Os02g0690700

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Revision as of 02:47, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0690700| Description = Clathrin adaptor complex, medium chain family protein| Version = NM_001054328.1 GI:115448026 GeneID:4330379| Length ...")
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Gene Name

Os02g0690700

Description

Clathrin adaptor complex, medium chain family protein

Version

NM_001054328.1 GI:115448026 GeneID:4330379

Length

4906 bp

Definition

Oryza sativa Japonica Group Os02g0690700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29242464..29247369

Sequence Coding Region

29242666..29242748,29243494..29243671,29244343..29244433,29244530..29244624,29244747..29244836
,29245157..29245205,29245309..29245447,29245592..29245708,29245805..29245895
,29245972..29246114,29246377..29246491,29246807..29246851,29246933..29247013

Expression

GEO Profiles:Os02g0690700

Genome Context

<gbrowseImage1> name=NC_008395:29242464..29247369 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29242464..29247369 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggtggcggcgtcggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacatgccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctatattgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggaggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaaataactttgttttaatctatgagcttcttgatgaaattatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccattttcctccaagccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttggagaagagagggtcttatgtacaagaagaacgaggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagggagtgttctacgatgtgatgtgactgggaagattcttatgaagtgcttcctttctggaatgcctgatctgaaattgggattaaatgacaagatcgggcttgaaaaagaagctcaactcaagtccaggcctgcaaagagcggaaagaccattgagcttgatgatgtcacattccaccagtgtgtcaacttgacaagatttaactcagaaaagacagtcagctttgtgccgccagacggtgaatttgaattgatgaaatatcgaatcactgagggtgtaaatctcccattccgggttctaccaacgattaaggaattgggccgaacacgcatggagataaatgttaaagttaagagtgtttttggtgctaagatgtttgcacttggtgttgtcgtcaaagtccctgttccaaaacaaacagcaaagactagtttccaaaccacatctgggaaagccaaatataatgcttcaattgattccctagtgtggaagatcaggaagtttcctggacaaactgaggcaaccatgagtgccgaagttgagctgatttctacaatgggggaaaagaaatcatggaacaggccgccaattcagatggaattccaggttcctatgtttactgcttctgggttacgagttcggttccttaaggtgtgggagaagagcggttacaacaccgttgagtgggttcgctacatcacaagggctggatcatatgagataaggtgttag</cdnaseq>

Protein Sequence

<aaseq>MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKE LGTCPVRQIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDE DAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATL QVTGAVGWRREGLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPD LKLGLNDKIGLEKEAQLKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGE FELMKYRITEGVNLPFRVLPTIKELGRTRMEINVKVKSVFGAKMFALGVVVKVPVPKQ TAKTSFQTTSGKAKYNASIDSLVWKIRKFPGQTEATMSAEVELISTMGEKKSWNRPPI QMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIRC</aaseq>

