Os02g0667600

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Revision as of 02:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0667600| Description = Harpin-induced 1 domain containing protein| Version = NM_001054217.1 GI:115447804 GeneID:4330258| Length = 4774 bp| ...")
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Gene Name

Os02g0667600

Description

Harpin-induced 1 domain containing protein

Version

NM_001054217.1 GI:115447804 GeneID:4330258

Length

4774 bp

Definition

Oryza sativa Japonica Group Os02g0667600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27992737..27997510

Sequence Coding Region

27992927..27993232,27996109..27996294,27996940..27997461

Expression

GEO Profiles:Os02g0667600

Genome Context

<gbrowseImage1> name=NC_008395:27992737..27997510 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27992737..27997510 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacggcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcggtcgccgcgccggtcggcctactacgtgctcagccccgccgcctcccacccggacgtcgtggtggcctcgggcggcgcaggcggcggcggcggaggcgtggccgcggccgagaagatgtcgttcgcgggttctaccccggccgagtcgccgctgcactaccactaccaccactccggcgccgccgtgcaccactcccgggagtcttccaccggccgcctcctcttctccgaccagctccgctccggcgccgctgccggcgtcccctggcgacgccttgcgcagggcagcggcgccggcagcgtcggggacgacgacgacgacgaaggaggactcgccggggccgcctcgcagtggaggtgctacgccctcggggcgttcgccttcgtggccgtgttcgccttcttcctgctcgtgctctggggcgccagcaagtcatacaagccccacgtcgtcgtcaagagtgtggtgttcgagacgtaccacatccagggcggcacggaccggacgggcgtcccgaccaagatgatgtccgtcaacgcgacggtcaggctgcgcttccgcaaccggggcaccttcttcagcctgcacgtcacctccacgccgttccacctcttctacgacgacctcaccgtcgccaccggccacatggcggagttctatcagccgcggcggagcgggcgcgtggtgacggtgtccgtggtggggaagcaggtgccgctctacggcgccggcgcggagctgcacagcaagcccaacaacggccgcctcggccccgcggtggtgcccgtcaggatggccttcgtgctgcgggcgcgcgcccacatcctcggcctcctcgtccgctccaagttctaccgccgcgtcctctgccgcctcgacgtccgcgaggcaagcctcggcaagcccgtccacggcgtcgccgccgactgcgagtaccacgacgggaggtga</cdnaseq>

Protein Sequence

<aaseq>MARHAKTDSDVTSLAPSSPPRSPRRSAYYVLSPAASHPDVVVAS GGAGGGGGGVAAAEKMSFAGSTPAESPLHYHYHHSGAAVHHSRESSTGRLLFSDQLRS GAAAGVPWRRLAQGSGAGSVGDDDDDEGGLAGAASQWRCYALGAFAFVAVFAFFLLVL WGASKSYKPHVVVKSVVFETYHIQGGTDRTGVPTKMMSVNATVRLRFRNRGTFFSLHV TSTPFHLFYDDLTVATGHMAEFYQPRRSGRVVTVSVVGKQVPLYGAGAELHSKPNNGR LGPAVVPVRMAFVLRARAHILGLLVRSKFYRRVLCRLDVREASLGKPVHGVAADCEYH DGR</aaseq>

