Os10g0437700

From RiceWiki
Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0437700| Description = HSP20-like chaperone domain containing protein| Version = NM_001071214.1 GI:115482171 GeneID:4348712| Length = 2060 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0437700

Description

HSP20-like chaperone domain containing protein

Version

NM_001071214.1 GI:115482171 GeneID:4348712

Length

2060 bp

Definition

Oryza sativa Japonica Group Os10g0437700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16138745..16140804

Sequence Coding Region

16138850..16138950,16140162..16140552

Expression

GEO Profiles:Os10g0437700

Genome Context

<gbrowseImage1> name=NC_008403:16138745..16140804 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16138745..16140804 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcgccggcggccgctcgtacgaggacttcaagccgccgcacaagatggtccgcgagccgcccacgcacaccctcaccatcgatctctccgccaaagggtacaagaaggagcacatcaaggtgcagctggtccgcagccggcggcggctggtcgtgagcggcgagtgccccgtcgccggcgagaccaaccggtggagccgcttccggctgcagttcccggtgcccgacggctgcgacctcaaggccatccaggcgaggctccacgacggcgtcatccgcgtcaccctgcccggcgtcaagccgcagcagcagccgccgcccgccaagacggccgccgccgccgcggtagtaggaggggatcagcggggcggcggcgaacgatgccaattcctccgggagcggggaaagctcgcgaccaccctgctcggcgtggtgctcgtcttgtttagcttcgtcatctacatcaggtacagcgtgaagccatga</cdnaseq>

Protein Sequence

<aaseq>MDGAGGRSYEDFKPPHKMVREPPTHTLTIDLSAKGYKKEHIKVQ LVRSRRRLVVSGECPVAGETNRWSRFRLQFPVPDGCDLKAIQARLHDGVIRVTLPGVK PQQQPPPAKTAAAAAVVGGDQRGGGERCQFLRERGKLATTLLGVVLVLFSFVIYIRYS VKP</aaseq>

Gene Sequence

<dnaseqindica>106..206#1418..1808#aagctataatcaaagctacttctgcctagctgaatcccttcatcctgcggcacaccgattttgggggtgaattgagcggtagctccgtcggttgaggaggaagagatggacggcgccggcggccgctcgtacgaggacttcaagccgccgcacaagatggtccgcgagccgcccacgcacaccctcaccatcgatctctccgccaaaggcaaagctctcctgcgtctccaatttttcatgagcagtcctattacatacatacatgctcttttgatttgttgctatgcatatttagctactttagggcatgtttagttcccaaacaaaatttttcgcgttgtcacattaaatatttggacacatgcatggagtattaaatatagacaaaaaaaaaaccagttacacaatttgccagaaaattgcgagacgaatcttttaagcctaagtgtgccatgatttgacaatatggtgctacagtaaatatttgataataacggattaattaggcataataattaaattcgtctcacggtttcctggcggaatctgcattttgtttttttattagactatgtttaataatttaaatatgtatccgtatatctgatgtgatgtgcaggggaaaactttttgccaactaaacatgcccttagactgagttcggccaactttgtctgacacggaaaacaaagcaaatgattagaaccagattaattaagtattagcttaaaaaacttgaaaatggattaataaaagcaactttcctatagaaaacttttgcaaaaattcacaccgtttaataatttgaaaagtgtgtgcgtgaaaaatgatggaggcgagttgagaaaaaaagggaagaacacaaccttaacataagaataaagtttcttttttctttcaaaatgcttttcgtgtgctctgtcccattttaaacgctgttgtatacgaaaatgcatagggagtacacattattagcacccgtacattctatacacctggaagatgcgtcctcgcagaaagaaaaaaaaaagttacttgtggtaatacacacgtcgtccctgacgattatttaaggaagaatggttctgttcttttcagttaattcaacagattatattattgccatcatatcatgaagtatttgttccacacgcaaaagaaatacgttttgttgaaaaatatttttgtactacattgctcgatcccttaacaaagctatttgtttttaaactgagatcattattatatttcaaatgatccggcttttggtagaaagccaagataacgaaatactacatgttaagtttatttatcaaaatatttaatttatatctacaattgtgtcgataatttgtttcaaattggacaaagtttatgactcgttccattttggtgatcgatggcgtgtcatatatgcagggtacaagaaggagcacatcaaggtgcagctggtccgcagccggcggcggctggtcgtgagcggcgagtgccccgtcgccggcgagaccaaccggtggagccgcttccggctgcagttcccggtgcccgacggctgcgacctcaaggccatccaggcgaggctccacgacggcgtcatccgcgtcaccctgcccggcgtcaagccgcagcagcagccgccgcccgccaagacggccgccgccgccgcggtagtaggaggggatcagcggggcggcggcgaacgatgccaattcctccgggagcggggaaagctcgcgaccaccctgctcggcgtggtgctcgtcttgtttagcttcgtcatctacatcaggtacagcgtgaagccatgaaccggggggacacacggtatttatttctgagatgacgagcactgatcgatcgcgatgatgcgatgggtttcgctgtaagaattaatgaaatccatctgaatggaaaaatgaaaatggaaatgtaaacaaagccttggctttttctgttcatatatatgatcatccatgtcgcatgaaagagatgtccccatgcaaatccttgtgcagtactatcatctgactttaagtggctaacatgtgggccttataccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0437700, RefSeq:Os10g0437700