Os02g0678400

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Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0678400| Description = contains InterPro domain(s): IPR005913, IPR001509| Version = NM_001186185.1 GI:297721502 GeneID:9267465| Length = 37...")
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Gene Name

Os02g0678400

Description

contains InterPro domain(s): IPR005913, IPR001509

Version

NM_001186185.1 GI:297721502 GeneID:9267465

Length

3757 bp

Definition

Oryza sativa Japonica Group Os02g0678400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28596246..28600002

Sequence Coding Region

28596359..28596841,28599153..28599605

Expression

GEO Profiles:Os02g0678400

Genome Context

<gbrowseImage1> name=NC_008395:28596246..28600002 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28596246..28600002 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgtcgccaccaacggctcctcctcctccacctcggagtcggcggagaccgcgcagtcgcaggcgtacaagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgccgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcgagaccgacatcgacgaggtcgcgcccacccacgtgttcaatgccgcgggggtcaccggccgccccaacgtcgactggtgcgagacccaccgcaccgagaccatccgcgccaacgtctgcggcacgcttacgctcgccgacgtctgccgcgcccgcggcctcgtgctcatcaactacgccacgggctgcatcttcgagtacgacgccggccaccagctcggcacagggatcgggttcaaggaggaggacacgcccaacttcgtcggatcattctactccaaaaccaaggccatggttgaggaactgctaaaaaactacgagaatgtatgtacacttcgtgtaaggatgcctatttcatccgatctatccaatcctcgcaacttcatcactaaaatcgcccggtatgataaagtggttgatataccaaattcaatgacaatattggatgagcttcttcctatctcaatcgaaatggcaaagagaaacctcactgggatctggaatttcactaatcctggcgtggtgagccacaatgaaatattggaaatgtatagggattacattgatccgaatttttcttggaagaactttaccctggaggagcaagccaaggtcatagttgcaccgagaagcaataatgagcttgattgtaccaagctgaaggcggaatttccagaacttttgtcaatcaaggattctctggtaaggtatgttttcaagccaaatcagaagacgtccaaggcttga</cdnaseq>

Protein Sequence

<aaseq>MGVATNGSSSSTSESAETAQSQAYKFLIYGRTGWIGGLLGQLCA ARGIPFAYGAGRLENRAQLETDIDEVAPTHVFNAAGVTGRPNVDWCETHRTETIRANV CGTLTLADVCRARGLVLINYATGCIFEYDAGHQLGTGIGFKEEDTPNFVGSFYSKTKA MVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIARYDKVVDIPNSMTILDELLPIS IEMAKRNLTGIWNFTNPGVVSHNEILEMYRDYIDPNFSWKNFTLEEQAKVIVAPRSNN ELDCTKLKAEFPELLSIKDSLVRYVFKPNQKTSKA</aaseq>

