Os10g0436500

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0436500| Description = Putative gypsy type transposon domain containing protein| Version = NM_001189243.1 GI:297727616 GeneID:9271220| Leng...")
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Gene Name

Os10g0436500

Description

Putative gypsy type transposon domain containing protein

Version

NM_001189243.1 GI:297727616 GeneID:9271220

Length

2666 bp

Definition

Oryza sativa Japonica Group Os10g0436500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16033440..16036105

Sequence Coding Region

16033440..16033856,16034088..16034277,16034352..16034782,16034888..16035247,16035329..16035483
,16035661..16036105

Expression

GEO Profiles:Os10g0436500

Genome Context

<gbrowseImage1> name=NC_008403:16033440..16036105 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16033440..16036105 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctcgcaagcctacaaaggctggatcgactggcgaagaccctagcagccttggcgaagggtggtcgtgcttccttggcaaatcacttgtcaaggaggccgccttgggcgagcttgtcctttctggcgttctcgtggagggccaggcgacctgcgggggcgaagccatcgtcccttcgcccggtgacaaccagactgttgtcttcgccgccttcttcgctaccggacttcgcctcccttgcaatgactttctgctgtccgtgttgaaaatgtatgaggtcaagctttaccagctcaacccatcagcgttcccgaagttagctgtttttgcatggatgtgccaaacgtgtgggttcgatcccactgccgagcttttcgccgttctgtttatggcatgcgcgacgacgaaggacgtcgacggtgttcttgagtcttggcttatcctccttcgcaaggtcgcgcggcggctaagtacccgtgacctctgcgaggagttttgcctgcttcggatttctccccttgctcgcgaatcgggggtgttggttagtaaggacgaaaaggtgctcggacttccccgcctcgcttttcctccgggagtccaccttcgcacacatggagacgctgaaaccgaggcgtcgaagatggttgggggccttacttcagccgagtttgcccgcctgctttcgcgtcagcttgacggctgggcgaaccgagttcactttggcgaactacccggtcgattgatccccaccaaagctattgacgacgtcggaacgtcgagaaagcgtaaacgggcggtcgcgaagggcgggcaagtgcgatctcgtcgcgccacgaaggacacagctgaaagtggtgaagaggaggaggaagacgacggggaggccgagtctgaggacgatggctcccgtggctatacccctagtccgcccccggtgaaatctggggcgggctctcgcgtttcacccgttcacccgcaagacgttgctatgacgaacactcttctggcgatctctagcactgcggcgaagccgcgcggtcctcgtggggggtgcgcatctcctccgccttctagcaacgccgaagcggcgacaggtgggagtgcttcggcgccagcaatcggggcgaacaaccctcacaacgaacgggttgaggtggttccttcgccagctcgccggcgggaaggaaaagctccgacggtcgaagcgattgtgtcagacgtgacacttactgccccgcacttcgttcccgccgatttcgccactcggccagagatcaccccttttgtggatggggtgtgccaagttatcgcgcccacggaaggccttggtctcttcaccgagatgaacgagttcggcgagagctatgccgccgtggtgagcttgtttgttcggggccttgccgcgcatctgagtgcgaagaagtctgccctggaaaggctggatggttaccggcttcggttgcggaaggccaaggacgaccttcgccacaaggaggacgaaaggcgcgtcgtggcggacaccttgtggagggcgaatgcggagaacaggctggccctgaatgaccttggtgctcgcgcggaggacaccctgggagatgatgggacggctttcgacttttccgagtggacgcaagagtcggccggctcagttgtcgaagtggccggcgcttatggggattgttgtgctcgtgtttcggcgggcttcgtccttagcctgctacatacgcacggttgcgagcatatcagggattttccccgctatgtgacggaagaatggcctttgaactcgcaatgctctggggcggccttaaaggcgttccgaaagggtttctgggaggacggtggccgggattgcgcgaagaccagccttcgcgagaatcttgagaggatcgcgaaggaggaggaagctgctgccgtccatgccggaggagaccctgggtccacggagctagcaggcgaagacaatagaggccaagaccaccctaaggtgtga</cdnaseq>

Protein Sequence

<aaseq>MAPRKPTKAGSTGEDPSSLGEGWSCFLGKSLVKEAALGELVLSG VLVEGQATCGGEAIVPSPGDNQTVVFAAFFATGLRLPCNDFLLSVLKMYEVKLYQLNP SAFPKLAVFAWMCQTCGFDPTAELFAVLFMACATTKDVDGVLESWLILLRKVARRLST RDLCEEFCLLRISPLARESGVLVSKDEKVLGLPRLAFPPGVHLRTHGDAETEASKMVG GLTSAEFARLLSRQLDGWANRVHFGELPGRLIPTKAIDDVGTSRKRKRAVAKGGQVRS RRATKDTAESGEEEEEDDGEAESEDDGSRGYTPSPPPVKSGAGSRVSPVHPQDVAMTN TLLAISSTAAKPRGPRGGCASPPPSSNAEAATGGSASAPAIGANNPHNERVEVVPSPA RRREGKAPTVEAIVSDVTLTAPHFVPADFATRPEITPFVDGVCQVIAPTEGLGLFTEM NEFGESYAAVVSLFVRGLAAHLSAKKSALERLDGYRLRLRKAKDDLRHKEDERRVVAD TLWRANAENRLALNDLGARAEDTLGDDGTAFDFSEWTQESAGSVVEVAGAYGDCCARV SAGFVLSLLHTHGCEHIRDFPRYVTEEWPLNSQCSGAALKAFRKGFWEDGGRDCAKTS LRENLERIAKEEEAAAVHAGGDPGSTELAGEDNRGQDHPKV</aaseq>

