Os02g0679500

From RiceWiki
Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0679500| Description = Similar to Rac GTPase activating protein 1| Version = NM_001054272.1 GI:115447914 GeneID:4330316| Length = 3237 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0679500

Description

Similar to Rac GTPase activating protein 1

Version

NM_001054272.1 GI:115447914 GeneID:4330316

Length

3237 bp

Definition

Oryza sativa Japonica Group Os02g0679500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28630877..28634113

Sequence Coding Region

28630878..28631213,28631335..28631438,28632308..28632428,28632536..28632655,28633001..28633231
,28633332..28633871

Expression

GEO Profiles:Os02g0679500

Genome Context

<gbrowseImage1> name=NC_008395:28630877..28634113 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28630877..28634113 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttctctcccaccaccgagaccgccgcctattctttccttcctccctctctccggtctttgcttctcgcgaggaagttggcatcctagatacatactccttccatggcgccgtcccagatccgcttcggccaccagatccccttctcccgccccgactccgacgaggaggaagaggaggacgacgaggacgaggaggtggaggaggaggaggaggaggaggaggaagaggagtacgaaggggaggaggaggagatggagggcgaggtgccggtgtcatcgccgctgatgctgccggcggcgaggggaggaggaggaggaggggtgtccgtcgtggagacgtgcggcacgtctcgcacgtcaccttcgaccgcttcgtggggttcctcggcctccccgccgacctcgagcccgacgtgccccgccccgcgcctagcgccagtgtgagtgtatttggagtttcaccaacgtccatgcaatgctcatacgataacagaggaaacagtgtgccaacaatactattgaccatgcaaaagaagttatatcaacttggggggcttcaggctgaaggaatcttcagaataaatgcagacaatagtcaggaactacatgtcagggagcaactaaacatgggtgttgttccggatggtgttgacatgcactgtctgacgggcctcataaaggcatggtttcgtgaacttccaagtggagtattggactcattgactccagaacaagtgatgcactgcaacactgaagaagaatgcgctctccttgcgagtactctacctccagtggaagcagcactacttgattgggccatcaatctgatggcagatgttgtggaacatgaaaactacaataagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcagatggccgatcccttgactgctttgatacatgcagttcaagtgatgaattttctcaagacacttatcttgaagactgtgaagggacgggaagaaacagctatgccatcaagtgcattcccatcaagctctggttccccaagtgacaaagatgaacctcaggcattagagcatttggacaagcccaccatttgttcaactcagcaaaataatgattttccaatgattagtggggctactcttgatcacttcctctttagagcagaaccattgcgtcataatgacgcacaaggtagtgctggacgacccaagaaacgcgacaataaggaccatgacaacagcagcagggaattttctcccatagatagtgattcaagtagccaagccagcaattctgcaagcaaattcagtaatgacaatgtggaaggtttatttgacagatttaaatttcggaaaggagtagggaggctgtgcagacaccctgtttttcagttgagtaggtccatgaaaaaatcaggtgaagcgggacaagcctgtgtatga</cdnaseq>

Protein Sequence

<aaseq>LLSHHRDRRLFFPSSLSPVFASREEVGILDTYSFHGAVPDPLRP PDPLLPPRLRRGGRGGRRGRGGGGGGGGGGGRGVRRGGGGDGGRGAGVIAADAAGGEG RRRRRGVRRGDVRHVSHVTFDRFVGFLGLPADLEPDVPRPAPSASVSVFGVSPTSMQC SYDNRGNSVPTILLTMQKKLYQLGGLQAEGIFRINADNSQELHVREQLNMGVVPDGVD MHCLTGLIKAWFRELPSGVLDSLTPEQVMHCNTEEECALLASTLPPVEAALLDWAINL MADVVEHENYNKMNARNIAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKTVKGRE ETAMPSSAFPSSSGSPSDKDEPQALEHLDKPTICSTQQNNDFPMISGATLDHFLFRAE PLRHNDAQGSAGRPKKRDNKDHDNSSREFSPIDSDSSSQASNSASKFSNDNVEGLFDR FKFRKGVGRLCRHPVFQLSRSMKKSGEAGQACV</aaseq>