Gene Sequence

<dnaseqindica>4279..4584#1217..1402#50..571#ccctctatcgctcacgcggtcacgcccatcgcgccgcgcggctcccgagatggcacggcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcggtcgccgcgccggtcggcctactacgtgctcagccccgccgcctcccacccggacgtcgtggtggcctcgggcggcgcaggcggcggcggcggaggcgtggccgcggccgagaagatgtcgttcgcgggttctaccccggccgagtcgccgctgcactaccactaccaccactccggcgccgccgtgcaccactcccgggagtcttccaccggccgcctcctcttctccgaccagctccgctccggcgccgctgccggcgtcccctggcgacgccttgcgcagggcagcggcgccggcagcgtcggggacgacgacgacgacgaaggaggactcgccggggccgcctcgcagtggaggtgctacgccctcggggcgttcgccttcgtggccgtgttcgccttcttcctgctcgtgctctggggcgccagcaagtcatacaagccccacgtcgtcgtcaaggtgcgtctctcacctcttggcttcctcgttcactctcgttttcccaagaaatcaacactggccattttagccgtcctgcgagtagagatggtagtgtagagtgtacatttccgtttatttccttcaccttctcaaacgaacaactaagtagaaaatttagaaatgtactataacccctgtcaatctgcccaaatgttttcgattgaatgcaactatatgcaagttttgagatatcggtactggcaccgattgcccccgtcttccttccaagagaagagaaacacaagctgtgtacatccaatctgaatgcatgcatttactagaggcagcgtccgttccgacgatcgtacacgcattttgccaatgaacagctgtaggagtactcctacctagtaaaagcatccgcgaaacatgcacacaggaatactaggagaacgagtactacttaaaacaatataggagcaggagtttttgcttcctggacatcatgcggaattgcggatattgcgatcaatttgctagccgtttctgtgctggtgccattctagtgaatcaattgaaatttgaaaggagtataaaatgtagtagtgctactccattattgacttgctgtacgatttgctgttcctctccatgtgtgtgtagagtgtggtgttcgagacgtaccacatccagggcggcacggaccggacgggcgtcccgaccaagatgatgtccgtcaacgcgacggtcaggctgcgcttccgcaaccggggcaccttcttcagcctgcacgtcacctccacgccgttccacctcttctacgacgacctcaccgtcgccaccggccacgtacgtgccctttccaccaccccaaccctcgcctttctgctcgtacttctacctgaatttgcctatgccatcctcgttacgtttggtgaatctgaatggattgggtaggtgatgcggacgtttccgtgcctgattaggctggcgtaaatcgatggtagttattgctagttactgcgtaacaactcacaaacaaacgggtgaatcaagagttggatctgggctctgtacaatggatcagtagggttgtcccgattattcgtactgtgctcttcattactaacatgagttctatcacgactatagtggagtactaatctcctatgccattccgaccgtgatgccagcagtccgtggaatttttgccggtttagatcagcttttgagcatccccatgaacatcatagtgtggtggagtatactaacctactgcctaggtgcgggagaaagctaaacctaacagcacggttcccttcttatttgtctctgtccttgattagttttttcggcagctcttcactcggaagacagaacaaagttgcgttttaaaaaaccggctcctccattgtcatcctcgaaccggggatagcttgcagccttgcattgccatttgcttcctcgacggagtggatcatctcagatgagacttcgcagccatgcattggggctattctgaggcgctgttggacttaagcatgatagtgcattgttttgagaatttgagtgtgcagcagcttgcattcggccattcaggcaggacttggatttagcgttttacacacagaacctcttagcgtttacacacacacagacggtgagctcgtgagtcgttccgcagtaacaaaaatatcatctgtcaagttacccgctcggctaactgcagcgattttctttcactagaatactggtgagtctggtagtactgtgcaaagtgggggcgaagtgcatgtgatcaagtaacaaatactcctactactactagtactacacagaaccagcaaaaaggggacctggaatggaaacgcaataacacccagaggcaagcagtggcgtcattggctatcggtgggcatggtgttcacgtgactcgagtcagggatgccatcgcttgccatttgccgatatgagcagattttttgttcttgtcacggcacaaagaccagccggtaactgatgtaaggactgaccggttgagaacgactactcttcagcctccctctgctatagtttttttagaggaaaaagacaacacttccctgatgactgtcttgccgctgctgcatgcgctaccactggatactccgttgcatagtacaggcaaagagccaatgtgatatgtcaggcctttgttccatcttcaacgtcaacactcaaaaggattgccttttggcaagtactataagcacctttatataagcccttttatgttgcccctaaatttaccacgtagattaggtgatgagtcggaggagaggagttaggagagagagaatgagccacccctcatgcaaggggcaatctccacacaatctccaagaaaaatataagatgatgtgtgagagtaaactaatattggggtttgtgtactagaggtgacatgttgtaattgttatctcttaattaatgaaaagatgacatggtttaaattagacgtggcactcacctccaccataaaacttgcccttagggcatgcccaaccctccaccttggagggtatccctagctcgccccactttttcgcccgggaccatcgccctgcaaagaatcgcggacctctgcagagcgccgcgcacctctgctcgccccggctcgagaacagcgaagcacgcttggagcggcacgttggcgaggtcgtctccccgtgacggatccacgatggaagatgccgccgccgggaagctccgccggccaccgacgcatcgatctgctccgctactgtggaagaagatggcgaaggggtggactcgagagaaaggcgtacccgggaagctccgtctctgccgcgtcgctccctgccgctgacgcgtcgatccgcggccgtcgcgtcgatccacgtcgccgctgcttcgatccgccgctgccgcctcgatccccacctcctgcgcctccatctgccgccaccgcgtcgatctgtggccgcagccgcttcgatccgcgcccgctgccacgatccccacctccagcggctgctcgatctgctgccgccgggaagctccgccgccaccgctgctcgaggcgccgaggagagagaggggaggtcgtgctggggagggcgccgccggagaaggggaaatcgcgccaccaggaggacgggaatcgagccaaggaggggagcctagtgatttttagggggtatactgctaatattggatgtatatgtaaataaaaataatccaagggtttaaatgtaaaatatgaccgactgacaggtgctgcagtgtaaaaatgagatgtgggtaagggtgcgccctgcattgggcatgcccttactgcttttctatgtttcagacatcacacctttagcttacgttactttaccgtagttacagtacttttgccgtacgctttgtttactctgtgctgcggcgagggaatccttttgctgtacaagatgatggcccccagtgcgcagcaacccagccctatcatggttcatagactcattgacttgctgtgcatgttccggtctgtatttttgttccttgttttctaccggacggtaaatagtgcaagtgcaatttttctcattccgacagaaaagtttcccgtgcaataatatactggaagtacaatttattcggaggatgcacaaccaaaccgcactacagtacactgcactgaacgatcgtgttgcgtgtgtgctcactcatgcgtgcagatggcggagttctatcagccgcggcggagcgggcgcgtggtgacggtgtccgtggtggggaagcaggtgccgctctacggcgccggcgcggagctgcacagcaagcccaacaacggccgcctcggccccgcggtggtgcccgtcaggatggccttcgtgctgcgggcgcgcgcccacatcctcggcctcctcgtccgctccaagttctaccgccgcgtcctctgccgcctcgacgtccgcgaggcaagcctcggcaagcccgtccacggcgtcgccgccgactgcgagtaccacgacgggaggtgaccacgggcccttgcattcagacgctgcgtcgataccgtgggcgtggattgttaattggaagctctgaaactagacttctgggggtggtagtagtattggtaacacgaggtaaaatccaatccgttgtaatggaacaagtgttgatgctaacagtaatcctgctaattctagaaaattttacttgctgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0667600, RefSeq:Os02g0667600