Os02g0683500

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Revision as of 02:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0683500| Description = Similar to DNA-binding protein RAV1| Version = NM_001054289.1 GI:115447948 GeneID:4330337| Length = 1859 bp| Defini...")
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Gene Name

Os02g0683500

Description

Similar to DNA-binding protein RAV1

Version

NM_001054289.1 GI:115447948 GeneID:4330337

Length

1859 bp

Definition

Oryza sativa Japonica Group Os02g0683500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28819692..28821550

Sequence Coding Region

28819938..28821176

Expression

GEO Profiles:Os02g0683500

Genome Context

<gbrowseImage1> name=NC_008395:28819692..28821550 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28819692..28821550 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcactacaagcagtaggttttctaaagaagaggaggacgaggagcaggatgaggcgggaaggcgagagatccccttcatgacggccacggccgaagccgcgcctgcgcccacgtcgtcgtcgtcgtctcctgctcatcacgcggcttccgcgtcggcgtcggcgtctgcgtcagggagcagcactccctttcgctccgacgatggcgccggggcgtctgggagcggcggcggcggcggcggcggcggagaagcggaggtggtggagaaggagcacatgttcgacaaggtggtgacgccgagcgacgttgggaagctgaaccggctggtgatcccgaagcagtacgccgagaagtacttcccgctggacgcggcggcgaacgagaagggcctcctgctcaacttcgaggaccgcgcggggaagccatggcggttccgctactcctactggaacagcagccagagctacgtgatgaccaaggggtggagccgcttcgtcaaggagaagcgcctcgacgccggggacaccgtctccttctcccgcggcatcggcgacgaggcggcgcggcaccgcctcttcatcgactggaagcgccgcgccgacacccgcgacccgctccggctgccccgcgggctgccgctcccgatgccgctcacgtcgcactacgccccgtgggggatcggcggcggagggggattcttcgtgcagccctcgccgccggccacgctctacgagcaccgcctcaggcaaggcctcgacttccgcgccttcaaccccgccgccgcgatggggaggcaggtcctcctgttcggctcggcgaggattcctccgcaagcaccactgctggcgcgcgcgccgtcgccgctgcaccaccactacacgctgcagccgagcggcgatggtgtaagggcggcgggctcaccggtggtgctcgactcggttccggtcatcgagagccccacgacggccgcgaagcgcgtgcggctgttcggcgtgaacctcgacaacccgcatgccggcggcggcggcggcgccgccgccggcgagtcgagcaatcatggcaatgcactgtcattgcagacgcccgcgtggatgaggagggatccaacactgcggctgctggaattgcctcctcaccaccaccatggcgccgagtcgtccgctgcatcgtctccgtcgtcgtcgtcttcctccaagagggacgcgcattcggccttggatctcgatctgtag</cdnaseq>

Protein Sequence

<aaseq>MEFTTSSRFSKEEEDEEQDEAGRREIPFMTATAEAAPAPTSSSS SPAHHAASASASASASGSSTPFRSDDGAGASGSGGGGGGGGEAEVVEKEHMFDKVVTP SDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRYSYWNSSQSYVM TKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRRADTRDPLRLPRGLPLPM PLTSHYAPWGIGGGGGFFVQPSPPATLYEHRLRQGLDFRAFNPAAAMGRQVLLFGSAR IPPQAPLLARAPSPLHHHYTLQPSGDGVRAAGSPVVLDSVPVIESPTTAAKRVRLFGV NLDNPHAGGGGGAAAGESSNHGNALSLQTPAWMRRDPTLRLLELPPHHHHGAESSAAS SPSSSSSSKRDAHSALDLDL</aaseq>

Gene Sequence

<dnaseqindica>375..1613#catggtcactttctctctctctcttcccaccatatccccaattccccatagcttagaagcgcacaagactcaatgcaaaccgctctgattcctcctctctctgctcttctccctctccctagctagagcttggcttgcttcctccaaacacagctcgagatcaataggaattcataggaacaacaatacaatacatacacgcatacataggtagatcatatccccctctctagtatcctatagcttacttctttgtaacagtgcctatcctcgaacatcttgcagaggaggaagaaggaagaagaagaaggaggagttgggagagaggagcaagaaatacagccaagaatttgaggaaatagtgatagttttctatggagttcactacaagcagtaggttttctaaagaagaggaggacgaggagcaggatgaggcgggaaggcgagagatccccttcatgacggccacggccgaagccgcgcctgcgcccacgtcgtcgtcgtcgtctcctgctcatcacgcggcttccgcgtcggcgtcggcgtctgcgtcagggagcagcactccctttcgctccgacgatggcgccggggcgtctgggagcggcggcggcggcggcggcggcggagaagcggaggtggtggagaaggagcacatgttcgacaaggtggtgacgccgagcgacgttgggaagctgaaccggctggtgatcccgaagcagtacgccgagaagtacttcccgctggacgcggcggcgaacgagaagggcctcctgctcaacttcgaggaccgcgcggggaagccatggcggttccgctactcctactggaacagcagccagagctacgtgatgaccaaggggtggagccgcttcgtcaaggagaagcgcctcgacgccggggacaccgtctccttctcccgcggcatcggcgacgaggcggcgcggcaccgcctcttcatcgactggaagcgccgcgccgacacccgcgacccgctccggctgccccgcgggctgccgctcccgatgccgctcacgtcgcactacgccccgtgggggatcggcggcggagggggattcttcgtgcagccctcgccgccggccacgctctacgagcaccgcctcaggcaaggcctcgacttccgcgccttcaaccccgccgccgcgatggggaggcaggtcctcctgttcggctcggcgaggattcctccgcaagcaccactgctggcgcgcgcgccgtcgccgctgcaccaccactacacgctgcagccgagcggcgatggtgtaagggcggcgggctcaccggtggtgctcgactcggttccggtcatcgagagccccacgacggccgcgaagcgcgtgcggctgttcggcgtgaacctcgacaacccgcatgccggcggcggcggcggcgccgccgccggcgagtcgagcaatcatggcaatgcactgtcattgcagacgcccgcgtggatgaggagggatccaacactgcggctgctggaattgcctcctcaccaccaccatggcgccgagtcgtccgctgcatcgtctccgtcgtcgtcgtcttcctccaagagggacgcgcattcggccttggatctcgatctgtagcgacctaaagagagaaaaacaaaggaaagttcatcaacgattcttttttcttcttctgttttgatttggtttgttcttcttctcgcagcaacatcgatctcactttctcttgtgattccattataacctgaaatttgatgacagcattaggatttgacatttttgttttgttggccacttaattggaatctttctgttggtttgagaagatatagagaattattaggaaacttgaaagttttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0683500, RefSeq:Os02g0683500