Gene Sequence

<dnaseqindica>2..337#459..562#1432..1552#1660..1779#2125..2355#2456..2995#acttctctcccaccaccgagaccgccgcctattctttccttcctccctctctccggtctttgcttctcgcgaggaagttggcatcctagatacatactccttccatggcgccgtcccagatccgcttcggccaccagatccccttctcccgccccgactccgacgaggaggaagaggaggacgacgaggacgaggaggtggaggaggaggaggaggaggaggaggaagaggagtacgaaggggaggaggaggagatggagggcgaggtgccggtgtcatcgccgctgatgctgccggcggcgaggggaggaggaggaggaggggtgtccgtcgtggagacggtggcggcggcgctgcggaggtcgctgctgctgtgcagcagcgtgcgcgccgcggaggacgaaggggccgcggcggcggcggcggctgctgcggggatgcagattggccggcccaccgacgtgcggcacgtctcgcacgtcaccttcgaccgcttcgtggggttcctcggcctccccgccgacctcgagcccgacgtgccccgccccgcgcctagcgccaggtcagtgccgcgccattgccttgcttcgccttctccatgctccgtggatttgaggcgggggctctggaattggagttccgctccggagatcagcatctgcggtgctactacctgtgtggattaagcccattttcaccctgcactgctgttcgtttccgaattaagttcatggcatgatgctaaatatagtgccacattgccgcgtaactaagcaaaagtgcacacagaatagttgcctcgccgagcccttattaccgattcggaattggttacccacgagcgacgagccaataggactgttacgtttgcaaactcttacaggaagccagaactgttgccatttccaaggatggcactgccaagttcgactactggggaatcttgtaaagcacattccttttgtggagatgactctctttgtccttgtcaggcattgggatgttgtgatatattcctcagtcccaaaatataagcacttttagcatttgaaatttatgccaaaatataattaattttagcactatttagaatactgcttgtcccatctatcactgttttaattttactatcttactctcaaccatccgttggggcaccaaagtcttttttccgaacaggcaagggcgctccatatgtttcatcttttgtagttagttgttaccccttactgattcctatcctggtattgttgtatgtatgatacataacctttcagttgtagaggggaactaaggatcatttctgtttcttaagttcaattgttataagttcttttccttaaaagaactttgcagcctacctttattagtgaatttctagcaaagctcagaccctaacttagtttatgtttaatctatttccttacacagtgtgagtgtatttggagtttcaccaacgtccatgcaatgctcatacgataacagaggaaacagtgtgccaacaatactattgaccatgcaaaagaagttatatcaacttggggggcttcaggtaaggccaaatggccaacaaattttggaaccttaataatactagcatttacactactcagcaaaaaatggaaaaaagttctgaaattctgcttcttgttttcccaggctgaaggaatcttcagaataaatgcagacaatagtcaggaactacatgtcagggagcaactaaacatgggtgttgttccggatggtgttgacatgcactgtctgacgggcctcataaaggtgtggtgacaattatttcttgtgcttttaattaacctttgatttatttaccatatgttttaaatgcataaaacccaaccttatggaaatctttctctatggaaattgaacatgtacaaagccttcaaatatgataatgcagacattgtttatgcagtacagagatttagatataagatttcagacagtaatcaatagatagactagactctagagtatctagcgcatacatagactaaattatatttttaagaagtctacagaaaaatgagtttttgtattgttactttttatctgtttgttctcttctacaccattccatgaccggtgtgatgctgatggtaggcatggtttcgtgaacttccaagtggagtattggactcattgactccagaacaagtgatgcactgcaacactgaagaagaatgcgctctccttgcgagtactctacctccagtggaagcagcactacttgattgggccatcaatctgatggcagatgttgtggaacatgaaaactacaataagatgaacgctcgcaacattgctatggtttttgcaccaaacatgactcaggttattctcaaaatctatttggctttatttattttttcttgctatctacagaatttgctatttcacagactaatcatgtaacataccatctcttttatagatggccgatcccttgactgctttgatacatgcagttcaagtgatgaattttctcaagacacttatcttgaagactgtgaagggacgggaagaaacagctatgccatcaagtgcattcccatcaagctctggttccccaagtgacaaagatgaacctcaggcattagagcatttggacaagcccaccatttgttcaactcagcaaaataatgattttccaatgattagtggggctactcttgatcacttcctctttagagcagaaccattgcgtcataatgacgcacaaggtagtgctggacgacccaagaaacgcgacaataaggaccatgacaacagcagcagggaattttctcccatagatagtgattcaagtagccaagccagcaattctgcaagcaaattcagtaatgacaatgtggaaggtttatttgacagatttaaatttcggaaaggagtagggaggctgtgcagacaccctgtttttcagttgagtaggtccatgaaaaaatcaggtgaagcgggacaagcctgtgtatgaagtaatgacacgatagggtgtagttgatagtttccattatttttagaggcatgtttacttaacatttcatcaaccattgtcctagatttcgtgagtagaactgtagaaggtattagccaatttggtggtagtagtactgaactactgatgtcgagttcctgcctgtatatttcaactattcatttctgaccaatcaacttgtacgatgccatcattactttcggttgttagttatacttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0679500, RefSeq:Os02g0679500