Gene Sequence

<dnaseqindica>1..417#649..838#913..1343#1449..1808#1890..2044#2222..2666#atggctcctcgcaagcctacaaaggctggatcgactggcgaagaccctagcagccttggcgaagggtggtcgtgcttccttggcaaatcacttgtcaaggaggccgccttgggcgagcttgtcctttctggcgttctcgtggagggccaggcgacctgcgggggcgaagccatcgtcccttcgcccggtgacaaccagactgttgtcttcgccgccttcttcgctaccggacttcgcctcccttgcaatgactttctgctgtccgtgttgaaaatgtatgaggtcaagctttaccagctcaacccatcagcgttcccgaagttagctgtttttgcatggatgtgccaaacgtgtgggttcgatcccactgccgagcttttcgccgttctgtttatggcatgcgcgacgacgaaggacgtgagcacatcggccggtccaaagaggacgatgtttgggtgcgtgaatttcatactccgccctgagcgctcggacgcctagccggtgcctgcctcgatggcgaaatgggagcgaaattggatgcaaaagtggctttacatcaataacccatattccgccgaagatagcagggcgaactggcttaggttcgaacgcgctgctgtttcgatcgctgctaagccgaacgtgtaggtcgacggtgttcttgagtcttggcttatcctccttcgcaaggtcgcgcggcggctaagtacccgtgacctctgcgaggagttttgcctgcttcggatttctccccttgctcgcgaatcgggggtgttggttagtaaggacgaaaaggtgctcggacttccccgcctcgcttttcctccgggagtccaccgtaagttccttgtgtttatcagcgtcctttgtatgtatgtggacatctttcgactcattccgctttttttttagttcgcacacatggagacgctgaaaccgaggcgtcgaagatggttgggggccttacttcagccgagtttgcccgcctgctttcgcgtcagcttgacggctgggcgaaccgagttcactttggcgaactacccggtcgattgatccccaccaaagctattgacgacgtcggaacgtcgagaaagcgtaaacgggcggtcgcgaagggcgggcaagtgcgatctcgtcgcgccacgaaggacacagctgaaagtggtgaagaggaggaggaagacgacggggaggccgagtctgaggacgatggctcccgtggctatacccctagtccgcccccggtgaaatctggggcgggctctcgcgtttcacccgttcacccgcaagacgttgctatgacgaacactcttctggcgatctctagcactgcggcgaagccggtatcagtcgctagagggaagaagaaggggaaggtcgtctagattggtcgtgccttttcggacagcgaggggtccgacgggacaccgacttcgccagttctccagcgcggtcctcgtggggggtgcgcatctcctccgccttctagcaacgccgaagcggcgacaggtgggagtgcttcggcgccagcaatcggggcgaacaaccctcacaacgaacgggttgaggtggttccttcgccagctcgccggcgggaaggaaaagctccgacggtcgaagcgattgtgtcagacgtgacacttactgccccgcacttcgttcccgccgatttcgccactcggccagagatcaccccttttgtggatggggtgtgccaagttatcgcgcccacggaaggccttggtctcttcaccgagatgaacgagttcggcgagagctatgccgccgtggtgagcttgtttgttcgggtatgcttttttttttctttgcgcgaaattttcccttttctcttatatcatggcataattgttccggactcccctttccagggccttgccgcgcatctgagtgcgaagaagtctgccctggaaaggctggatggttaccggcttcggttgcggaaggccaaggacgaccttcgccacaaggaggacgaaaggcgcgtcgtggcggacaccttgtggagggcgaatgcggagaacaggtccctccgtgccgatctggaagtgtcgaacaggcggggcacctagcatgatcgccagcttgctgcggccgaagagaggatcaagtctcttgagacccgcctcgtttcgtccgaagccgctgcttcgactttagggctggcgacagaatccgccaaggaggcctgttacacgctcaggctggccctgaatgaccttggtgctcgcgcggaggacaccctgggagatgatgggacggctttcgacttttccgagtggacgcaagagtcggccggctcagttgtcgaagtggccggcgcttatggggattgttgtgctcgtgtttcggcgggcttcgtccttagcctgctacatacgcacggttgcgagcatatcagggattttccccgctatgtgacggaagaatggcctttgaactcgcaatgctctggggcggccttaaaggcgttccgaaagggtttctgggaggacggtggccgggattgcgcgaagaccagccttcgcgagaatcttgagaggatcgcgaaggaggaggaagctgctgccgtccatgccggaggagaccctgggtccacggagctagcaggcgaagacaatagaggccaagaccaccctaaggtgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0436500, RefSeq:Os10g0436500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os10g0436500&oldid=2344"