Os02g0699700

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Revision as of 02:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0699700| Description = Similar to DNA topoisomerase II| Version = NM_001054368.1 GI:115448106 GeneID:4330426| Length = 4613 bp| Definition...")
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Gene Name

Os02g0699700

Description

Similar to DNA topoisomerase II

Version

NM_001054368.1 GI:115448106 GeneID:4330426

Length

4613 bp

Definition

Oryza sativa Japonica Group Os02g0699700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29666835..29671447

Sequence Coding Region

29666835..29667048,29667153..29667321,29667412..29667545,29667659..29667814,29667902..29668087
,29668166..29668330,29668442..29668558,29668731..29668844,29668921..29669130
,29669218..29669417,29669503..29669773,29669849..29669915,29670012..29670310
,29670793..29671359

Expression

GEO Profiles:Os02g0699700

Genome Context

<gbrowseImage1> name=NC_008395:29666835..29671447 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29666835..29671447 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgccgcgaggctcccgctccagtcgagctccggccacaacgccgccgcgggtgggggcggcggcaagaccatcgaggagatgtaccagaagaagacgcagctggagcacatcctcctgcggccggacacctacatcggctcggtggagaagcacaccgcgcagctctgggtgtacgaggacggcgccatggtgagccgcagcgtcacctacgtccccggcctctacaagatcttcgacgagatactcgtcaacgccgccgacaacaagcagcgcgacccctccatggactccctccgcgtcgagatcgacgccgacgagggccgcatctccgtctacaacaacggcgacggcatccccgtcgagatccaccaggaggagggcgtttacgtgccggagatgatattcggccacctcctcaccagtagcaattacgacgacaacgtgaagaagaccaccggcggaaggaatggttatggcgccaagctcaccaacatcttctcgacggagttcgtgattgagaccgccgatggacgtcggcagaagaagtacaagcaggttttctctgaaaacatgggaaagaagtctgaaccccagattaccaagtgcaaacaaggagagaactggaccagagtcacgttcaagcctgaccttgccaaattcaacatgacccatcttgaaaatgatgttgtagccctcatgaggaagagagtggttgatatggcaggcactcttggcaaaactgtgaaggttgagttggatcatcaaaaggtgcctgtacatagcttctctgattatgtgaaactgtatatcaagtctgcttccaaggacagagacgatgtcaatgaactcccaagtatttcacagaaagtaaatgatcggtgggaggtgtgtgtgagtcttagcgaagggcagtttcagcaggttagctttgtaaatagaattgcaaccataaaaggcggcactcatgtggactatgtcactaaccaaattgccacccatgtgatgaacattgttaataagaggaacaagaatgctcacatgaaagcacataatgtcaagagccatttatgggtctttgttaatgcactcattgacaacccagcttttgattcacaaaccaaagagaccttgactactcgtcaggcaagctttggatcaaagtgtgaactttctgatgatttccttaagaaggttggtagctcagctattgtcctcaatctcctttcttgggctgagttcaaactaagcaaggagctacagaagactgatggaagcaagcgatcaagacttaccggcatccccaagcttgaggatgcaaacggtgctggtgggaaggattctaataactgcacattaatcctgactgaaggagattcggctaaggctctagctatggctggtatttctgtggtaggaagagattactatggtgtgtttcctctcaggggaaaattattaaatgtgagagaagcaagtcataagcagatcatggagaatgcagagatccagaatataaagcaaatccttgggttgcaacacgggaagcagtatgatagcacaaaaggcttgagatatggccatctcatgataatgacagatcaggaccatgatggttcccacatcaaaggcctgttgatcaacttcattcactccttctggccttctcttattaaaattccttctttcttggttgagtttattactcctattatcaaggccaccaacaaaagggacaaaaagattgtcctgccattttactcaatgcctgagtacgaacaatggaaagagagccttggaggaaatgcaagtggttggtctataaagtactacaagggacttggaacaagcacttcctctgagggtcggcagtacttccaggatattgccaagcacaagaaggattttgtctggaagaatgaccaagatgacaacgatattgaattggcattcagcaagaaaagaattactgataggaaagagtggcttactaactttcagtctggaacccatcttgataccgaaggtaagtacatcaagtacagtgacttcatcaacaaggaactgatacaattctcgatggcggatctgctgcgctcaataccttcaatggtcgatggccttaaaccaggccagaggaagattttgttttgctcgttcaagaggaacttagttaaggaaattaaggtggcacagttttccggttatgtatcagaacactctgcgtaccaccatggtgagcagagtttagctagtaccattactggaatggctcaagattttgttggcagcaataacataaacctcttgcagcccaatggtcaatttggcaccagagatcagggaggcaaagatgctgctagtgctaggtacatcttcaccctgttgtcgcctatcactcgttcaattttccctaaggatgacgatattcttcttaactacttggatgaagatggacagtcaattgaacccacctggtatgtgccaatcctgcccatggttttggtaaatggaagtgaaggcattggcactggatggagcacctttatcccaaactataatccaagagatattgttgctaatctaagacggttgctaaatgatgagcctgttgaaccaatggacccatggtatagggggttcaagggctctattcagaagacaggcacaaaagcgggtggtgtcagctatactgtcactggtattattgaggttgttgatgacactacgctgagaattactgagctaccaatccgtcgctggtctcaggattacaaagagtttttaatatctattggtggaaccgacaagagcaaggacaaagacaaggataagggcaagggcaagggtaaggtcaagg</cdnaseq>

