Os02g0699400

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Revision as of 02:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0699400| Description = RelA/SpoT domain containing protein| Version = NM_001054365.2 GI:297599792 GeneID:4330423| Length = 7008 bp| Defini...")
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Gene Name

Os02g0699400

Description

RelA/SpoT domain containing protein

Version

NM_001054365.2 GI:297599792 GeneID:4330423

Length

7008 bp

Definition

Oryza sativa Japonica Group Os02g0699400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29646761..29653768

Sequence Coding Region

29646761..29647118,29647608..29647666,29647759..29647890,29647980..29648158,29648581..29648662
,29649209..29649349,29649994..29650173,29650405..29650598,29650715..29650781
,29650961..29651094,29651391..29651457,29651749..29651811,29652216..29652454
,29652544..29652673,29652752..29652844,29653094..29653297,29653484..29653768

Expression

GEO Profiles:Os02g0699400

Genome Context

<gbrowseImage1> name=NC_008395:29646761..29653768 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29646761..29653768 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccatcgccggcggcgtccacgtccgcctctgacgccgggatgctcggccggcgcgtggtgatgctcccgtcggcggcggcggcgctggggctgcgccggggccgggcgcggatgcggctggggtgcgtgctcgagcacgtggccccgcggctcgcggtggcgtcggccgcgctcctgggggccggggaggtcatcgccgcggccgccgcggcggggaaaagcggcggggccgggcacgccgccgtggcgtcgacgctcgcgcagcttacggtcacggccgtggcgatcgcctcgggggcgtgcctgtcgaccaaggtcgacttcctctggcctcgcatcgagcaactgcccgacactcttatatttgaaggagtagaggtgactggatatccaatatttgaggacccaaaggtgcagaaagcaattgtttttgcaagtactgcccacattgggcaatttaggaaaacaggagatccatatgtcacacactgtatacatactgggaaaatcttagctgccttggtcccgtcaactggagaaagggcaatcaatacagttgttgctggtattcttcatgatgttattgatgatacagctgagaacttgaagagcatagaagagcagtttggagatgatgttgctagtttggtatctggtgtttcaaagctaagctacataaatcaggtgatgcatatgttagaaaaaaccctgttgagtgctgactactgcgcaggcatcgacaaaaaaacaccggtggaagcactcttacttcagaagaagtatgttctcttctatgctagcaagtatttcagctatgctcttcccattcgcaaagctgaagctgttgctcaagagacattggctgtctggtgctcacttgcttctcgattgggtgtctgggctttgaaagctgagctagaagatttatgctttgctgtccttcagccccacgttttcaagaaaatgcgatctgaacttactacaatgtggaattcaaccaacaaaactaaaagcacaagaaggtcatcaataagaagtggactacctgcctcaacaaaggatgtgcatacaacttccgtccatgattttttcagtctgagtaaccaagaaaaaccaaacatgaaggacttattgcaagctgtattgccatttgacctccttttggatcggaaaagacgatcctacttcctaaataatctccatggcagttctgaaacatctgtaccaaagcctaagattgttgatgacgctgctgttgcattagcatctttagcagcttgtgaggaagaacttgaacaagaattacttatatcgacatcgtatatacctgggatggaagtaactttgtcaagtagactcaagagcttgtatagcatgtactgtaagatgaaaaggaaacatgtaggcattaaacaaatctatgatgctcgtgcattgagggtgatcattggagacaaaaacggtgcattgcatggacctgctgtcaagaattgctacagcgtccttgatatagtaaacaggctatggactccaattgatggggagtttgatgactacattatcaaccctaagggtagtggttaccaatcactccatacggcagttcaggcatcggataactcaccactggaggtccaaataaggacccagcgaatgcatgaatatgcagaatatggactcgctgctcactggctgtataaggagagcaaagttgactacagaagtggcacgagtaacaagataggacaaagtacatcgtacccatcaagttcttcggaagatgaaaactacatacaagatgttatgccctcaaagtacagttctatgaaaatggggcatccagtcctaagaattgagggcagccagttactggcagctgtcattgtcagtatagataaagggggaaaagagttgcttgttgctgtcagttttggccttgaagcttctgaagctgtagctgaacgaagatcttgcttccagttgaaacgctgggaaacttatgctagagtttacaaaaaggtttcagagaaatggtggtgtgcaccaggacatggtgactggtcaacaaacctggagaagtatacattgtgccaggatgggatattccataagcaagaccaatttgggaggcttttgcctacttttattcaacttattgatttgacggaagaggaagaggaagaatattggatggttgtatcagccatatttgagggtaaagaggcctcatctctgactcccgattcaagcaacactgaacgatcgacatctgaacctccaagctctactccattgagtgatcccatcaacaataaggttcatttgctcaggacaatgcttcaatgggaggagcaagttcgacgcggagcatcacttgtggagaaaagcctcagtgtaggcacatgtactgaaccaatccttcgtgaggtggccatcatctgctggccgtacgggaagataatgaggatgagcctaggcagcacagccgctgatgctgctagaagaatgggcgttgaagggaagctgctttgggttaatggccaacttgtgttgccccagaccgagctcaaggatggggatatagttgaagtgaggatgtag</cdnaseq>

