Os10g0432200

From RiceWiki
Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0432200| Description = Similar to 68 kDa protein HP68| Version = NM_001071202.1 GI:115482147 GeneID:4348698| Length = 4874 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0432200

Description

Similar to 68 kDa protein HP68

Version

NM_001071202.1 GI:115482147 GeneID:4348698

Length

4874 bp

Definition

Oryza sativa Japonica Group Os10g0432200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15875799..15880672

Sequence Coding Region

15877577..15877696,15877782..15877961,15878544..15878813,15879118..15879363,15879522..15879635

Expression

GEO Profiles:Os10g0432200

Genome Context

<gbrowseImage1> name=NC_008403:15875799..15880672 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15875799..15880672 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctggagcttatggtgttgttacgctgccattttcggttcgagaaggtatcaatattttcctggctggatttattccaacagaaaatcttcggtttcgagatgaatctcttacattcaacattgcagatgcccaggaggatgctgagattaagacatatcagcggtacaagtaccctaccatgagcaaaacaattggtaacttcaagctcactgtcatggaaggtgaattcactgattctcagatttttgtgatgcttggtgagaacggaacagggaagaccacattcatcaagatgctggccggggtggagaaaccagacactgtggacggaattgatattgaagttcctgaattttgtgtgtcctacaagccacagaagcttgcatcaacttaccagggtacagtgaggcaatttcttcatgagaaaataagggattcatacactcatcctcagtttgtgtccgatgtcatgaagccactaaaaatgcaacaactcatggaccaggaggttcagcatttatcgtgtggacagctccagagagttgcattatgcatttgtcttggaaagcctgcagatatttatttgattgatgaaccaagcgcatctctcgattcagagcagcgtcttgttgcctcaaaggttatcaaaagatttatcatgcatgcaaagaaaactgcgtttattgtcgagcatgatttcattatggcaacctacttagccgacagggttatcgtctacgagggacagcctgctgttgactgtactgccaatgcaccacagtctttgctatccgggatgaataagttcttatcacatcttgagattacttttagaagagatccaaccaactttaggccacggataaacaaactggattctgcaaaagacagggaacagaagtctgcaggatcctactattacctctga</cdnaseq>

Protein Sequence

<aaseq>PGAYGVVTLPFSVREGINIFLAGFIPTENLRFRDESLTFNIADA QEDAEIKTYQRYKYPTMSKTIGNFKLTVMEGEFTDSQIFVMLGENGTGKTTFIKMLAG VEKPDTVDGIDIEVPEFCVSYKPQKLASTYQGTVRQFLHEKIRDSYTHPQFVSDVMKP LKMQQLMDQEVQHLSCGQLQRVALCICLGKPADIYLIDEPSASLDSEQRLVASKVIKR FIMHAKKTAFIVEHDFIMATYLADRVIVYEGQPAVDCTANAPQSLLSGMNKFLSHLEI TFRRDPTNFRPRINKLDSAKDREQKSAGSYYYL</aaseq>

