Os02g0700000

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Revision as of 02:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0700000| Description = PWWP domain containing protein| Version = NM_001054371.1 GI:115448112 GeneID:4330429| Length = 5101 bp| Definition ...")
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Gene Name

Os02g0700000

Description

PWWP domain containing protein

Version

NM_001054371.1 GI:115448112 GeneID:4330429

Length

5101 bp

Definition

Oryza sativa Japonica Group Os02g0700000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29682444..29687544

Sequence Coding Region

29683122..29684482,29685117..29685803,29685922..29686142,29686904..29687118

Expression

GEO Profiles:Os02g0700000

Genome Context

<gbrowseImage1> name=NC_008395:29682444..29687544 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29682444..29687544 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggtgctcggaggggggaggaggagacggggaggtggcctgctgcggcgttggggatacctcgccggggaccattgtgtgggtgcggcggaggaacgggtcatggtggcccggcaggattctggggcccgacgagctgccgccgtcgcagatcatgtcgccaaggtccggcacgccggtcaagcttctcggccgtgaggatgccagtgtcgactggtacaacattgaaaaatcaaagcgcgtcaaagcatttaggtgtggggagtttgatgcatgtattgagaaggcagaggctactgaagggacttctgttaagaaaagagagaagtatgcacgtagagaagatgctattcttcatgctcttgaattggagaagaagctgcttgcatcaaagcatcagactcaaggttccagacctgctaacgtttctgtttgctctaaacataacaaagatcttggaagtacccgctacaagagcaaaaagagtaagaaacggaagggcataactgcttcttctgatataaaaaaggaagctgagcaatatgtcctccatgctggctcaaagagaaactttcaagattctcctactcggggcatttctgataatctttttggcaatcacttgggagacatctcgcatgtgaggcatatacaggccggagaaaatttggatagcaaggagaaaatcacaactgcggaaaagattagatcagatggaagtgattttgatgaatctattgaaaaatgtgacagacgccaacctctggttcagattttgcacagcagtccaaaattgcctcatcagtcacagcacaatgatggctatggggatgtcctaactcagggagaaatggatcgatcacctgccaattaccgagctaaaagaagtagatatgtattcctacctactgattctggtgaaactcatagtcatagtgatttaccttccgtacaagtggcttctacaggaggtgattttgagactgaaagttatcttcatcatcctgctttttctgaggagcagacatcttctgatcttgttgagaagcacatatatgagtcttcagagagggaatgctctgagagtgagacagaagatgacgctgaacttttacaatgttcggatttgattctgcatccagcatcacatgcccatgatccttatttcttaccagcttctgacaagttcaggcatgcgaatattgatgctgatgctgatgagctgacctattcttcttatatgtgtcaagtgaatgaatcagaagaggatggctcttctgagttgggcgtctcccaatggcatatgaaaggtaaacgtaatagccgtaatgcacctaagagatcggatatggcagatggaaatccctggttagacaaatcagatggtttcatggaaggatctccgtataaaataaatggtagaaatcccagagaagggagtatgcaaattcccaatcagcaattgctggggcaaaatttttaccaaaacgaagaggtcaattacgattccgaagaaacagatttttttgaggacacaggtcattcagaggttaacttgtaccatggtagaacatattcttcatgtttgaaggctacaagagattttagccgaagctacagctattttaacgactatggaaatgattcttccaaggtttctcccctaaacagggattcagataagatatttcattttgatcggaatgcatattggagcggaccctcattctaccaaaagtacagttcacgtcttcgtggcaggggcccaatgttgtttgatgttgacttgaaggtccaggctagctaccagggagagcatgttcctcttgtttccttaatgagcagactgaatggcaaagcaattgttgggcatcctgttcaaattgaaatacttgaagatggttccactgaccacctggttttttgtggtgatgttagtttggaagggagaactggagggcaacctgcttggtgtacaggcaggaggactgccatgcaaagaattccccgatctaacccctcaggggcattggattgtgatgatgaaggtacccttgcatatccagactgggagatgaaaccagattttagaaagtactcaaattcagattttagaaagtactcaaattcaaatcatcaggttaaggttgataagaaaagcatctcaaatgttaggaggccgtcagcctctaaatctcaaaagaagcaatccaaaaaagcaagcctgtcaagccagaaggtccgaaccctctcttccatttccactggaaaaaagcatcatggagtaggtggtcaagcaaaagcacataagcagagtggcatttttggcggcttgatcaaaccagggggaattccacttgtcacatgtgtccctgcgaaggttgcctttactaggatactggaagctgttggcaggccgcccctggctgttgctcaccgtgttagaatggctagtcctgccttgcgagatccttcatag</cdnaseq>