Protein Sequence

<aaseq>MTPSPAASTSASDAGMLGRRVVMLPSAAAALGLRRGRARMRLGC VLEHVAPRLAVASAALLGAGEVIAAAAAAGKSGGAGHAAVASTLAQLTVTAVAIASGA CLSTKVDFLWPRIEQLPDTLIFEGVEVTGYPIFEDPKVQKAIVFASTAHIGQFRKTGD PYVTHCIHTGKILAALVPSTGERAINTVVAGILHDVIDDTAENLKSIEEQFGDDVASL VSGVSKLSYINQVMHMLEKTLLSADYCAGIDKKTPVEALLLQKKYVLFYASKYFSYAL PIRKAEAVAQETLAVWCSLASRLGVWALKAELEDLCFAVLQPHVFKKMRSELTTMWNS TNKTKSTRRSSIRSGLPASTKDVHTTSVHDFFSLSNQEKPNMKDLLQAVLPFDLLLDR KRRSYFLNNLHGSSETSVPKPKIVDDAAVALASLAACEEELEQELLISTSYIPGMEVT LSSRLKSLYSMYCKMKRKHVGIKQIYDARALRVIIGDKNGALHGPAVKNCYSVLDIVN RLWTPIDGEFDDYIINPKGSGYQSLHTAVQASDNSPLEVQIRTQRMHEYAEYGLAAHW LYKESKVDYRSGTSNKIGQSTSYPSSSSEDENYIQDVMPSKYSSMKMGHPVLRIEGSQ LLAAVIVSIDKGGKELLVAVSFGLEASEAVAERRSCFQLKRWETYARVYKKVSEKWWC APGHGDWSTNLEKYTLCQDGIFHKQDQFGRLLPTFIQLIDLTEEEEEEYWMVVSAIFE GKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASLVEKS LSVGTCTEPILREVAIICWPYGKIMRMSLGSTAADAARRMGVEGKLLWVNGQLVLPQT ELKDGDIVEVRM</aaseq>