Protein Sequence

<aaseq>MAAAAARLPLQSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLR PDTYIGSVEKHTAQLWVYEDGAMVSRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSL RVEIDADEGRISVYNNGDGIPVEIHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRN GYGAKLTNIFSTEFVIETADGRRQKKYKQVFSENMGKKSEPQITKCKQGENWTRVTFK PDLAKFNMTHLENDVVALMRKRVVDMAGTLGKTVKVELDHQKVPVHSFSDYVKLYIKS ASKDRDDVNELPSISQKVNDRWEVCVSLSEGQFQQVSFVNRIATIKGGTHVDYVTNQI ATHVMNIVNKRNKNAHMKAHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQASFGSKC ELSDDFLKKVGSSAIVLNLLSWAEFKLSKELQKTDGSKRSRLTGIPKLEDANGAGGKD SNNCTLILTEGDSAKALAMAGISVVGRDYYGVFPLRGKLLNVREASHKQIMENAEIQN IKQILGLQHGKQYDSTKGLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLIKIPSF LVEFITPIIKATNKRDKKIVLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSE GRQYFQDIAKHKKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHLDTEGKYI KYSDFINKELIQFSMADLLRSIPSMVDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYV SEHSAYHHGEQSLASTITGMAQDFVGSNNINLLQPNGQFGTRDQGGKDAASARYIFTL LSPITRSIFPKDDDILLNYLDEDGQSIEPTWYVPILPMVLVNGSEGIGTGWSTFIPNY NPRDIVANLRRLLNDEPVEPMDPWYRGFKGSIQKTGTKAGGVSYTVTGIIEVVDDTTL RITELPIRRWSQDYKEFLISIGGTDKSKDKDKDKGKGKGKVK</aaseq>

