Os02g0674700

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Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0674700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001054252.2 GI:297599740 GeneID:4330296| Length = 403...")
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Gene Name

Os02g0674700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001054252.2 GI:297599740 GeneID:4330296

Length

4035 bp

Definition

Oryza sativa Japonica Group Os02g0674700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28367314..28371348

Sequence Coding Region

28367314..28367490,28368312..28368476,28369196..28369328,28369420..28369539,28370804..28371348

Expression

GEO Profiles:Os02g0674700

Genome Context

<gbrowseImage1> name=NC_008395:28367314..28371348 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28367314..28371348 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgccacgatccccaagcccccgtggcgacgcgcgcctggactcggcaccgctcctcggtggcggcggcggcggtggcggccgtcgccacggtggcgcgctgcggcggccgtcgctccggggagcggctcggttcctgcgccggagcggtcgccgggcgatgcgcgagccgtccctgctggtgcgggaagcggcggcggatcagctggaggagcggcaggccgactgggcctactcccgccccgtggtggcgctcgacctcctgtggaacctcgccttcatcctcgttgccgccgccgtgctcgcgctgagccgcgaagagagcccgtccatgccgctccgcctctggatcgttgggtacgccgttcagtgcgtcctccacatggcctgcgtcgccatcgagtaccgtatgcgccgcggccagagcggtgaatcccccatggccgccgacgaggagacaggaaccgatggatcgtcgtcgtcaagtgacgaggacgccggcgagcgtgctccccgtggccgcaatggcgattatgttcgtattgcaaaacatctggagtctgctaatacaatgttctcctttatatggtggataatcggattttactgggtatctgctggtgggcaagttcttactcatgatgcacctcaactttactggctttgcatcgtctttctggcatttgatgttttctttgtcgtcttttgtgttgctttggcttgcatcattggaattgctgtttgttgctgcctcccatgtatcatagcaattttatatgctgtgtctgatcaggagggagcatcggaagatgatattcgccaaattccaagatacaaatttcggaggatggatgagcctgaaaagcaatctgtcaacatgactggatcttccggtggaataatgatagaatgtggcaccaaccaacctattgaaaaagtacttgcagctgaagatgcggagtgctgcatttgcctgtcagcgtatgatgatggtgcagagctgcgtgagctcccttgtgggcaccatttccactgtgtctgcattgataaatggctgcacatcaatgcgacttgtcccctatgcaagttcaatgttcgaaaaaacagtagcagcagtggtagtgaagaagtataa</cdnaseq>

Protein Sequence

<aaseq>MATPRSPSPRGDARLDSAPLLGGGGGGGGRRHGGALRRPSLRGA ARFLRRSGRRAMREPSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAFILVAAAV LALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEETGTDGS SSSSDEDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAP QLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQ IPRYKFRRMDEPEKQSVNMTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGA ELRELPCGHHFHCVCIDKWLHINATCPLCKFNVRKNSSSSGSEEV</aaseq>

