Os10g0432300

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0432300| Description = Similar to Transcription factor IID, TFIID (Fragment)| Version = NM_001071203.1 GI:115482149 GeneID:4348699| Length ...")
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Gene Name

Os10g0432300

Description

Similar to Transcription factor IID, TFIID (Fragment)

Version

NM_001071203.1 GI:115482149 GeneID:4348699

Length

2602 bp

Definition

Oryza sativa Japonica Group Os10g0432300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15882040..15884641

Sequence Coding Region

15882501..15882679,15882836..15882928,15883012..15883056,15883209..15883331,15883468..15883555
,15884354..15884496

Expression

GEO Profiles:Os10g0432300

Genome Context

<gbrowseImage1> name=NC_008403:15882040..15884641 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15882040..15884641 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccgcggcggtggatccgatggcgctggggctggggacgagcggaggaggaggaggaggcgagtcggcggtggggggtgatggggcggagccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagaacattgtttcgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatgcagagtacaacccaaagcgttttgctgcagttatcatgaggataagggacccaaagacaacagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaagaccattcaaagcttgctgcgaggaagtatgcgcgaatcgtccaaaagcttggcttcccagcaaagttcaaggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcctggagggccttgcttattctcatggcgcattctctagttatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattgtgcttctcatttttgtctctggcaagattgttctcactggagctaagtaccgcaaagagatttacgctgcctttgagaacatgttcccggtgctcactgaatacaggaaaactcagcagcgctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAVDPMALGLGTSGGGGGGESAVGGDGAEPVDLVEHPSGIV PTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV CTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHG AFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYR KTQQR</aaseq>

Gene Sequence

<dnaseqindica>1963..2141#1714..1806#1586..1630#1311..1433#1087..1174#146..288#acgaccaaaccctaacccgcgatccgcctccgccgccgccaccaccaccacccacccggatccccacctccctccccgatctcaccacctccgtataaaggcggctcggtttgaaaaatctttgcctccggaggaggagggggggatggctgccgcggcggtggatccgatggcgctggggctggggacgagcggaggaggaggaggaggcgagtcggcggtggggggtgatggggcggagccggtggatctcgtcgagcacccctccgggatcgtccccaccctccagtgagtcccccccgccacccccgcgtcgcaggcttgacgagaacgatgggggttgttcttggatgatctggatctgggatatctgaatgtgggatgtgaacttgacggggcttgtggatcttgatgggtttggggtggtggtggtggtggggagtaacagctaaacttgacggggattttgtagatctggacttgcacgggttagggttgggggaaacctgcgggttcttgatctgatacgatcttgcattggtttggaggagtgcgagtttatctgatgtggaggccgattcgtgctcgttcttggtgctttgatgtgttggaatttagcaaagggggaggggacactgatctaatttaaaacgatcaaggattgggtcttggtttcttgcctgactattctaatataagatgtggaaattataaaagacctgttcgaattattgtgtagtatttgtagttgagtattaattcgcacaatggtaatcccaatagttaagtgctgagaaatataagtggttggatttgggaatagtataggatagaacataaataaaacattgtgctgaattgaatcaaagaacagtaaggtgtacatgggttaagaatactgtcttattgggtttgtttaacttgggggttgttggtatcagacgcgttttaaatttcaaaagttgctgccaatttgctctgccggaacaagttgatattattatcttgatatatatgtgctggaaaagacgattggcatctgccttgccccaatatgttctaatcgttatgttggttatgtctcaggaacattgtttcgacagtaaatctggactgcaggttggatctgaaaaaaatcgctctacaggctcgtaatgcagagtacaacccaaaggtatagcttcagcttctgatgctttctattcagtttctttcaggaacaaaacacggaattacatgtcatgtctataatctaactgtatcatttgtgtcatgtctataatctaactgtatcatttgtgctcggacagcgttttgctgcagttatcatgaggataagggacccaaagacaacagccctgatatttgcttcgggaaagatggtttgcactggagcaaagagcgaagaccattcaaagcttgctgcgaggaaggtaatagccaatagtcatattgtttcatcactatttatgcttaggaacgcttgttgtttacatcatgcagggagaaattgttcactgatcctattttcggcttttgctgaattgctctataacaatttttatctgattatttgttagcgcagtatgcgcgaatcgtccaaaagcttggcttcccagcaaagttcaaggtaatgccactctagctcacatcaattcattcagattgattgtccttgcttatatcagcttgacgcattggaacatgatgcaggatttcaagatccagaacattgttggttcatgtgatgtcaaatttcctattcgcctggagggccttgcttattctcatggcgcattctctagtgtaagttgattacttacttttttacattgtctcagaatgcatcctttgaatttccattgaaactgatgccagttgtctgataaatatcagtgtgtcatttacccatatttcatcatgcatgtcattattttgactgttcacttgcttaatttgcagtatgagccagagctcttccctgggctgatttaccggatgaagcagccaaagattgtgcttctcatttttgtctctggcaagattgttctcactggagctaagtaccgcaaagagatttacgctgcctttgagaacatgttcccggtgctcactgaatacaggaaaactcagcagcgctggtaagtctgcaatatttcttcttgttgcgcattgcagagacccatgagcttatttctggtatatgacatgaattctttgccctgactacagagggaatgatttgtcgacagaatggggagttcgctgccgctgtacataccatcttaaggacctggctgccaagattttgagacatgcacctggcgtcattcctttttctttcctttgttcttcgtagcagtagggtaggagagcaactgcgtaaaggagagtatgtaaacaagttgatcaaagtattcttttgataaactaatgctgacatgcaagaaatgcatcctgacttgagatcatgtgttgtgtgcctgcgttctgaattgtaaagtacagtttgattgtgagagaagtggtactccatacgaagtatggaaaatatcacattcttctctctccatgcaaagcaagattcagctaacgagttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0432300, RefSeq:Os10g0432300