Os02g0686600

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Revision as of 02:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0686600| Description = Metal-dependent protein hydrolase family protein| Version = NM_001054307.1 GI:115447984 GeneID:4330356| Length = 438...")
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Gene Name

Os02g0686600

Description

Metal-dependent protein hydrolase family protein

Version

NM_001054307.1 GI:115447984 GeneID:4330356

Length

4388 bp

Definition

Oryza sativa Japonica Group Os02g0686600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29010552..29014939

Sequence Coding Region

29010802..29011026,29011455..29011526,29011620..29011739,29011851..29012042,29013287..29013385
,29013816..29013962,29014678..29014881

Expression

GEO Profiles:Os02g0686600

Genome Context

<gbrowseImage1> name=NC_008395:29010552..29014939 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29010552..29014939 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgcctcgcccaagcgcttgagggtctactcgtccgtctcgggcgacggccgctccgcgaacggcgcggggagcggcaagcgcgtggggacccacaacggcagcttccactgcgacgaggcgctcgggtgctacctcatccgcctcacctcccagttcgccggcgccgacgtcgtccgcacccgcgacccccagatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggcatcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaaaacttagcagtgccgggcttgtttacaagcactttggtaaggagataattgcaaaggagcttgaagttagtgaagaccatgaagatgttcatcggttgtatcttgcaatatataaaagctttgttgaggcgcttgatgcagtcgacaacggaatcaatcaatatgacacagaccaacccccaaagtatgtgaacaacacacacttgtcttcacgcgttgggcgtcttaatccagactggaccgatccagaccagtcacctgagaaggaaaatgctgcatttcaacaggcaatgatgcttgctggaagtgaatttatggagagtgttcgctttcatgttaagtcatggttacctgcgagatctattgtcttggagtgtttgttgtcaagaggaaaggttgatccaagtgaagaaattatggttttggatagattctgcccatggaaacttcatctgtttgagcttgaagaggagctgaagattgatcccctcacgaagtatgtgttgtaccaggatgagaggagcaaaagttggagagtacaagctgttggcgttgctccggatagatttgagagccgaaagcctctgccggaaaagtggaggggcttgagagatgatgaactgtcaaacgatattggcattccaggatgtgtctttgttcatatgagcggcttcattggcggcaataagacgtatgagggagcgttggaaatggcaagagctgctatcaagtgttga</cdnaseq>

Protein Sequence

<aaseq>MAAAASPKRLRVYSSVSGDGRSANGAGSGKRVGTHNGSFHCDEA LGCYLIRLTSQFAGADVVRTRDPQILDTLDAVLDVGGVYDPSRHRYDHHQKGFNEVFG HGFNTKLSSAGLVYKHFGKEIIAKELEVSEDHEDVHRLYLAIYKSFVEALDAVDNGIN QYDTDQPPKYVNNTHLSSRVGRLNPDWTDPDQSPEKENAAFQQAMMLAGSEFMESVRF HVKSWLPARSIVLECLLSRGKVDPSEEIMVLDRFCPWKLHLFELEEELKIDPLTKYVL YQDERSKSWRVQAVGVAPDRFESRKPLPEKWRGLRDDELSNDIGIPGCVFVHMSGFIG GNKTYEGALEMARAAIKC</aaseq>

