Os10g0434200

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0434200| Description = TRAF-like domain containing protein| Version = NM_001189241.1 GI:297727612 GeneID:9268933| Length = 1847 bp| Defini...")
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Gene Name

Os10g0434200

Description

TRAF-like domain containing protein

Version

NM_001189241.1 GI:297727612 GeneID:9268933

Length

1847 bp

Definition

Oryza sativa Japonica Group Os10g0434200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:15923418..15925264

Sequence Coding Region

15923418..15923525,15924317..15925264

Expression

GEO Profiles:Os10g0434200

Genome Context

<gbrowseImage1> name=NC_008403:15923418..15925264 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:15923418..15925264 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgacgacgacggcggcggctgcggctctcacgtccagcgtcggtgacggtcctccgccgtcgaggtccaccactaccatcaccgcgggacgaacctaccacatactcaagatcgaggggtactccagcaccttgaaagccggtcgtggccaggccctccgttcctctccgttcagtgcgggaggtcgcacctggtatatcagctactacccaaacggagggcgagaaaccaacaagcactgcatctctttcttcatccatcttgacgatgacacggtcaatgacgatgtcatggcacaagttacattcagcttgctcgaccgacacaggaatccggtgcggtcacacactgtcaccaccacattgtataacttctcggtggctagtagtaacgcgcttgggttcgaaaacttcattagaagggacgacttgcaacgatcggaatatctcaatgacgactgcttcgctatcgcggttcgtctggtcatcaccgaggaatcaccatccttcacggtgcccccatcgaacatgcacatggattatggtgatcttctatcaagcaaagagggaaccgatgtcgagtttgtggttggcggcgagacatttgccgcacacaggttggtgctagcggcacggtcgccggtgttcaaggcggagctattcaaaccaatggaggaaggcaccacggatgtcataaaaattgacaacatggatgcacaagtgtttaaagctctgcttgtttttatctacacggacacttggccagagataggtcaagacgagacgactatggttcaacaactactcgttgcagccaataagtatagcctatcaagactgaagataatgtgcgaagataagttgtgcagctatattgatacaagttcagtggttactatgctgatgctagcagacaagtaccaatgccatggtcttaagaagtcgaacttcctcccttttgtttccaaattccaacctcgcgagcaccagaaaaccctagcaaaaaccctcgtcaccatcgccaagcttccaatggatctgaatacctga</cdnaseq>

Protein Sequence

<aaseq>MTTTTTAAAAALTSSVGDGPPPSRSTTTITAGRTYHILKIEGYS STLKAGRGQALRSSPFSAGGRTWYISYYPNGGRETNKHCISFFIHLDDDTVNDDVMAQ VTFSLLDRHRNPVRSHTVTTTLYNFSVASSNALGFENFIRRDDLQRSEYLNDDCFAIA VRLVITEESPSFTVPPSNMHMDYGDLLSSKEGTDVEFVVGGETFAAHRLVLAARSPVF KAELFKPMEEGTTDVIKIDNMDAQVFKALLVFIYTDTWPEIGQDETTMVQQLLVAANK YSLSRLKIMCEDKLCSYIDTSSVVTMLMLADKYQCHGLKKSNFLPFVSKFQPREHQKT LAKTLVTIAKLPMDLNT</aaseq>

Gene Sequence

<dnaseqindica>1740..1847#1..948#atgacgacgacgacgacggcggcggctgcggctctcacgtccagcgtcggtgacggtcctccgccgtcgaggtccaccactaccatcaccgcgggacgaacctaccacatactcaagatcgaggggtactccagcaccttgaaagccggtcgtggccaggccctccgttcctctccgttcagtgcgggaggtcgcacctggtatatcagctactacccaaacggagggcgagaaaccaacaagcactgcatctctttcttcatccatcttgacgatgacacggtcaatgacgatgtcatggcacaagttacattcagcttgctcgaccgacacaggaatccggtgcggtcacacactgtcaccaccacattgtataacttctcggtggctagtagtaacgcgcttgggttcgaaaacttcattagaagggacgacttgcaacgatcggaatatctcaatgacgactgcttcgctatcgcggttcgtctggtcatcaccgaggaatcaccatccttcacggtgcccccatcgaacatgcacatggattatggtgatcttctatcaagcaaagagggaaccgatgtcgagtttgtggttggcggcgagacatttgccgcacacaggttggtgctagcggcacggtcgccggtgttcaaggcggagctattcaaaccaatggaggaaggcaccacggatgtcataaaaattgacaacatggatgcacaagtgtttaaagctctgcttgtttttatctacacggacacttggccagagataggtcaagacgagacgactatggttcaacaactactcgttgcagccaataagtatagcctatcaagactgaagataatgtgcgaagataagttgtgcagctatattgatacaagttcagtggttactatgctgatgctagcagacaagtaccaatgccatggtcttaagaaggtgtgcttcaatttccttgcctcttcaagagcattgtctttggtcatgaaagcagataatttctggtgtttaatccagagccatccaactatgttgaaggatttaatttacaacatcgttactcatcaattggaaattaaattatcagtgtagtaattaggattcatccaagccaaaattcaactgtcgagaaaaataaaggtttctttcgtggaatgagttcacctacatatggttcagttttgtagcgccttccagcaagcatatttacaaggaaaatcaatttgcaatataaagtactaacagagttataagaaaacgacgtgtatgatactcctctgtcttatattattatacgttttgagtttttttttcaaatttaataaggtgatttatagaaatagatagtaagttttgtcaacggactatacccgacaacggtaattctgtatatcatgaatcttatattggtgatatgtcttatctataacactgataatagttcttaacctcaatgcaaatgattggactaacgttctcgataatgtaacctgaagatatatctttgtcagaattacctagccattctcgaaaaaccgagtaggcacaaaattttctacaaagaacgtaaccatcttttgaatttgtaaggaggtcagaaaaacaacaatcgtataaaattctgcaaatattccacctgtgatttctccctctttcttgaaatacaaaccatcatatatgacatataaaatccacttatgagattcatttgggttccgtttgtacctcagtcgaacttcctcccttttgtttccaaattccaacctcgcgagcaccagaaaaccctagcaaaaaccctcgtcaccatcgccaagcttccaatggatctgaatacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0434200, RefSeq:Os10g0434200