Gene Sequence

<dnaseqindica>1..358#848..906#999..1130#1220..1398#1821..1902#2449..2589#3234..3413#3645..3838#3955..4021#4201..4334#4631..4697#4989..5051#5456..5694#5784..5913#5992..6084#6334..6537#6724..7008#atgacgccatcgccggcggcgtccacgtccgcctctgacgccgggatgctcggccggcgcgtggtgatgctcccgtcggcggcggcggcgctggggctgcgccggggccgggcgcggatgcggctggggtgcgtgctcgagcacgtggccccgcggctcgcggtggcgtcggccgcgctcctgggggccggggaggtcatcgccgcggccgccgcggcggggaaaagcggcggggccgggcacgccgccgtggcgtcgacgctcgcgcagcttacggtcacggccgtggcgatcgcctcgggggcgtgcctgtcgaccaaggtcgacttcctctggcctcgcatcgagcaactgcccggtagctccctccctctccctctccccgtggtcgcttgtttgtgcatttgggtatttcattggagggttaactgctgaaacaattgtttatctaattatcttctaaatatgattaagtgtcatgtgagcatagctatgtgcttgagtgcttctatctcataaatgttatagtcgataagctcttaatctccttttaaagtgtataaatttgttatgtctttatttttcttagtaggaagtattttgttggattgtataaattgttatgtctttatttttcttagtaggaagtattatgttcacatgtaagattaattgtggttagcaaacaagagaaatatagaatgtagaagaataacctggtttttttattactgcttagttaattttttttcctggctttctggagtaagccaactatgctcccatttaagtaagattaacatccatttcttccctccctcatatttgttatcttgtatccacgcagacactcttatatttgaaggagtagaggtgactggatatccaatatttgaggacccaaaggtgttaaacaaatgatacattttcaataagcatttcttcagctgaatgttttcattttcgctctccagtttgattttctcaatgttatacaggtgcagaaagcaattgtttttgcaagtactgcccacattgggcaatttaggaaaacaggagatccatatgtcacacactgtatacatactgggaaaatcttagctgccttggtcccgtcaactggagaaagggtattactttccttgcgttctgtttattctttctagttgattattgcttttgttctggcttccccaacccaccattgcgtctcatgtaggcaatcaatacagttgttgctggtattcttcatgatgttattgatgatacagctgagaacttgaagagcatagaagagcagtttggagatgatgttgctagtttggtatctggtgtttcaaagctaagctacataaatcaggtgatgcatatgttagaaaaaaccctgttgagtgctgagtgcggacattgatttagaagggctagctgacttggcactatagttttaggatgcaatatattatggttgagagatgtgctgctcaagttcaacatgaatacatgatgttgcaacaacttgacagtcattgcaaacagccaaacatattctattaggttaaagcaacgattttgcatattgccaccactttgatagttcaaattgcaattaattttctctgtatatgctgaatcatgccaattttcaatctattgccttcagatgtctgaatgcagatctgtgtatacttctgggataatttagctcatgatatcctgttgtcgtatcaatcattaatgaattgtagatgctctcatggcagttatactttcttacactcaacattgtcattctgtttagtgttattgtctgtgcattgcagctactgcgcaggcatcgacaaaaaaacaccggtggaagcactcttacttcagaagaagtatgttctcttctatgctagcaaggtcatattgtgctaaagatgtcatgtcttcactcttttccgattatttgcaaatgagttccaaacatttattggcatgtatttgataatttcagattccatagaaggcatatactaatgttttcagaaaaccatggaattgattatcctcctgttgtcagtcaggcaaacaatctgcgtggcatgttattggggatggttgacgatccgcgtgtggtgctcatcaagctggctgatcgcttgcacaatatgcgaaccatgtatgtcattctaggcttctcaatactgtgtagtttgctctgctgattttattctttgcagccccagtcacttataaactatcctactctggtttatgacattttcattgactgtgttttcccttcaatttggcaacagccatttgaatcatctaggtgcattgacatcataagacagtccacctcaatatgaaccaacatgttctattattggaatgctcctttaacttcatggtgatttcaaatagttgctatactatgtatattttgtatcttactgaaagcagtatttcagctatgctcttcccattcgcaaagctgaagctgttgctcaagagacattggctgtctggtgctcacttgcttctcgattgggtgtctgggctttgaaagctgagctagaagatttatgctttgctgtccttcaggtttttattctggaatttattgtctatgaaagtgttattccttgctcaatacaacactactcatgtattcttctttgtcgacagcaagatgaacattataaattgtcctcatactttgatatttttgttgaatatggcgcttgtatatctttgtttttattggattagcgattacctgatggctttatgtctcgtcattgttatgttattataccttttttctgattccagggaaactctgtaatttattatggttaataatacgacatttcctaatctaaaattatcatgtatgttttttttttcaaacatattgatttgatttgagtagtaattctgcggtgcacaagttggtctgagtaaccagatcttttgcatggttgggtaatttatgtattatataactttaataaggagttgggttgacatctcaatgttttagaaggtttacattttctcatccaatataatctttagttgtacattaattgaattgattttttatgttaggcatacagatatataatattgttttgttcctcttcatcttgttggctgtgtgtcaattttgtggccccaaccattttatcttttggttttataagtttccttcctgattcggtctcactgtcaaatgcacacagccccacgttttcaagaaaatgcgatctgaacttactacaatgtggaattcaaccaacaaaactaaaagcacaagaaggtcatcaataagaagtggactacctgcctcaacaaaggatgtgcatacaacttccgtccatgattttttcagtctgagtaaccaagaaaaaccaaacatgaaggtgagtattgtaagatgcacatgtttgggtcttagtgaatcacacatattgaattgatgtgagttgacttacatggaattttgcaatgttttttcatttattctgcacttgtgcttcccacatgcgtctgcctctttcataaacatacatgaacaaaggcaatcaagcctacctgggagccaggtgatcacttgtgataaatatcttgttattttggttttttacctgcaggacttattgcaagctgtattgccatttgacctccttttggatcggaaaagacgatcctacttcctaaataatctccatggcagttctgaaacatctgtaccaaagcctaagattgttgatgacgctgctgttgcattagcatctttagcagcttgtgaggaagaacttgaacaagaattacttatatcgacatcgtaagttcagaccaatcttagtacttttcagaaggaatttgtctcttgttgtgtacatatgtcaaatctactagtagcattgagattctcatcctcgaattatgtgatttcttcaggtatatacctgggatggaagtaactttgtcaagtagactcaagagcttgtatagcatgtactgtaaggtaataataccacactaccatatgcacattggtgtatgatttgtttttttaagttcacgtgccatctattatgatcatacaatcgagaacttatgttggcctaatcataaggaattttcttatgtaactgcattccaaatgttggtttgcttatttgcttacatgttctataccaacagatgaaaaggaaacatgtaggcattaaacaaatctatgatgctcgtgcattgagggtgatcattggagacaaaaacggtgcattgcatggacctgctgtcaagaattgctacagcgtccttgatatagtaaacaggtttgtagcgaatcaagtatttaacaagaagtatttatgtcagcaaggaccaggcgcataggcattctaagaatttactacttttgcaaataaatgcttcattttatgtatcaattaggaccagtttatatccgtatttttacatgaaaaacattcttcttggcattttttcccacttttttctaagatccatgtttgagtctagaatttgctgaatagcacttgttccaatcaagaacttttagctatatctgattataacctttgcaaactgtctgctttatccatatatgcaggctatggactccaattgatggggagtttgatgactacattatcaaccctaagggtagtggttaccaagtaagaatcatctggcaccaaataaaatataacacgcattgataatttgaggcagtattcccagcaacctattgccagtataaatatattaggacgaaattgtccaacacttcctgcattcccaagtttgttcttccttgttatagatgcccaagcaaatatgactagctgtgcacctgtaccgtcaactatctagatttgaatcttgattttcttatccattactagatgttgcacagacttattttgtctctcttcgcttgcttatctgctggttgttttcctttctagtcactccatacggcagttcaggcatcggataactcaccactggaggtccaaataaggacccaggtagattttttgttcccgttcttccctttttttttttgaatagatctttaatactccctacattccaaattgatttacatatttgataggtacaccaagaccaagaaaagctaataattctctcatactatatttactctagcaacaaactcaatgtatgcaccatccccaatatttcctagccaataacaaatcaagatattgcatgtgggttataaatacttgtgtgcatagatgcatgcatcaatatccatttactccaatgcacaaataacgaatagactctaataaatgaacacaaatatgtagatcatttaggaataacctcaaaaaaactatatgtagatcaatttggaatggagggagtagtttgacttgatcctgatggagatgtttgttcgcagcgaatgcatgaatatgcagaatatggactcgctgctcactggctgtataaggagagcaaagttgactacagaagtggcacgagtaacaagataggacaaagtacatcgtacccatcaagttcttcggaagatgaaaactacatacaagatgttatgccctcaaagtacagttctatgaaaatggggcatccagtcctaagaattgagggcagccagttactggcagctgtcattgtcaggtatagcatgaatcaaaaaatgaactttgttgtttacccagaaagcttgctattgcaattgacacctgattatgttagttgatttgcagtatagataaagggggaaaagagttgcttgttgctgtcagttttggccttgaagcttctgaagctgtagctgaacgaagatcttgcttccagttgaaacgctgggaaacttatgctagagtttacaaaaaggtcaagctgataattttttttggtgatgggcactccttatgagaaaatgcttctatctaatattcaagcttatttcaggtttcagagaaatggtggtgtgcaccaggacatggtgactggtcaacaaacctggagaagtatacattgtgccaggatgggatattccataaggtttgcaagtgctgaaacattattatcttttgttcattacctcactttgtttgtttgcttccctttgtgtgttttcttctggtcttggtttgagtttcttgtgtttgaatagcattgaacttttgtatggggaactggttgtgcatgtgaatgtgtatgaattgaactgaaagttggagtggtgtaggatcaataagttctgttcatggggtttgattatgtcctgtatttgaataatgtgttttgcagcaagaccaatttgggaggcttttgcctacttttattcaacttattgatttgacggaagaggaagaggaagaatattggatggttgtatcagccatatttgagggtaaagaggcctcatctctgactcccgattcaagcaacactgaacgatcgacatctgaacctccaagctctactccattgagtgatcccatcaacaataaggtggacatattctggctatatctcatgtttattctgttttgtatagtccattaagaagatgttatagttctcttgttagtttgttactgcacgatacggatcagaacatacacccggattctcgaaatcagatagaaagcaacataatatgctcaatcctcaccgtttattcattatgccctgtaggttcatttgctcaggacaatgcttcaatgggaggagcaagttcgacgcggagcatcacttgtggagaaaagcctcagtgtaggcacatgtactgaaccaatccttcgtgaggtggccatcatctgctggccgtacgggaagataatgaggatgagcctaggcagcacagccgctgatgctgctagaagaatgggcgttgaagggaagctgctttgggttaatggccaacttgtgttgccccagaccgagctcaaggatggggatatagttgaagtgaggatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0699400, RefSeq:Os02g0699400