Os02g0670400

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Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0670400| Description = Similar to HMGc1 protein| Version = NM_001054230.1 GI:115447830 GeneID:4330271| Length = 1473 bp| Definition = Oryz...")
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Gene Name

Os02g0670400

Description

Similar to HMGc1 protein

Version

NM_001054230.1 GI:115447830 GeneID:4330271

Length

1473 bp

Definition

Oryza sativa Japonica Group Os02g0670400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28112144..28113616

Sequence Coding Region

28112266..28112306,28112436..28112525,28112661..28112718,28112809..28112853,28113146..28113223
,28113308..28113409,28113518..28113541

Expression

GEO Profiles:Os02g0670400

Genome Context

<gbrowseImage1> name=NC_008395:28112144..28113616 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28112144..28113616 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccggcggcgccgggaagcggaagaaggccgccgctagcggcaagccgaagcgcccgccgtctgctttcttcgtcttcatgtctgagttcaggcaggagtaccaggcagcgcatcctgacaacaagagtgtcgccgccgtgagcaaggctgcaggggagaagtggcgagctatgtctgagcaagagaaggcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaaggccaacttcgataagaaggagagcacaagctcaaagaaagctaagacccatgatgatggagaaggctctgacaagtccaagtctgaggtcgacgatgaccaggatggtggtagcgatgaggaaaatgaggacgatgaagagtaa</cdnaseq>

Protein Sequence

<aaseq>MKGKADASKKGEGRLKAAGGAGKRKKAAASGKPKRPPSAFFVFM SEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFD KKESTSSKKAKTHDDGEGSDKSKSEVDDDQDGGSDEENEDDEE</aaseq>

Gene Sequence

<dnaseqindica>123..163#293..382#518..575#666..710#1003..1080#1165..1266#1375..1398#gctccgccccaaaaggccagacaacgcccgttgcgccgcctcccaaactccgcctcctcctcctccgctgcacccccgcaaaaaccctagcgcaccgacttcgcgatctccgcgccgcagccatgaagggcaaggccgacgcctccaagaagggcgagggcaggtaagatcctctctccggccgtctttgctgctgcgtatgggcggtggaggagggttttctggcggtggctgttgttggttcacatctgagcggttttgtgtttggtgttgttgttgttgttgttgttaggctcaaggccgccggcggcgccgggaagcggaagaaggccgccgctagcggcaagccgaagcgcccgccgtctgctttcttcgtcttcatgtgagtttctcgctccctcgcccacgttttgctctgttcagatctagtacagatctgtcttgagtttttgtttaatttttgttgattttcttgaattttaatattttttgtggtttttattttttacttttgcaggtctgagttcaggcaggagtaccaggcagcgcatcctgacaacaagagtgtcgccgccgtgagcttcctgacaccatcatctttttcgccactttttggctgatgtactttagatgtccaatttttttctcctctgttggttcattaggtgagcaaggctgcaggggagaagtggcgagctatgtctgagcaagtgagtttttctctgcagtgttcaaaaattagtacatgttcctattaagtgtgtgcatctgttatttagcatacatcatccatgagtatcactagaggactgtttaataattgttctggcctgtttgttaggaaaaagattgaattgctcctaaagtactagttgaatgaaaattgcaatttgtttttgaattctactcagtgaagcgcttaagtacacataagtaccatgggtggctattgatgtgacaatgtgccatatgtttttggcccttcgtgttaaattttattaggagaaggcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaaggccaacttcgataagaaggtgatgatagaataattgtgcatcctaattatagagcccttcaagcgttaggcactaattggacttcttgaattacttcttcaggagagcacaagctcaaagaaagctaagacccatgatgatggagaaggctctgacaagtccaagtctgaggtcgacgatgaccaggatggtggtagcgatgaggtaatcattaaaggaacacccggtgccctattttagcttgaatgcccaatgaatttttactactgctagttgtgttgctaatgaacatttttaatttgctctttgcaggaaaatgaggacgatgaagagtaaatagtgtatccgggggcatgaggtagcaaactgtgtcttaggtcccctattagctttactagtttgctatcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0670400, RefSeq:Os02g0670400