIDWDKGKAVEFLLQSLGLNDSENVIPIYIGDDRTDEDAFKVLRQRNCGYG ILVSQVPKETEAFYSLRDPSEVMEFLNFLVRWKKHSV</aaseq>

Gene Sequence

<dnaseqindica>3668..3718#3492..3584#3256..3396#3067..3144#2870..2971#2641..2697#2424..2522#2242..2313#2013..2153#1614..1895#agcactccatcttcctccatctgcgtattttccaacacatctctcttgcagttcgtttcaagtctttcattaaggtgtgcgtcttcttctctttgtcattcttctagatcacctgcttatacttctgcatttctgcatgcaatgctcagttggtccaacatttgttctttgaacttactgcatgctcttttgatgtctttgtttctgcaaaaatataggcaccgaagtgccaaaactgaacttcggtgcctttctcactgagaaaacggatacttttctgttgtaaaggatgctgtgattgttggagttcatgtaggtcctcgaaaagtgtgaaaacagccaaaaaatgcactcgttctgagaattgcttgagaactgtaaacatggccacaatttgctagagctagctaaaactgctatcggatccacttatttccttacctttttcttgattttttcttgtttcatctccctagggttgttaatgttcagcatatccattgacattttcttttagacacccagttttcttattttctgaccgggtcaatttccactcaaagttcgtatttgaaaacatgttcgatgaccaaaacaattttttcaagtctattcttcttcaagtcaattctcctaaagatttccaacttgatttttttttcacaataaaaatctctaaccttacgttatatgcttccatcacacagtttagtagaatatataagctgacgttattgtgcttccatcatggctaatagcgatgtactagtggttgctcttttaaggttggtgcccatggttaattgcgttctgaactttgacgcgttaggtttacctaccatttctttgagttcagaaacactcattaagacattaacccatgggcccaagcacacatggcctcagtgattagtccagcatatcgttgtagtagatatcaagacattgagcctaactgtgttaatgatcatccttttcctccggcagatattttattcttttttattcgactcagagtgacattgtactgctaaaccacagttgatgccacacttaatcctgggcccattttttttctttccttggcatcttgtagtattttcccttttgttgatgttgatttgttcctttgctcatgaatgacaaggacacacatttattacggcctgacacttgaggaggacatggctgtcgttttacttctgtgtaaatgaaaagatttttccttcttgatttatgcagtaaaactttctgaacatttgaagtgcaacggagctggcgttttatggcttttcctatgaagcaatccacatctctgatatagatgtgtactcgttctgaacatgacaaggtacggcacatcctaaaactgttactactattttcatctcatggaaaacaagagcagtttctctaatactttgtcttacattgtctgatcagttctcaggtatttctctgttgatgaactgcctccacacctgcagtgacaagaagacactgaagaagtggtttttcatcgacaagacagttggctaaattcagcagtgcactcgtccttaaagcgatcgatcatacttctttcttgatctcatcatcctaaattttcccaaatggatttgagcaatagctcacctgtcatcaccgatccggtggcgatcagccagcagttgttgggcggcctgccttcaaatctgatgcagttttcagtcatgcccggtggctactccagctctggcatgaacgttggtgtcagtaggctcaaaatcgaggaagtccttgtcaatggactgcttgatgccatgaaatcctcgtcacctcgcaggaggctgaatgtagcatttggcgaggacaattcatctgaagaagaagaccctgcttacagcgcttggatggtaagctacaatggttacattggttgtgtttctgttggcctaataagttgtactagtaactcgcaatccttttcttttcgtggacagtactgacatatgtgatgacttgtgttgcaggcaaaatgtccttctgctttggcttccttcaagcaaattgtagccagtgcacaagggaagaagattgctgtgtttctagactatgacggcacactgtcgcctattgtggatgatcctgacaaagcagtgatgtctcccgtggtaagtctgaatataaactctgaccaataactagcatttcttggttaatgaagagctgctttgaattaaattaaaaacttttcctcagatgagagctgctgtgagaaatgttgcgaagtacttccccactgcaattgtcagcggaaggtcccgcaataaggtaccgaaaatatggttgcatgcattttagtgtactagtattagaagccaagtgattgcatatgcaagtgtatgtcttatcttacatatggcttacttatctctatgcaggtgtttgaatttgtaaaactgaaggagctttattatgctggaagccatggtatggacataatggcaccttcagcaaatcatgagcacagtgctgaaaaggtgaggatttcttgcctatgtttctacaaatagagtgaaaaagtctaccttttttgggggcattctaacaaatatgttctagtgtaaaatactgactatggcttaattccaactacagagcaaacaggccaatctcttccaacctgcacacgactttctgccaatgatcgatgaggtgcatttctctttcaactttgaagtaaaaaagttgtattgctctatccagtttaacgcaaatataaaacgattccatcatctcattattattcatataaattactgtgattagtcctgatgggtgtgcaaaagttttgtgctatttgttaacaaactttttatttcaacaggttaccaagtccctcttgcaagttgtcagtggaattgaaggtgcaactgttgagaacaacaaattctgcgtttctgtacattatcgcaacgttgcagagaaggtaaaaactgtttttttttccgtcatacttttttctctgctcccaagcgcttggaaaatgaaaattcatctgacaatattgcttcttgtttgcaggattggaaactggtcgcacggctcgtaaacgaagtgctggaggcttttcctcgtctcaaagtaaccaatggacgaatggtaagaacgctatgccaagtctatttagctgtacactgaaacttacccatttcctggtaatttgcacatctatcaaaccctgtgctgaatattctggaaatatatcttcaggttttagaggttcgtccggtgatcgactgggacaagggaaaggctgtggagtttctgctccagtcactcgggctaaatgactctgaaaatgtgatccccatctacattggagacgacagaactgacgaagacgctttcaaggttcatatattttctggagaacacgtagtgctgtatatcctagtcgcatctttgattcagtgtaaactgatatagcggtcatttggtttaaccaggtacttcgacagcgaaattgcggttatggaatactagtttcacaggttcccaaggaaactgaagccttctactcgctgagagatccatctgaagtaagctcaaaagaatatctttcttcttccttgggtgattttcattcgacgtgttcatcattaactgtttgcttatcgtacaggtgatggagttcctcaatttcttggtgagatggaagaagcactcagtgtgaaaaaaagaagacagtctgagcaggttttactaatactactccggcagaaataactgtagtttccgaggcgacaattttgaagcattggacgctgtagatagatgtaataactctctagatatgtggttccaattcattcttattgatcgatgttattgtattgttcatgttctccaccgctgagaaaaattaatcagtgatggttgatccggtctcttgccattgtaagttgtaagcaagaaggccctcttcttagtatccatgctgatgaacgaaattaaaaccttcatttttcgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0661100, RefSeq:Os02g0661100