Gene Sequence

<dnaseqindica>4400..4613#4127..4295#3903..4036#3634..3789#3361..3546#3118..3282#2890..3006#2604..2717#2318..2527#2031..2230#1675..1945#1533..1599#1138..1436#89..655#attctaaatccatccagatccccaattccccaatccgccatttccaccacccaaaccctagcggcgcacacaacctctgtgtgtcgccatggcggccgccgccgcgaggctcccgctccagtcgagctccggccacaacgccgccgcgggtgggggcggcggcaagaccatcgaggagatgtaccagaagaagacgcagctggagcacatcctcctgcggccggacacctacatcggctcggtggagaagcacaccgcgcagctctgggtgtacgaggacggcgccatggtgagccgcagcgtcacctacgtccccggcctctacaagatcttcgacgagatactcgtcaacgccgccgacaacaagcagcgcgacccctccatggactccctccgcgtcgagatcgacgccgacgagggccgcatctccgtctacaacaacggcgacggcatccccgtcgagatccaccaggaggagggcgtttacgtgccggagatgatattcggccacctcctcaccagtagcaattacgacgacaacgtgaagaagaccaccggcggaaggaatggttatggcgccaagctcaccaacatcttctcgacggagttcgtgattgagaccgccgatggacgtcggcagaagaagtacaagcaggttaaattcatttgttcctccagagtttttttccccttgcgtattttagttagtactgacatctgggggatggattagcttagaaatgaacttctcttaccggatctgtgagatgaatgagatactggaacggtgacccagttaattgcttttcgtattggaatttgagactagaatgttagcagatttgtagttcagcatccatgtaatgtttggttgaacaaaaataatttatagtttttaggggcattcctagtttcttctgtatatcaccatgttgttcagagtttttttttactccagcagttatctgaacatctagagttgaatcagagtttttgggttattttttctaccattgtttaggtttatgatgaacatgataaacaccatttctagatcatgtaataataacatcacagcacacgataaatgcaatattcatagataatttaaatcgtaccattgaattgttggtgcaggttttctctgaaaacatgggaaagaagtctgaaccccagattaccaagtgcaaacaaggagagaactggaccagagtcacgttcaagcctgaccttgccaaattcaacatgacccatcttgaaaatgatgttgtagccctcatgaggaagagagtggttgatatggcaggcactcttggcaaaactgtgaaggttgagttggatcatcaaaaggtgcctgtacatagcttctctgattatgtgaaactgtatatcaagtctgcttccaaggacagagacgatgtcaatgaactcccaaggtttgacagtagtttcttgcaacgcaaaattatttttggatgtccatgctcttatattgtttatttttttcctctttcgcatgtcttccatttcagtatttcacagaaagtaaatgatcggtgggaggtgtgtgtgagtcttagcgaagggcagtttcagcaggtgcgttatgctcctagagtcccttgcaggatatgttttcacacttgcaccttacactttttttttgtgatacaggttagctttgtaaatagaattgcaaccataaaaggcggcactcatgtggactatgtcactaaccaaattgccacccatgtgatgaacattgttaataagaggaacaagaatgctcacatgaaagcacataatgtcaagagccatttatgggtctttgttaatgcactcattgacaacccagcttttgattcacaaaccaaagagaccttgactactcgtcaggcaagctttggatcaaagtgtgaactttctgatgatttccttaagaagggtatgcgatcaatttactgttcttaacatggtttttcaaatgtagttccaccattaatggcgatgttcacttgttacaattgcagttggtagctcagctattgtcctcaatctcctttcttgggctgagttcaaactaagcaaggagctacagaagactgatggaagcaagcgatcaagacttaccggcatccccaagcttgaggatgcaaacggtgctggtgggaaggattctaataactgcacattaatcctgactgaaggagattcggctaaggctctagctgtgagtagtaaaatcccgcataatgccaacaaaggtagtttataagttcagtatcagtgaagagtttccttttttttccttctgcagatggctggtatttctgtggtaggaagagattactatggtgtgtttcctctcaggggaaaattattaaatgtgagagaagcaagtcataagcagatcatggagaatgcagagatccagaatataaagcaaatccttgggttgcaacacgggaagcagtatgatagcacaaaaggcttgagatatggccatctcatgataatgacagatcaggtttttctcatgctaaaatctatttcaactagtctaactcaactcgcttttttgctcatctaatagaaaatttcaggaccatgatggttcccacatcaaaggcctgttgatcaacttcattcactccttctggccttctcttattaaaattccttctttcttggttgagtttattactcctattatcaaggtaggcagctcctaggggttggtatatttcatgcttattttctgtgtttacagcttgtcaaagtatcgtacttaaaattgtcatttgaaggagtcatatccttctgtgggttacatatatttaaagcatgcttggttggacggaataataattcttgaacatatttgcacaggccaccaacaaaagggacaaaaagattgtcctgccattttactcaatgcctgagtacgaacaatggaaagagagccttggaggaaatgcaagtggttggtctataaagtactacaaggtctgttctccctttgatgaatcacatgttgtttgttcggctttctgcacacgattgtatatttttcttgtgttagatgtcatcagctaaggatatcactggtgcctgcagggacttggaacaagcacttcctctgagggtcggcagtacttccaggatattgccaagcacaagaaggattttgtctggaagaatgaccaagatgacaacgatattgaattggcattcagcaagaaaagaattactgataggaaagagtggcttactaactttcaggtttgctcttgcatccttttccatattacaaaacctaattactattctgtagcaactaatatataatcaaaatttcagtctggaacccatcttgataccgaaggtaagtacatcaagtacagtgacttcatcaacaaggaactgatacaattctcgatggcggatctgctgcgctcaataccttcaatggtcgatggccttaaaccaggccagaggaagattttgttttgctcgttcaagaggaacttagttaaggaaattaaggttgtgccattggaagttttttgaaacttttttatttgagatgataaaatatacttaaactgacactgttaattctattcaccacaggtggcacagttttccggttatgtatcagaacactctgcgtaccaccatggtgagcagagtttagctagtaccattactggaatggctcaagattttgttggcagcaataacataaacctcttgcagcccaatggtcaatttggcaccagagatcaggtgtgacaacggtgtaaagggattttactttacggtgctgttttgtggggtcgctattttgttagcttgtaaactaatcttctcatgactgtgcttgtttgtattcatttcagggaggcaaagatgctgctagtgctaggtacatcttcaccctgttgtcgcctatcactcgttcaattttccctaaggatgacgatattcttcttaactacttggatgaagatggacagtcaattgaacccacctggtaatatcagctgttggagccttctttctccagaatactatttaaagatagtttgatataagtacataacacatgcctactttccttcaggtatgtgccaatcctgcccatggttttggtaaatggaagtgaaggcattggcactggatggagcacctttatcccaaactataatccaagagatattgttgctaatctaagacggttgctaaatgatgagcctgttgaaccaatggacccatggtatagggggttcaaggtcagtaatatgcgttgactgagagtactgttacactagcagcgtatatccctattttaaactaatgattgcatttgggcaacttctgttttcatgaacaacagggctctattcagaagacaggcacaaaagcgggtggtgtcagctatactgtcactggtattattgaggttgttgatgacactacgctgagaattactgagctaccaatccgtcgctggtctcaggattacaaagagtttttaatatctattggtggaaccgacaagagcaaggacaaagacaaggataagggcaagggcaagggtaaggtcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0699700, RefSeq:Os02g0699700