Gene Sequence

<dnaseqindica>3914..4138#3414..3485#3201..3320#2898..3089#1555..1653#978..1124#59..262#gcagcgagccgtcacgttcattccccgcgtgcgatcccaaaccctaaaccctctccccatggccgccgccgcctcgcccaagcgcttgagggtctactcgtccgtctcgggcgacggccgctccgcgaacggcgcggggagcggcaagcgcgtggggacccacaacggcagcttccactgcgacgaggcgctcgggtgctacctcatccgcctcacctcccagttcgccggcgccgacgtcgtccgcacccgcgacccccaggtctcttgccttctcactggctcgattaacctaccattgccttacatttttttggttttttttttgttttttttctgttttttttgggtggggggtggttggggggggggggggttgtaaaatgactttggttctgtgaagtttgtctgtctctaggggttgcgttgcgggtctgtacgcggcagttcctacaatttgtagacatgttgtgtttcaattagattctgtatatactaataatgcaactctctgttaaacttaactgagttgtgtttttctcctaattacgtataatctggtgtcctgaattgtacatgctgcttttagatgtggcatttaacaatttgccactggacacacatgtcatagacacatgatggcccatatatcatagattatgagtggcaaattgttacacaccacatcttaaaagtagcaaatagttaaatgtcccgcttgcatctgtgctagatgtgtgtcttagttaggtgctgatgattttactcttatccatgacagaatgattcccattgtactagcgtctgtgcaacaattagtacagtacagattgttgtgtaatttatgtaaaaatcgctgcttgtagttgtatatgatacaataatcataaaccttctcatttggtgtaatgtgctcttagattcttagatctttaacttacctgtatttccctttttcttgttgggcatcattgtagatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggcatcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaaaacttagcagtgccgggcttgtttacaaggtacttcccatggataattcacattctgaaacctgagcttttttcctgacaacttgttagcaaacacgacgatgaacaaagttctctacattgttaggtagaaccttgaaactgctacataagaggctttaactgcattaccacgctagacagattgatgggccatttattagtggatttaagatcatgatgtccttttgtgatgtattagaccgagatgcacttgctagtgtggtatattgcagtccttttgtgatcctcctgcgttcgatccttgatgtgctcatggattcttcttaattatttgacaccaagttcctccttggttgtccagcatgatgtattagaccattgaaatttacaagttgccatttgaggaccatgactatagttcagatgtttaccactgattcttgacttgatgttacagcactttggtaaggagataattgcaaaggagcttgaagttagtgaagaccatgaagatgttcatcggttgtatcttgcaatatataaaagctttgttgaggtatgaagctgcacagataatcaacctttgaatgtttactgtcgtgcttttgatacactaaatgattatgttgaatcttgagtaagatctcttcttttaaacttccatttctgtttgttttgccacttttgccaactctttttttggagagaatcaaaggttggctggaatttaggtaaatgtttgccttgtgggtgtgctttgttgtgttcagtctataactatacactgaaatcgcctgatttatttggacgtctgcatcactctgtctttttttgacctaagaagtgttgacgtgccagatatcaccattgagtacttgagtatgcttactgtgttaatgtcttggtgatataaatctgtgcatcggcattatttgaatagcagtagtgagcaccctttaggccttgttcgtttaatccccatgatggcttgttcggttaatgccaccaacaaggggattgaggggggattggaggagttgtggaattattcccctcaatcccctctaatccctccttcatggagattaaacactccaatccttctttcatggagattaaatgaacaaggaaggagaagtaaacgaacaaggaaggagaaggagggattggaggggattgagggggtgtggaattatttccctccaatccccctcaatccccttgttcgtgggttaattggtgggattatccgaacaagcccttaaggggaatagaatagttgataaattgcagctccattatacatccactagcagacatacagcaagaaatatttgctaggcacatattagatcctttgttttatcttaggagcatggaaccaactaacaaatatcatagcttagcgactgcctactacaaggttaatgcttcaatgtttcatccgtacttttgcattaccttgatgggcttttcacgatctacttttgaattagcttgataggctgcatgcactgtatgtggcaaaatatgattactatccagtctgcgtttggtgccaattataaagttagcagagaagggtgtagaggcatcagatatacttgaatgcaagtaattttttttgtttaagtttaaccgttatactaaggagtagaaagcttcaatctataaagcatcaattcacatcattttttcttaagacatcttttatacactgttattaatttatgtgtttatgcatctaccccaatatttctgcatgatcccagagaaacaataacttttgtcatgtgacaggcgcttgatgcagtcgacaacggaatcaatcaatatgacacagaccaacccccaaagtatgtgaacaacacacacttgtcttcacgcgttgggcgtcttaatccagactggaccgatccagaccagtcacctgagaaggaaaatgctgcatttcaacaggcaatgatgcttgctggaagtgaatttatggaggtataatagtctctgtatgtgatacgttagtttactgcatgagaactttgtttttagtgtgtcgccattcatctctttgtatatgataatattttgcaccttcacttccagagtgttcgctttcatgttaagtcatggttacctgcgagatctattgtcttggagtgtttgttgtcaagaggaaaggttgatccaagtgaagaaattatggttttggatagattctgcccagtaagatcttttttcaggaataccctgctgaattgactaacatattgaatcattccaagcatgtaatttgagaatctcttattatcattgcagtggaaacttcatctgtttgagcttgaagaggagctgaagattgatcccctcacgaagtatgtgttgtaccaggtgagaagtgttgcctttctcagcctatgatatgaatatcttgatgtagttctagttgcataagctgaaatcgagaagtagcatgtagcttgaagctctagcagagactcagttttcttttggatttacgtttcacagccttgaaagtaaattttactttaagtgcaatcatttatactatgccatgtttcctccattttgtcattaacccttagggtggtcttgctgatttccaccttgttttgtcttactctcgtcaaacaccgttttattcaatctaagaaagaaggaaaagggcccttgtttatgcacttaaaattgtagttctgaacttctgatcatagaataaactctctttctagcgttggccagtagcatgctaaaagtattgatgtctgcgtatgctgatttggataacgtaattgcaggatgagaggagcaaaagttggagagtacaagctgttggcgttgctccggatagatttgagagccgaaagcctctgccggaaaagtggaggggcttgagagatgatgaactgtcaaacgatattggcattccaggatgtgtctttgttcatatgagcggcttcattggcggcaataagacgtatgagggagcgttggaaatggcaagagctgctatcaagtgttgactcaacgttcgacggaggcttcaatcagtaacgcactgtcacccatgagctgcagtaacacagttaaccagttgaacttcatgttattattgactcgtaattgacatttgagtactcatgttccttgcgtaaaacatccttagctgacaggagaggccagttgcctttttaatctcgaacgacgagtttatgattacattttataaagattagaaaagatgatgggacatatccatttgtcgtggtaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0686600, RefSeq:Os02g0686600