Gene Sequence

<dnaseqindica>1779..1898#1984..2163#2746..3015#3320..3565#3724..3837#tagggattgaagtcacctctactgttgatggttactatctttctcaacaccgttatattgaggatcttcttgctcagtcaggcctcactgatagtagaacaactactactcctatggagttgcatgtccgacttcgttccacagatggaactcctcttgatgacccctcacggtatcgacatcttgtgggtagccttgtctatcttactgtcactaggccggatattgcttatgctgttcatatcttgagtcagtttgtcagtgctccgatttcagttcactatggtcacttgcttcgtgtcttacgatatttgaggggcactacaactcaatgcttgttctatgcagcatctagcccgcttcagcttcgcgctttctcggactctacttgggcaagtgatcctattgatcgtcgctctgtcactggctattgtatttttcttggcacttctctcctcacttggaagtccaagaaacaaacagcggtatctcgatctagtactgaggctgaacttcgggctcttgccacaaccacttcagagattgtgtggttgcgttggctactagctgattttggtgtctcttgtgatgtcccgacacctcttttatgtgacaacaccggagctatacaaatcgccaatgatccaatcaagcatgaattgacgaagcatattggcgttgatgcatctttcacacgttctcattgtcagcagtcaacaattgctctccactatgtgccctccgagctacaagtcgctgatttcttcaccaaggcccaaactcgagagcatcatcggttacatcttctcaaactcaatgtggtagatccaccttgagtttgaaggggggtgttaaatatatatacaagctaatgtactgtatagttggcccatgtccagcccatcggatgtccagcccattggatcttgtatcttgtatatacttctctattgctaatactattgttaggttgcaagttagttaagactcctttctttgcaggatccacctgattggcatgaaatccttgcgtacttccatgggtctgaacttcagaattacttcaagcgtatggtcgaggataacctcaaggtgcatgtttttttactcgattgcctttcaccctcaatgaagtgtttctgcactgtatcatcatgtaaataaactgctgcaatacatgcaaatcatcgatgaaatcatgcatttttttttctagcaatccacctatgcttttagtcatcaagtgtcatcaagtgtagtgcttttctcaccttttgtactcccctctgtacagcctatcatgaagcctcaggttgagatcatgcacaaaaaccggaattcttttcaagtaagtgtaggccaactacttgaccggaaagatgagaggggtatgaaagatcagctgtgcaacggcctccaattgaacgaagttattgaccgaaaagtggcaaaactttctggtggtgagctccaaagagttggaatagcagcagctgccctgcaaagcgcggatgtttacatgtttgatgagccatcaagttatcttgatgttaagcagaggcttaatgctgcacgagtcataaagtccctgcttagaacaaacaggtaatttgtaaccttctttcatgattaatcttactacttttttgactgatagcttcaagaaatttaccatcatttgcctccctaattttgttttcagctatgttatcgtggtggaacatgacttgagtgtcttagattacatgtccgactatatttgctgcttatatgggtaacctggagcttatggtgttgttacgctgccattttcggttcgagaaggtatcaatattttcctggctggatttattccaacagaaaatcttcggtttcgagatgaatctcttacattcaacgtaagctaacatatgcacataggatttgagatcatttttcagtgatgaaactttcttctttactatattcgtattgtcctttcagattgcagatgcccaggaggatgctgagattaagacatatcagcggtacaagtaccctaccatgagcaaaacaattggtaacttcaagctcactgtcatggaaggtgaattcactgattctcagatttttgtgatgcttggtgagaacggaacagggaagaccacattcatcaagatgctggtacatctctctctcaccctttcctccacctcccatctctctgtcactcttatgagttcaagtacctcaaatgatacaaatagatactttgcactctagatttatctaccattattcaaggttggaataagcatttatagcagtggtatgcacaatgttgtgcctgcctcagcaattttatagattgatttgtgtcaaaaattgctgttcgcttagctaatgtgaacccggtggtgctgaaaacctaatggtatggataccattgagataatgtttggttgacaatgatgactttggtttaatgtaatttatttttctttagtttctatatttagcagtcgtctaaaagcttattagaatattactaccagctttcttaaagtgtgtgaattttgttttcttacgatattaagggttttatacttgtctttctgatgatgatgcaaatatttcttccaattgcacatataaagatttaagttatatctgtttccttgtcttaacaactattagcaatccaatttgcactcgatagttggagcattcagtatcctatgttcactgtttatcatgactcgacaggccggggtggagaaaccagacactgtggacggaattgatattgaagttcctgaattttgtgtgtcctacaagccacagaagcttgcatcaacttaccagggtacagtgaggcaatttcttcatgagaaaataagggattcatacactcatcctcagtttgtgtccgatgtcatgaagccactaaaaatgcaacaactcatggaccaggaggttcagcatttatcgtgtggacagctccagagagttgcattatgcatttgtcttggaaaggtattgtccaattttacctcaactttgcgttagtaggtatctgaaattgaatgctatttacgggaataaactctatactatttccatgctctattgtttctaaaagatccagggaccagggtatgccgtttttgcatgttgaatatactaaatgtctttctctcatgttagtatagtgcatgttaggtttaaattctagcttaatgttttggatacttataccgttatacgcaaatatttattcagactaaggatgcaaatgctgtcagcttatggatactaacttcttggttgttttttccagcctgcagatatttatttgattgatgaaccaagcgcatctctcgattcagagcagcgtcttgttgcctcaaaggttatcaaaagatttatcatgcatgcaaagaaaactgcgtttattgtcgagcatgatttcattatggcaacctacttagccgacagggttatcgtctacgagggacagcctgctgttgactgtactgccaatgcaccacagtctttgctatccgggatgaataagttcttatcagtaagtgcagccatcatccatcaaccaagttataaacttataataacttactataatagtactaactcaagtttgtttcttctttactaacttcatctttgtttccctgccctaattatttctctcttttgttaattgtcattgtggatttgtggcagcatcttgagattacttttagaagagatccaaccaactttaggccacggataaacaaactggattctgcaaaagacagggaacagaagtctgcaggatcctactattacctctgaaagtgggcacaattgttgatactttgctactaccactgtatagcattgtgcctatggtgcttgcagttgagggaacaagagcgggttcggaaaatggggcgcagcggaacaggaaggaagccatgtttggaccatttcatggaacaagtaagaagataggacaacacaaacaagagcaggaacatggtaacctcttgtggaatctactgaaatcacacagaggaaatgcaggaactgctgaggtggttaaatcagatcaaggatcctacaccaaaagtagtttggagatggattacacgatggcgcggagcattatgtcggtagggaatccaaaattctacaaaattaggcatgattgcactataggtgtttaggccttgttgagaattatcttatgctcttttgtcaacttttgtgcaggtcttcagactcaaggaattgcagaatgatcagaggtccccagccttttagaatgcctcctagtatgcatgatggtaaaggaattctctactggtaggaagtccataattccaaaaaatgttaagcattaccagcattacgcatttacgcctcttatgctgatttatcaaattttaagcaggacttcagcctcagcgatcgcaggacgcgatgagatgtcgtgaagtcatcaatgccacggcggataatgtttgcgggagtttggtcaagaagtgaaagaacttcatgggatttcgtttgttgctggtttttagactttagaatgctatttgggtttatggaatgttttgtgaacttctgagatgttttatcatgtggcgcgccaggttttttgtcccatagattgtattcgagatttgaatacaaacagtgggttttcctggcgccttgaaccagcaatttatttgctatatgctggacttgatttaactaaaaacgagtattgagttgttttatatggttggtgcgtttgttttgttctgggaatccaggagtggtcaggttcacctgtgaaatctacttcagtaaaatgtgaccaaattgagtattatactatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0432200, RefSeq:Os10g0432200