Gene Sequence

<dnaseqindica>203..285#1031..1208#1880..1970#2067..2161#2284..2373#2694..2742#2846..2984#3129..3245#3342..3432#3509..3651#3914..4028#4344..4388#4470..4550#ggggctggttgctcgtgctgcccccgagatctaaccaaaacccgcgtcccatctcacctcgcctcacctcaccatccgacgagcccccggatcaccggctccgacctgtcgccggcggagagcgccgcgggatccaggcgttgaggttggggagcggggtgtgtgtgccaggcgctcgggcgggggcgagcgggcggcgacgatgccggtggcggcgtcggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacgatgtcgggtgcgtagtaccgttcgcaatcatccccccctcgcctcgcctcgtcgtctcgccgcgcctcctgcgcccgcgccgctcgtggtttggagtggtagatctgaggccgttgggatcgattagctccgtttcctagctcgccgttgcgcggatcgcgcgaggtctagtggatagctcgtgaaattccgctcggaaaggcttcgattagcgaacgggatgcggggattgactcgttgcgtgctgaaatttggcccctaccctcaggttgtcgcaataccatgtggttgaatttcggaatggtatctcgttctttagcttgtgattgtggaagctacatgttttgcagcatgaaggaagatgccactgactgaaatactgaataggagaattagttcgatttcaccttggatggctgtgctgtggtggtcgattatctgaaacaattgactttatactatttcccctccacattctgaattcgatgttgtgttgactgaagcatttcatataagctgactgctgcatagctcatatgatctttcctagtggtttactatcgagaaagatatagcaagtggccttgttgtctttaatacgatagccattattttctaagggtgctaaaaatgtaaactaccactaaacattttcggtttgcttgtcttacttaaaaccctcttttttttggtatttggttgcgtgcaagtttactgaccacctgttttgctcattatgtatgactatacaggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacatgccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctatattgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggaggtatgcaatttatatcatctttgaataatttggaataaaataaatataacatgcatacatattacatctctatgatctagatgaatatgaagctcaagaagtcaattgttgttttttccgctagaaatggtatgtctatgttagtgtgttgtagcatagatggctagtctaattcctcaataagtccagagcaaaagaatctattagttactaaagaggcatatgatttttctgaagttacctgtttaataataataataattttaaattgcaatatgccgtcgaaaagtttagacagttttaccatctaatgatggtatgttttgggggcaactagaattttctatcgcttaagcgtaattgcgtaaatggtgatgattttttgaggaaccaaaagttttttttttccttgaatggctacatggtcgatgttccttgttaatcattgctggaaaatactccttaagccctgtttcgatgctttctataatttcttaagccctgtttgatgaggctgactgggcgtagaattagtttaactagttggtagatgtgagtcaataatgaagcttcagttataaattctagacatatatccttctgatacctgcatatcatcctctagtgttttgaacggttttttatgtatgattttttttgtaaattaccaggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaaataactttgttttaatctatgagcttcttgatggtaagggacatcttatttttggactttgtttcatcaatttgcactgtggatgcttctatttacctgtagaactgtctctctcatctaactgtgcagaaattatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccattttcctccaaggtgagaaaaatgtgacattgaaataagataaccggataaaaagtcacatcaaatagtttgttgctcatttattttgtgtgaaagcatctgaatcattttttttttgttctctgcactgatagccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttggagaagagagggtcttatgtacaagaagaacgaggtgcctgttccaaatgccacctccaagtttcatctgtatttggacatattatgcattgctagctagctagcatttctaataatcccagctcagcatagatgctagtaatgtcagaacgctgcatgtatttcgacatgcagaatagttttcatacatattgtcaatgtgcactagattgcctgttacagaagtagtccatactttatttgttgatttctttgttgccattttggttctgcatactttatttctttttagcactttgcatgactctttttagcattgagatacactaatatagtattcttttctcttgaaaggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaaggtatttcatggattactatgattttattgtactgctctgatgtttttgttgtccttaatgttgctttgactgatgtttaatgtggaaattgccttctctgcagggagtgttctacgatgtgatgtgactgggaagattcttatgaagtgcttcctttctggaatgcctgatctgaaattgggattaaatgacaagatcgggcttgaaaaagaagctcaactcaagtccaggcctgcaaagaggtatcactttatcaataattagtacatgaagaaaaaaaattgagcatctggtttttctgattagtatagtttatatggtatgtacacaatctttactactttaactgaattgtctgctggtcggttctcctttttcctcaacagcggaaagaccattgagcttgatgatgtcacattccaccagtgtgtcaacttgacaagatttaactcagaaaagacagtcagctttgtgccgccagacggtgaatttgaattgatgaagtaatattatgatccctccttatgcttgtattagttttcccctgtagtgacatttttattctttacttggcttttgaccacaaaattctgttgtagatatcgaatcactgagggtgtaaatctcccattccgggttctaccaacgattaaggaattgggccgaacacgcatggagataaatgttaaagtaagtgtgcatatctgaaattgtgaatgcatgaggccattatcacgttttctgacacgatgaaccttttacacaggttaagagtgtttttggtgctaagatgtttgcacttggtgttgtcgtcaaagtccctgttccaaaacaaacagcaaagactagtttccaaaccacatctgggaaagccaaatataatgcttcaattgattccctagtgtggaagtaagtgcaaattatttctatatagcagtttatctatgagaaagatgttctttggcttttctttttatgggttaggtcttgttctggcagagcataaacataaacctaccaatttttgttggttacggtgtacaaagctgtatccgatgctatattggctcaattttcttactcttgaagagctactccttgccaattttgccacaaatttattagcatgccttttgcactcataagtcttgacacacttctgcaattataggatcaggaagtttcctggacaaactgaggcaaccatgagtgccgaagttgagctgatttctacaatgggggaaaagaaatcatggaacaggccgccaattcagatggaattccaggttaattttacctccttttgaacaaccctcttatcattagcaaaatctgtcagccagttcattttatttttgagcttacagaaaatgcaatgttagagatatcataacagttatgaattaaacttgagcatgcacaagaaaaaaaaatggtattccatcattcgttggcctttgagtatgtttattatccgaggtgttatcttgaagtgttcttacaaaaaaaaacatcttctgcttcattgttatgctgataaaatgtgccttcgagtttggttatcttgtttaaccatgctttctgatttgttgtttctgtaggttcctatgtttactgcttctgggttacgagttcggttccttaaggtacgtgcagggaatgctaatatagaacctttttaacacataccagacagttcagaactcatgttgagatgcatattccaggtgtgggagaagagcggttacaacaccgttgagtgggttcgctacatcacaagggctggatcatatgagataaggtgttagcgatgaagaaaaaagtcccaggtatttggcacggttatttcaaggattcgcggagctttctttctagtacggcgtcatgaatgatcataaagcatgtatattacatatgacaccactttttctttaagctattactttggcaaagggtagagcagagcagacaaattttcctgggttcttgtaatcgttttgacacgggatatctagtatcccctgagtcttgtttgtgtggtagggcatattttcatttgtatatgagaagatggcggtagcgtttgttcttgttgatcaatatacatatactcattggcagtttgtattgctttcttattaaattgatgggtgaattcacttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0690700, RefSeq:Os02g0690700