Os02g0682500

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Revision as of 02:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0682500| Description = Similar to TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein)| Version = NM_001054286.1 GI:115447942 GeneID:4330331| ...")
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Gene Name

Os02g0682500

Description

Similar to TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein)

Version

NM_001054286.1 GI:115447942 GeneID:4330331

Length

2874 bp

Definition

Oryza sativa Japonica Group Os02g0682500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28793373..28796246

Sequence Coding Region

28794987..28796054

Expression

GEO Profiles:Os02g0682500

Genome Context

<gbrowseImage1> name=NC_008395:28793373..28796246 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28793373..28796246 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcccaagccgccgtcggtagccgcctcggcggcggaggcgcagaacccgaacgccttcacctgcgagctgccgcactccatctacgcgctggccttctccccctccgcgcccgtcctcgccgccggcagcttcctcgaggacctccacaaccgcgtctccctcctctccttcgaccccgtccaccccaccgccgcctccttccgcgccctccccgcgctctccttcgaccacccctacccgcccaccaagctccagttccacccgcgcgccgcctccgcgccccacctcctcgcctcctcctccgacgcgctgcggctctggcttgccccgctcgacgatctcgccgccaccgccaccgccgccgcgcccgagctccgctccgtcctcgacaaccgcaagacatccgcctccgagttctgcgcccccctcacctccttcgactggaacgaggccgagccccgccgcatcgggaccgcctccatcgacaccacctgcaccatctgggacatcgagcgcggcgtcgtcgagacgcagctcatcgcgcacgacaaggccgtgcacgacatcgcctggggggagaacggcatcttcgcctccgtctcagccgacggctccgtccgcgtcttcgacctccgggacaaggagcattccaccatcttctacgagagcccccgcccggacacgccgctcctcaggctggcatggaaccgctatgacttccactacatggccaccctgctcatggacagcagcgccgtcgtcgtgctcgacatgcgcgcgcccggggtgccggtggccgaactacacagacaccgggcgtgcgccaacgcggtcgcttgggcgccacaggccacgaggcacctttgctcggctggggacgacggccaagcgctgatttgggagctgccagcgacgcccggcgcagtgccggccgaggggattgatcctgtgatggtgtatgatgccggtgcagagataaaccaactgcaatgggcggcagcttacccggagtggatatcgattgcctttgagaacaaggtccagcttctcagggtctga</cdnaseq>

Protein Sequence

<aaseq>MEQPKPPSVAASAAEAQNPNAFTCELPHSIYALAFSPSAPVLAA GSFLEDLHNRVSLLSFDPVHPTAASFRALPALSFDHPYPPTKLQFHPRAASAPHLLAS SSDALRLWLAPLDDLAATATAAAPELRSVLDNRKTSASEFCAPLTSFDWNEAEPRRIG TASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENGIFASVSADGSVRVFDLRDKE HSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRAPGVPVAELHRHRA CANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGIDPVMVYDAGAEINQLQW AAAYPEWISIAFENKVQLLRV</aaseq>

Gene Sequence

<dnaseqindica>193..1260#ggttgccgtggcacgcgcgcgttgacgcgcctcctccttcgccgtccctcctacctgctcggcctggctgctcgcgttttttactctgaactccccgacccgatcaaccaccgcggcgcgtgagtccattcatccccaaatccacccgagaaagaaaggaagcaaagcgaagcgaatccaacgatttttcccatggagcagcccaagccgccgtcggtagccgcctcggcggcggaggcgcagaacccgaacgccttcacctgcgagctgccgcactccatctacgcgctggccttctccccctccgcgcccgtcctcgccgccggcagcttcctcgaggacctccacaaccgcgtctccctcctctccttcgaccccgtccaccccaccgccgcctccttccgcgccctccccgcgctctccttcgaccacccctacccgcccaccaagctccagttccacccgcgcgccgcctccgcgccccacctcctcgcctcctcctccgacgcgctgcggctctggcttgccccgctcgacgatctcgccgccaccgccaccgccgccgcgcccgagctccgctccgtcctcgacaaccgcaagacatccgcctccgagttctgcgcccccctcacctccttcgactggaacgaggccgagccccgccgcatcgggaccgcctccatcgacaccacctgcaccatctgggacatcgagcgcggcgtcgtcgagacgcagctcatcgcgcacgacaaggccgtgcacgacatcgcctggggggagaacggcatcttcgcctccgtctcagccgacggctccgtccgcgtcttcgacctccgggacaaggagcattccaccatcttctacgagagcccccgcccggacacgccgctcctcaggctggcatggaaccgctatgacttccactacatggccaccctgctcatggacagcagcgccgtcgtcgtgctcgacatgcgcgcgcccggggtgccggtggccgaactacacagacaccgggcgtgcgccaacgcggtcgcttgggcgccacaggccacgaggcacctttgctcggctggggacgacggccaagcgctgatttgggagctgccagcgacgcccggcgcagtgccggccgaggggattgatcctgtgatggtgtatgatgccggtgcagagataaaccaactgcaatgggcggcagcttacccggagtggatatcgattgcctttgagaacaaggtccagcttctcagggtctgacgaggttggttcctttggcccttcatggttcaaatagtctattgattcatagcataatatttttaagattgaataatgctgattctaaacattagtattagattttgggattgttgaatttgatttatcagaagcttctacattatactgcaaaagtaacctcattcatcagtcctataaaggttagaatttcctaatattgttgggtgaactcaatttgtgatgaactgtctggtggatatgtttctggaatgatcgacaatacaagatgcctcatttccatacaaactagaaggcatgattattatagtggtgttgtacttgcaccaactgaacaaaggttatcggttcaaaccaaatcgaaacatcaatcagcacacaagcactttttatgacactttgtcaccttcatttgtccattatttcatcctgtgattgtaccacctcctctgccccttccctcaatgttagtcagcactgaccaggattagatgaaatcttcttattttcttgatgtcctggacttgtgtctatttatgatcgtaagttatattctgactgttgatggaaaaaaaaaacagatttagactatgctccattcttttcattattctgtttacaaggtgtaaattcccatcacaacaagagccaacaaggtattttgttcaacatcaaataagaagcgctaactagaagcagaacctagtatgtctgactgccatttatcctaccgtactcgcacttcagatactgtttctggatattattgtctatgtcagtgtccttgtaatatatatgtttcttttaatcttagtcccaacagttctaattctatattgagtaatttgatattttttgcagcagattgtttaatctatctgtataaacataaagcccatacaacaattcctaggcctccctgcttactcttctctggtgcaagctgcattttatttgcttagatgatatattctttaatgccagcatgacataccgccaaatttcgcaatccaagcaatgttcaaatcgcttcacaactgggacatcaatggaacatggcatggaatttgattatgttctacttcgaaaatatttaacttctccttcagctgcctagcatttctaatgtcttgtgaatcatcttaacctttgtctattatcgatgtagtaaccctgtacatttgatatgaaacccccttttttgccatgcagatgttttctgaaggatgttcgactctgaagccttggcgtttcttctattccatcagttcacatgtgtcttatgttggtgatctcttgatatattcattactctactctcctgctaagctacggaaagcatgaaacttgcagcaaggattgatcttgtggccagctttaacttgaactttgtggaagttatctgtgttgtgaacatagaaatatagatactagcctgccagtacaagaatcagctgatgaatggatagatggactgctcactgctcctgcatttagtcctgtagtcattttcgtttttctgctcgtgctgtgctattcatcgcgctaactttcttcatttgcttcttgataacattatcatatgctaatataatatttcctggatatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0682500, RefSeq:Os02g0682500