Os02g0668200

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Revision as of 02:45, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0668200| Description = Similar to Transposase| Version = NM_001054220.1 GI:115447810 GeneID:4330261| Length = 3357 bp| Definition = Oryza ...")
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Gene Name

Os02g0668200

Description

Similar to Transposase

Version

NM_001054220.1 GI:115447810 GeneID:4330261

Length

3357 bp

Definition

Oryza sativa Japonica Group Os02g0668200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28013827..28017183

Sequence Coding Region

28013827..28013919,28014192..28014320,28014398..28016124,28016250..28016593,28017176..28017183

Expression

GEO Profiles:Os02g0668200

Genome Context

<gbrowseImage1> name=NC_008395:28013827..28017183 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28013827..28017183 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttctgttcatccgaaccttgtgactacttcgaatcattctacaccatcaagagacgaatcattccactacttcgaacctgatgctacgatggaggcaataaatagattggatgtgcgagataactcagatatttattcaaatgatgatataacttctccagtaatagaggatgacaacaccagtacaccaaaaaaaatatcaagaattccactcaattgctccgtttttacaccagagtgtgatgataagataaggcctgcggtagggatgacatttgaagatattgcctctgttgaaaaattttacaagtcatatgcacaccaagttgggttctcagtgcgtattgggcagcaaaagaagttggatggcgtggttcagtgcaagcactttgtgtgctcaaggcaaggatggaaacatgtgaatgataaggagattgttgatccatcgaagaaaaaaaagattaaattgaaagaaactagatgtggatgtgatgcacacatttacgtgaagctatgttctgataacaagtacacgatagcttccttggttgagcaccatagtcatggacttgtatcgccagataagctgcatttgataagatcaaatcgtgaagttagtgagagggcaaaaactacactcttcacatgcagcagagcaagcataggaacctcccaggcatataggctccttcacgtgagtgatgggggatttcagaatgttggatgcactaagagagacttgcagaattactatcgggacctaagaaagaaaattaagaatgcggatgctcaaatgtttgtggcccagctatgtagaaaaaatgaggtcaattcatcctttttttatgattttgatgtggatgaacatggcagattgaagtatgtgttttgggcagatgctacaagcaggaagaactatagtcactttggcgatatcgtatcatttgattctacgtacaccactaaccagtatgacatgatttttgcaccatttactggggtaaatcatcacttgcaaagtgtgttttatggtgctgcattcttagcaaatgagaagattccagcatatgtttggttgtttaagaccttcctaagagcaatgggagggaaagcccctacactcatcataactgacgaagatgccagcatgaaagcagctattgaaaaagtttttccaaccacggtgcataggttgtgtatgtggcatatcatggaaaaaatgtcagacaagatcggaccactatggagagaagactgcgatttaagggaaatgatgaagtcatgtgtttggagatcagaaactgctactgagttcgaatcacagtggaaatctatcattttggactttcacttggaggacaatgagtggctgtcaaataggtttgacattcgtaaatcatggattccagcatatttcatggacatatctttggctggcattctcaaaacaacttcaaggtcagagagtgcaaattcgtttttcaaccgtttcattcatcgcaagcttgctcttgttgagttttggctcaggtttgtcacatctttagaatgccaacgccaagaggagttgaaggcagataacacaagcatccatacaacatacaaacctgtaactccttgggcaatggagacacaaggtagcattatgttcacgcatgaggtttttgacaaacttcgagaagagattatagccgccagagatctttgttgtgttaaagacattgcacaatgtgatgggttgaaaattgttaccattagtgatggatctcacaagctcagggtagtccgttgcaatacaacgacaatgatagcgaactgttcgtgcaagctatttgagtccgatgggatcccgtgtcatcatattattctagttttgagaggtgaaaatcaaaatgagttaccaactgcatacatcatgaagagatgggagaaaagagtgaaaagggagaatgtgtatgacgaacaaggcaaccttatagaagagaagccaattgactcctcggaggcggcaatgagaaagaaaatatcaattgcacgcaacaaatttgaagatctcatacaaaaggctaagcactcagatgaaggcattgacttcttaacatctagtgtgttcaaccttgaggcacccttggaccaaatggtgtctaatgtcaagcatactagacatgaggagtttgagtcttttcttggttgcacaattcctactgaaattgatatacacccaccaactgatattcattcgagggggagaagcaaaagaattagaagaagcaaggatgacaatactgtggattga</cdnaseq>

Protein Sequence

<aaseq>MSSVHPNLVTTSNHSTPSRDESFHYFEPDATMEAINRLDVRDNS DIYSNDDITSPVIEDDNTSTPKKISRIPLNCSVFTPECDDKIRPAVGMTFEDIASVEK FYKSYAHQVGFSVRIGQQKKLDGVVQCKHFVCSRQGWKHVNDKEIVDPSKKKKIKLKE TRCGCDAHIYVKLCSDNKYTIASLVEHHSHGLVSPDKLHLIRSNREVSERAKTTLFTC SRASIGTSQAYRLLHVSDGGFQNVGCTKRDLQNYYRDLRKKIKNADAQMFVAQLCRKN EVNSSFFYDFDVDEHGRLKYVFWADATSRKNYSHFGDIVSFDSTYTTNQYDMIFAPFT GVNHHLQSVFYGAAFLANEKIPAYVWLFKTFLRAMGGKAPTLIITDEDASMKAAIEKV FPTTVHRLCMWHIMEKMSDKIGPLWREDCDLREMMKSCVWRSETATEFESQWKSIILD FHLEDNEWLSNRFDIRKSWIPAYFMDISLAGILKTTSRSESANSFFNRFIHRKLALVE FWLRFVTSLECQRQEELKADNTSIHTTYKPVTPWAMETQGSIMFTHEVFDKLREEIIA ARDLCCVKDIAQCDGLKIVTISDGSHKLRVVRCNTTTMIANCSCKLFESDGIPCHHII LVLRGENQNELPTAYIMKRWEKRVKRENVYDEQGNLIEEKPIDSSEAAMRKKISIARN KFEDLIQKAKHSDEGIDFLTSSVFNLEAPLDQMVSNVKHTRHEEFESFLGCTIPTEID IHPPTDIHSRGRSKRIRRSKDDNTVD</aaseq>

