Os02g0689900

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Revision as of 02:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0689900| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001054322.1 GI:115448014 GeneID:433037...")
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Gene Name

Os02g0689900

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001054322.1 GI:115448014 GeneID:4330372

Length

3500 bp

Definition

Oryza sativa Japonica Group Os02g0689900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29199557..29203056

Sequence Coding Region

29199847..29200726,29200800..29201356,29201822..29202039,29202567..29202741,29202940..29202942

Expression

GEO Profiles:Os02g0689900

Genome Context

<gbrowseImage1> name=NC_008395:29199557..29203056 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29199557..29203056 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggcaacgacggagacatgaagatgagggtgatcgtcgtggaaggcgatgagacgagtaacgccccgaaggatgtatgctgcgagtacaccctcgatggctccgtggatatcaagggctcaccggcggtgaagggcaagtccggcggatggctcgccggcggccttattcttctgaaccagggtctggcaaccctggcgttcttcggggtaaacgtgaacctggtgttgttcctgacgagggtgctgcagcagagcaacggcgacgccgccaacaacgtgagcaaatggaccggcacggtttacatgttctccctcatcggcgccttcctcagcgactcctactggggccgctacaagacctgcgccatattccaggccatctttgtccttggcctcgcgctgctgtccctgtcgtcgcggctgtacctgatcaggccggtcgggtgcggcacggagcacgtgccctgcgagccgcactccggcgcggagctggggatcttctacatcgcgctgtacatgatcgcgttcggcaacggcgggtaccagcccaacgtcgccaccttcggcgccgaccagttcgacggcgaggacccggccgagtcgcactccaaggtctccttcttcagctacttctacctggcgctcaacctcggctcgctcttctccaacaccttcctcagcttcctcgaggacgagggcaactgggcgctcggcttctgggtctccaccgccgccgcggccaccgcgctgctgctgttcctcggcggcacgctccgctaccggtacatccgccccagcggcaacccggttggcaggatcttccaggtcgcgttcgccgcgtgcaggaactggaaggccggcgagtcgccgggcgccgtgacactctacgagagcgacgagaaggcggattccggtgggaggaagctcctgcacacggaaggtttcaggttcttggaccgtgcggcggtggtgggcgctaacccgaagcttggcacgtgcacccaaccgcgtgacccctggaagctgtgcacggtgacgcaggtggaggaggtgaagagcatcctgcggctcctccccatctggctctgcaccatcctctattcggtcgtgttcacgcagatggcgtcgctgttcgtcgtgcagggcgccgcgatgcgccgcaccacccggttcccgggcttctccgtcccgccctccagcatgtcggccttcgacatcctcaccgtcgccaccaccatcttcctgtaccgccgggccgtctgcccgctcgtgtcgcggctcacgggccgccacaccggcccaaccgagctgcagaggatgggcctcggcctggtgctcggcgcgatggccatggccaccgccggcacggtcgagcacttcaggaaggccggcgccaccacggcgatgagcagcgacctgcacatcatgtggcaggtgccgcagtacgcgctgatcggcgtgtcggaggtgatgatgtacgtcggccagctcgagttcttcaacggggagatgcccgacgcgctcaagagcttcgggagcgcgctctgcatgatgtccatgtcgctcggcaactacttcagcgacgtcatcgtgagcgcggtgaccaaggccaccgccgtgcgcggccgccccggctggatccccgccgaccttaacgagggccacctcgacaagttcttcttcctgctcgccgtgctggccgtcgcggacttcgccgtgtacctcgtgtgcgcgagccggtacaggagtggcacggtggacgtcgaccggagcgacggggaggaggaggatggcgtggccggcaggcagatggcggcaacggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MSGNDGDMKMRVIVVEGDETSNAPKDVCCEYTLDGSVDIKGSPA VKGKSGGWLAGGLILLNQGLATLAFFGVNVNLVLFLTRVLQQSNGDAANNVSKWTGTV YMFSLIGAFLSDSYWGRYKTCAIFQAIFVLGLALLSLSSRLYLIRPVGCGTEHVPCEP HSGAELGIFYIALYMIAFGNGGYQPNVATFGADQFDGEDPAESHSKVSFFSYFYLALN LGSLFSNTFLSFLEDEGNWALGFWVSTAAAATALLLFLGGTLRYRYIRPSGNPVGRIF QVAFAACRNWKAGESPGAVTLYESDEKADSGGRKLLHTEGFRFLDRAAVVGANPKLGT CTQPRDPWKLCTVTQVEEVKSILRLLPIWLCTILYSVVFTQMASLFVVQGAAMRRTTR FPGFSVPPSSMSAFDILTVATTIFLYRRAVCPLVSRLTGRHTGPTELQRMGLGLVLGA MAMATAGTVEHFRKAGATTAMSSDLHIMWQVPQYALIGVSEVMMYVGQLEFFNGEMPD ALKSFGSALCMMSMSLGNYFSDVIVSAVTKATAVRGRPGWIPADLNEGHLDKFFFLLA VLAVADFAVYLVCASRYRSGTVDVDRSDGEEEDGVAGRQMAATV</aaseq>