Gene Sequence

<dnaseqindica>3859..4035#2873..3037#2021..2153#1810..1929#1..545#atggcgacgccacgatccccaagcccccgtggcgacgcgcgcctggactcggcaccgctcctcggtggcggcggcggcggtggcggccgtcgccacggtggcgcgctgcggcggccgtcgctccggggagcggctcggttcctgcgccggagcggtcgccgggcgatgcgcgagccgtccctgctggtgcgggaagcggcggcggatcagctggaggagcggcaggccgactgggcctactcccgccccgtggtggcgctcgacctcctgtggaacctcgccttcatcctcgttgccgccgccgtgctcgcgctgagccgcgaagagagcccgtccatgccgctccgcctctggatcgttgggtacgccgttcagtgcgtcctccacatggcctgcgtcgccatcgagtaccgtatgcgccgcggccagagcggtgaatcccccatggccgccgacgaggagacaggaaccgatggatcgtcgtcgtcaagtgacgaggacgccggcgagcgtgctccccgtggccgcaatggcgattatgttcggtaatgtaaaggactgattagagggattgttgctattaccgatcctttaattgttctaaactttagctttgttctagttgaagtaactttcagtctttcactgttaagttcaaggctatcgttcctttcatggtaaactagaaattgtggtcacactacaggtatcctagtaattttgtaccaaatttcaagactaatcctttaactatgttcataatgtatgctagaaatgttggtcgtgtccttgtgggtcttaatttttgcctaattggaacaaggagaaccatatgagagttcccaaccaaggttgaattaactcttggcttgatatgtgaacaaagatagttgaatacatgaaatggacctatagttgaagttctaagtggatgtttttagcttgatttccataacctgaaagcctgtaacaaaatatctgctcatatatttactggacatgcataattttctcacctgtgtttcttatgttgctatatcgtgacaaccttattatttctgcatgatcgcttactttttaaagctctcagtagctttagtcctatagaataaacaagaatgactaccaaatttgattttaattatatgaatatttaaaactaactttgtttgttccttgggttttcagttaagtcttggtgatcttgaacaagtacctttgtctgtgaatccactaagatatattttgttgcatttgttcctattttgccagaagttattgttgtccactttatcttagttcgtcatccacctagttgcttctagtaatgcaagttacatgaatcatactggtttttctatgttagtgccaatatgagttgtctgcagaatgtcaattcttaagatggacttcaagcatgttgtggctttaacagacataatatagcatgcatctatgctatgctggatgctggaggttttgattgtcagttagagaggagaggcacactaatgtggtcactctgctgtgtatctctgaatatagcataactttctcatatttctatgctgaaatgcgactgtgcttttctaccttctataagcctttatctcatttttatttaccacaccttcctagttttattttagaaatttttatttctatgggaaatcagagctattataattagtttagtgtatttaatggaaatagtttccatttaatttatttttcatggtttgcttttagttcagttggccaccatatcttctatcctgataatttttctgttcataaatctgcttgcagtattgcaaaacatctggagtctgctaatacaatgttctcctttatatggtggataatcggattttactgggtatctgctggtgggcaagttcttactcatgatgcacctcaactttactggtaatataatttctaagatatgcctgaagtttttgacatgtctcatcattttatttgtttttcattatatctgtttacacttcatctgcaggctttgcatcgtctttctggcatttgatgttttctttgtcgtcttttgtgttgctttggcttgcatcattggaattgctgtttgttgctgcctcccatgtatcatagcaattttatatgctgtgtctgatcaggtatggtttattgaatgccttatgcctacagtagagaatgtcattaatgttacagctagtaacttattttcgtaattatgctaagtctacccttcttgtgccgttgattctcttcttgcttcaaattggtcaccgtatagggctgtaactattctcaaaatcaactggttaggccttggccatattagtaggaacatatgtccatggaatgcaattatttttatggcctcgttcaagaggaccccgatccaggtccatcccctgatgaaattgaaagaccacacggtttttctaaataaatggggtgatattggctagctactgttaaaactgtttcagttgacgttaagctgttaaaagtcggatatcgctaggaaactgagaaagttcagtattggaatatttctcttgtgttctctaatcattttgcaaaattttaaatttaaattcatcaatttcttttgctgttcaaacttcaaactgtcccagctgaccctagttggacttatggacacatcccgatactcatcattctgggtttatattaatattgtttaattgtatgctggtagtaagacttcccagcttcctttccttagaataatttatgtgtgcagtatatatgaataatctgcttgaacatcgcatatctcatggattacatcgctttggagatgagtatacacatgataatgtttttaccatctggttgataccaggagggagcatcggaagatgatattcgccaaattccaagatacaaatttcggaggatggatgagcctgaaaagcaatctgtcaacatgactggatcttccggtggaataatgatagaatgtggcaccaaccaacctattgaaaaagtacttgcagctgaagatgcggtaagttgttcacttttctttttcttatatcaacaatttctgagtgtactttattgactgtttaatcaagtctgattcatcctgatttgatcaatttctacaaaattaggcatctaactgtgtttgactgtttggcacagttggcacatcacagtttgtcatactagttgcagcatgcttagcaaaccatcaaagtttcccactagcaaagttccaaaaccactactagttatactggggaagaagtaggtgattgaactcatttgtaacacaaaattgacctgagaagggaaaaagtggctcataatttcccggtgaaaaaaagtggctcgtatccagtcccattactggggtaaatgcaatatttgaaatttccgtactagaatatgaggaattgccagtattcaggaggcaatgcaaaccctatgctgtagagtcatgagccactttttaattgtaaactcacttagttgtttcttattaagggaaatttagagcttaagttggaaagaataaactcatgagtttgagcttacaattgcccaactctgtacatttggaccttcagaccaaatacatctgtagcctttgtattggttatttagcaaataaaagaggtggtttaactacctcatttttttggcctcaaagtttcttcatactgatattgtttctctaagtgatttcttggattgttgcatcatggaacatttttcttgttcacccgttatggttataatctaagtctcttagtcctgttgcacccagccatcccttatattttatgataaatgacttcaccatccaattgatcggtgcaggagtgctgcatttgcctgtcagcgtatgatgatggtgcagagctgcgtgagctcccttgtgggcaccatttccactgtgtctgcattgataaatggctgcacatcaatgcgacttgtcccctatgcaagttcaatgttcgaaaaaacagtagcagcagtggtagtgaagaagtataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0674700, RefSeq:Os02g0674700