Gene Sequence

<dnaseqindica>1..93#366..494#572..2298#2424..2767#3350..3357#atgtcttctgttcatccgaaccttgtgactacttcgaatcattctacaccatcaagagacgaatcattccactacttcgaacctgatgctacggtatttttagtttcttctcattcatatcgttcatatacaggctagttagggatagctggtgctggcgtgcggctgctccatattgcatacatcaagagacaagattagattgcactaattttcgttcagactagctacagatttccataacctggcaagtacactgtattgttgttactgcatattaaggtaggtaactccaacataattgttcactcaaggaaattaaaggtttaatctcagttgtttgctatctgtttttttttttgcagatggaggcaataaatagattggatgtgcgagataactcagatatttattcaaatgatgatataacttctccagtaatagaggatgacaacaccagtacaccaaaaaaaatatcaagaattccactcaatgtaagtacactggcaatttaaaaattatgactgaggtgctttaaaatgcttattgcaatgtatatgtgattttgcagtgctccgtttttacaccagagtgtgatgataagataaggcctgcggtagggatgacatttgaagatattgcctctgttgaaaaattttacaagtcatatgcacaccaagttgggttctcagtgcgtattgggcagcaaaagaagttggatggcgtggttcagtgcaagcactttgtgtgctcaaggcaaggatggaaacatgtgaatgataaggagattgttgatccatcgaagaaaaaaaagattaaattgaaagaaactagatgtggatgtgatgcacacatttacgtgaagctatgttctgataacaagtacacgatagcttccttggttgagcaccatagtcatggacttgtatcgccagataagctgcatttgataagatcaaatcgtgaagttagtgagagggcaaaaactacactcttcacatgcagcagagcaagcataggaacctcccaggcatataggctccttcacgtgagtgatgggggatttcagaatgttggatgcactaagagagacttgcagaattactatcgggacctaagaaagaaaattaagaatgcggatgctcaaatgtttgtggcccagctatgtagaaaaaatgaggtcaattcatcctttttttatgattttgatgtggatgaacatggcagattgaagtatgtgttttgggcagatgctacaagcaggaagaactatagtcactttggcgatatcgtatcatttgattctacgtacaccactaaccagtatgacatgatttttgcaccatttactggggtaaatcatcacttgcaaagtgtgttttatggtgctgcattcttagcaaatgagaagattccagcatatgtttggttgtttaagaccttcctaagagcaatgggagggaaagcccctacactcatcataactgacgaagatgccagcatgaaagcagctattgaaaaagtttttccaaccacggtgcataggttgtgtatgtggcatatcatggaaaaaatgtcagacaagatcggaccactatggagagaagactgcgatttaagggaaatgatgaagtcatgtgtttggagatcagaaactgctactgagttcgaatcacagtggaaatctatcattttggactttcacttggaggacaatgagtggctgtcaaataggtttgacattcgtaaatcatggattccagcatatttcatggacatatctttggctggcattctcaaaacaacttcaaggtcagagagtgcaaattcgtttttcaaccgtttcattcatcgcaagcttgctcttgttgagttttggctcaggtttgtcacatctttagaatgccaacgccaagaggagttgaaggcagataacacaagcatccatacaacatacaaacctgtaactccttgggcaatggagacacaaggtagcattatgttcacgcatgaggtttttgacaaacttcgagaagagattatagccgccagagatctttgttgtgttaaagacattgcacaatgtgatgggttgaaaattgttaccattagtgatggatctcacaagctcagggtagtccgttgcaatacaacgacaatgatagcgaactgttcgtgcaagctatttgagtccgatgggatcccgtgtcatcatattattctagttttgagaggtgaaaatcaaaatgagttaccaactgcatacatcatgaagagatgggagaaaagagtgaaaaggtaatgtgtgcatatactctttgcttgaatcttttagttttagtcagttcatgaaaaaaattgtacagtgcatacactcactatttttttttgaaactggtttcctaaccacatcgttatcgtagggagaatgtgtatgacgaacaaggcaaccttatagaagagaagccaattgactcctcggaggcggcaatgagaaagaaaatatcaattgcacgcaacaaatttgaagatctcatacaaaaggctaagcactcagatgaaggcattgacttcttaacatctagtgtgttcaaccttgaggcacccttggaccaaatggtgtctaatgtcaagcatactagacatgaggagtttgagtcttttcttggttgcacaattcctactgaaattgatatacacccaccaactgatattcattcgagggggagaagcaaaagaattagaagaagcaaggatgacaatactggtaagaagcagggtggcaaggaacggacaccacggatctgcaagatttgcaaacaaatggtgtttcaagatttgcacaggatatgctgcctttgtttgcaaatcatgaaacttgtcctagtgccatatatatccaaacgggttttactcgttctatatgctgatgtgacatgtcatggagatgcctacgtatcggtgagatcccaatttcagtgacatattgatagttttttttagaaaattcttttatccccctctttttaattttttaaaaaacaacttcccccatcacttttctttaattttattttttctatatggctaacatgtagtcactaccatggtatgtcacgtcagcacacggattgagtcagaactcgtttggacctatgagaccccaggataagtttggggggctgaaaaatatattttgtgattctaaaatgataaatatggttgtatgcaaaataactctggacaaaattgcacttctttttttttcataacacttggtttatggggaatttcggaagtacaaattgtgtttgtgccttcaagtaaagtattatctatttgatcacagtggattga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0668200, RefSeq:Os02g0668200