Gene Sequence

<dnaseqindica>2331..3210#1701..2257#1018..1235#316..490#115..117#cacttccatagatcccctcctcttcttcctcctgctcggcttcctcacacagagcttctcgttgcattagccgacggaggccaccggtgaggagagcccgaggaggagcaagaaatggttagtacgtgctcatgatttgatcgttcttggcatatatgttagcaaagctacacggtttcagcttgtttctgtagcttgttggtctgtagccaagattcagttttgtctccatgttcagtgatgaaacaccatgcgtatacatggcagcacatgaaactggaaactaactgacagcatgtaacttgatggttgcagtctggcaacgacggagacatgaagatgagggtgatcgtcgtggaaggcgatgagacgagtaacgccccgaaggatgtatgctgcgagtacaccctcgatggctccgtggatatcaagggctcaccggcggtgaagggcaagtccggcggatggctcgccggcggccttattcttcgtaagtactttgtgctgaactctgctgatttcaccatctccttcccggctgagacgggccagcaaaaaatggagacaaagtcgatgactgggctttccagtgaagtgttttcgcaacagtgcaagtcggtctgaggtgactcgacgttgaggcttaaagtggcggtaggcgccgggtctttacgcggaatgctgcatgacgaggtgacatcggccatgcaacgcccacaactggagggttcctcgccacgggggattcgggcgcacgcattactagcgccacattaggatctccgtaggagacatcggacatggtatccacgatgtagcaaccatgcatagcgatcaaatgatcgatcgatctgtagggtatgtggagtacgatatcgccctaccacagtttggctttattgctgctttcatgggggagttaagcggcgcactgtttgcatgtgtgcatcgttttatgtttgtttagaattattcttgaaggccttgacacctttttattttgtgtgtgttgtgcagtgaaccagggtctggcaaccctggcgttcttcggggtaaacgtgaacctggtgttgttcctgacgagggtgctgcagcagagcaacggcgacgccgccaacaacgtgagcaaatggaccggcacggtttacatgttctccctcatcggcgccttcctcagcgactcctactggggccgctacaagacctgcgccatattccaggccatctttgtccttgtaagcaccaccacacggcacatccctctctctccgcagttctatctgaaaaccacgcgcctttctcggtgcgatcgattgatctcatgtttctagctacttcggtctgatctgttggtcgggcaatcatcagtgaccagttttttccgttctgattgcccatttcacgggaaatgatggtctatagatgcgtaggaacgtacgtacaaagtaacagcgattggtgcgggagaatctgtccagagtggagttaattcggcctgtactctgtactgggtggattgtatctgcacgtatgctggtgtcgaaagtggatggtccatatagtagaggcatagagtagtacgtggtggcgccgaccggtcggtcgatcggcccaaggcacatcgcggtcgcgttgcgcgtacgcccaggagatgtggatcacgcggctgactcgttcgcgtcacggtgttttgcctgcagggcctcgcgctgctgtccctgtcgtcgcggctgtacctgatcaggccggtcgggtgcggcacggagcacgtgccctgcgagccgcactccggcgcggagctggggatcttctacatcgcgctgtacatgatcgcgttcggcaacggcgggtaccagcccaacgtcgccaccttcggcgccgaccagttcgacggcgaggacccggccgagtcgcactccaaggtctccttcttcagctacttctacctggcgctcaacctcggctcgctcttctccaacaccttcctcagcttcctcgaggacgagggcaactgggcgctcggcttctgggtctccaccgccgccgcggccaccgcgctgctgctgttcctcggcggcacgctccgctaccggtacatccgccccagcggcaacccggttggcaggatcttccaggtcgcgttcgccgcgtgcaggaactggaaggccggcgagtcgccgggcgccgtgacactctacgagagcgacgagaaggcggattccggtgggaggaagctcctgcacacggaaggtttcaggtaaagtgttgtgtggttttgtgagctgtgaactgatcacgcatgcacgcactgaactcgccatgtattgcaggttcttggaccgtgcggcggtggtgggcgctaacccgaagcttggcacgtgcacccaaccgcgtgacccctggaagctgtgcacggtgacgcaggtggaggaggtgaagagcatcctgcggctcctccccatctggctctgcaccatcctctattcggtcgtgttcacgcagatggcgtcgctgttcgtcgtgcagggcgccgcgatgcgccgcaccacccggttcccgggcttctccgtcccgccctccagcatgtcggccttcgacatcctcaccgtcgccaccaccatcttcctgtaccgccgggccgtctgcccgctcgtgtcgcggctcacgggccgccacaccggcccaaccgagctgcagaggatgggcctcggcctggtgctcggcgcgatggccatggccaccgccggcacggtcgagcacttcaggaaggccggcgccaccacggcgatgagcagcgacctgcacatcatgtggcaggtgccgcagtacgcgctgatcggcgtgtcggaggtgatgatgtacgtcggccagctcgagttcttcaacggggagatgcccgacgcgctcaagagcttcgggagcgcgctctgcatgatgtccatgtcgctcggcaactacttcagcgacgtcatcgtgagcgcggtgaccaaggccaccgccgtgcgcggccgccccggctggatccccgccgaccttaacgagggccacctcgacaagttcttcttcctgctcgccgtgctggccgtcgcggacttcgccgtgtacctcgtgtgcgcgagccggtacaggagtggcacggtggacgtcgaccggagcgacggggaggaggaggatggcgtggccggcaggcagatggcggcaacggtgtaagcgtcaggatgaatcggccgtctgctcgcgctcgatagatgcatggcaggctgtcgtggttcttgagacggagactgcagactcttcgaggggatgagttgcattgggacgagttggtttagcacgacaagtctccgttgatgataggacatgcacggggggatagtgacacgatactaaagaataagaggtcgcctacagatgcagtattgttctatcatgtacgcctgtgtttcatcgtttcacatttttctggccaatgtaacaagagaacgcgactgttactgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0689900, RefSeq:Os02g0689900