Gene Sequence

<dnaseqindica>114..596#2908..3360#tcctccctcccagacaggctccattttccactctcccctcctggcctcccacctcccatccggatctcgccgcgccgcgccgcgccacccttttccgcgccgcgtcgtcgggcatgggcgtcgccaccaacggctcctcctcctccacctcggagtcggcggagaccgcgcagtcgcaggcgtacaagttcctcatctacggccggaccgggtggatcgggggcctgctcggccagctctgcgccgcgcggggcatccccttcgcctacggcgccgggcgcctcgagaaccgcgcccagctcgagaccgacatcgacgaggtcgcgcccacccacgtgttcaatgccgcgggggtcaccggccgccccaacgtcgactggtgcgagacccaccgcaccgagaccatccgcgccaacgtctgcggcacgcttacgctcgccgacgtctgccgcgcccgcggcctcgtgctcatcaactacgccacgggctgcatcttcgagtacgacgccggccaccagctcggcacagggatcgggttcaaggaggaggacacgcccaacttcgtcggatcattctactccaaaaccaaggccatggtatgacacctatcttttctttcttttttttaagagaagggtttcttttacctggccactacatccaaccggatatatacggccatatattttcttatccacaatgaatggactatgtgcacatctgagcaagctaaccggccggctccattttgcttagtttacgatgacgatgtgtaattgcacgttggaaagttggaactatggttttgtgtgatcatggagtgaaaggtgacactttggttgaggccttgagggacgtatgattagttagtttcatgccagtactagtattgattagttctcgtttgattagatctggcgtggtctgtacaggaagcggatcccctgactgtgattagcaaagtcacaggcgtgcagttctgctcaatccaccatccattctcatcagacggtgcacaccacttgttttctcaattcctttcttctgctcaatccaccatccattctcaccccttcagagtctgcaccttcaaggccggtcgccatgtccgtcactcctaaccagatcgcaatttcagctgctggaaagctgtaggctattttagtcagattgtcgttgtaacaattaaaatggtgataggtggttgctagatccggtaaaagcttctccctttgcatgacctctacccaaagcactgaatgtgaacatcaccttctgcaatacgagcattttcttccaactaatggactctcactggtactcaaccataatcaaatgttccggccatctcttcgtcgagatgaatcatctctgtgcacacggctgcacctctggattcggatgccaagaaggtagataccgggatgaggtgcgaggccggaagatttgccaacggttagtccatttctgtgttttgtatcgccgattacaagatggaaggagtttttgagccgatgatggcagccgcggcgggccaagaaactaccgagtgaagcgagcaaggagaagaaaggaattggggcaacgagtgtgcaccgtcagatgagaacggatagtggataggatggaactgcatgcccatgactttgcatggcggtctgtacaatatccccaatatcttggtcagcgtgctgatgcagatccttatggttgacaatgttgacagcttgggttgacttactcctagttgtaatgatggcagactattgagtaaagcttgcaggaacatgtttccttctgccttctggaatcaaaacacagtattcattttggtctgtcgagcattctgatctgttattggtccatgcacatttgcacactagttctaagttttaaacttttcatagtatcatgctttgattttgtgtaacattctccatgatcttggccaattttaataaataaagggtagcaagtttccttgaatcaaatagctaagattgacactagaaatcctgtcaacatcttgaagttctgggagtgttaactttatgctagctataggcttagcctttactttgacagaaagttgtgctatttgaatctggagtttctataggtttagctaattaacgacttaaaatgtgctaccatatactttactagaattgtatatgttttacccttcatgtatgtgattgctgccaaggttacagaggcatttcatcttgttttaggattgtttccttgctggcattatcagatcattgtttcttggagtgcatgcattagttttaaagaaataaactcctgacatgcattgtaagtatagtgtgaccaaaactattgtgttctgacacttggtaggttttctgctggatgttctgggtagaaaaaaaataaatcattaacttctgtaggttgaaaacataccgatatgaaatgaatatgctgaatatgtagcgcaattggatgaaattttgtaatactagagaaaagaatactttgcgagttccaattaagtgtcaagtttattgttcatagccacattatttgttttccacaatttgtttcgaagtttcaacctataggtggttgagttagatgagaagcaccaaatatgcgtttactttcacaagtatgttttttgagttattttgaatcccctatatgccatgatcttgaatctttgcaaacagttgtttatttatcgaacaaaatggtgtctagtctcacagagagagatcctctcactagcagaatcacttgtctgaatttggttagagtagtttgttgtgttaccatgctatcttgttgtcctgtatgttcatgatagtttctatttttaaatcagattatttttcctgacttgtatttcacagttaatcttagcattgtttttaacaggttgaggaactgctaaaaaactacgagaatgtatgtacacttcgtgtaaggatgcctatttcatccgatctatccaatcctcgcaacttcatcactaaaatcgcccggtatgataaagtggttgatataccaaattcaatgacaatattggatgagcttcttcctatctcaatcgaaatggcaaagagaaacctcactgggatctggaatttcactaatcctggcgtggtgagccacaatgaaatattggaaatgtatagggattacattgatccgaatttttcttggaagaactttaccctggaggagcaagccaaggtcatagttgcaccgagaagcaataatgagcttgattgtaccaagctgaaggcggaatttccagaacttttgtcaatcaaggattctctggtaaggtatgttttcaagccaaatcagaagacgtccaaggcttgacaaatggaacggtctgcacacaatgttgttgttatttattccatataaattgacatttctctccctggtgacaatcaataagcatgcatgatgactctttccctgtgtgtgcattgtttttgaagcagataggtttctcataggaagtcataccccgtcccgtcatattgattacatagaacaaggcaaggtgccatatagttcaacttttgtatgtcttctggatcgtatgaataccgtgggaaatgggtaagggtggagattcctctgtttgtatcttacaattggaatacagtcagttgcactgcgtgttgttcaataggaaatggctttggactttccttcatgtaacatgtaatgtaatacattgaattctcagctaatatattgatatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0678400, RefSeq:Os02g0678400