Protein Sequence

<aaseq>MAGCSEGGGGDGEVACCGVGDTSPGTIVWVRRRNGSWWPGRILG PDELPPSQIMSPRSGTPVKLLGREDASVDWYNIEKSKRVKAFRCGEFDACIEKAEATE GTSVKKREKYARREDAILHALELEKKLLASKHQTQGSRPANVSVCSKHNKDLGSTRYK SKKSKKRKGITASSDIKKEAEQYVLHAGSKRNFQDSPTRGISDNLFGNHLGDISHVRH IQAGENLDSKEKITTAEKIRSDGSDFDESIEKCDRRQPLVQILHSSPKLPHQSQHNDG YGDVLTQGEMDRSPANYRAKRSRYVFLPTDSGETHSHSDLPSVQVASTGGDFETESYL HHPAFSEEQTSSDLVEKHIYESSERECSESETEDDAELLQCSDLILHPASHAHDPYFL PASDKFRHANIDADADELTYSSYMCQVNESEEDGSSELGVSQWHMKGKRNSRNAPKRS DMADGNPWLDKSDGFMEGSPYKINGRNPREGSMQIPNQQLLGQNFYQNEEVNYDSEET DFFEDTGHSEVNLYHGRTYSSCLKATRDFSRSYSYFNDYGNDSSKVSPLNRDSDKIFH FDRNAYWSGPSFYQKYSSRLRGRGPMLFDVDLKVQASYQGEHVPLVSLMSRLNGKAIV GHPVQIEILEDGSTDHLVFCGDVSLEGRTGGQPAWCTGRRTAMQRIPRSNPSGALDCD DEGTLAYPDWEMKPDFRKYSNSDFRKYSNSNHQVKVDKKSISNVRRPSASKSQKKQSK KASLSSQKVRTLSSISTGKKHHGVGGQAKAHKQSGIFGGLIKPGGIPLVTCVPAKVAF TRILEAVGRPPLAVAHRVRMASPALRDPS</aaseq>

Gene Sequence

<dnaseqindica>3063..4423#1742..2428#1403..1623#427..641#aatccttttatttgccctttaatttcccacccttttctgtcgtagaaagaggagggaaaaaaatattccggcgaccgcctcggcggcagcgaaccagcggcgccgccggaggggccctgcctcgcggaggtggaggaggaggaggagaaggagggggaaggggggtgaggaggcggcggcggcggctctccttgggatcctcgctgagaagcttctagaagctgccggggggggggggcgctgagcgagcgcgaggggcagggcgatctagcgagcgcggaggagagggcttctagatgcaggcgccctccgtgatttgaatggagggtagatctcgagagggagggaagcttctagaagcggggtgaggcaaggcgaggcgaggcgaggcggcggttagggcttggtttggtggccgggggagggatggcggggtgctcggaggggggaggaggagacggggaggtggcctgctgcggcgttggggatacctcgccggggaccattgtgtgggtgcggcggaggaacgggtcatggtggcccggcaggattctggggcccgacgagctgccgccgtcgcagatcatgtcgccaaggtccggcacgccggtcaagcttctcggccgtgaggatgccagtgtgtgagttctgattcccttattttccatctgtttccaagtttctacttctgttgctgatggctaggtaatttttttggttagttgctgcctctagtgcatttgagatgctatgcaattttcctgttcagtaatttagttgtttgaaacttggacggaagaaggcgagaggcaatctgtgtatagctgtgtgcataaaatggtctatttttgtagtttagctccatgtcagttttttttaatgtgcctcgatgtttaaattctgagaaaaaagaaaaagaacttatatctgtaatgtataataatataaaatgtgtagtgaaatttctgcaactgataacctgcaaactgttccttgtaaaaaaaaaacaataagctaaacatgtgttttcatggtattcagtgtgaccatgtttggtcttgaagaactgaaaataaactaggaggattataagattgcttccttattcctgaggttgctatacagttgctatgttcagcattttggttctgtagagaaatttgcatgtttgctatgtggaaaccaaacagatggtggttctttgggaaataactttgactttatgtaaattggtgaaatgtttgccttgccttttagaaatcattctgattctattttacctgcactattttctcatgaattaatagtcacactatgcatttatattgtttgtttggttacatgattgcctatgtatattttgaattctgaaacttatgtacttgtcttttcttatccatagcgactggtacaacattgaaaaatcaaagcgcgtcaaagcatttaggtgtggggagtttgatgcatgtattgagaaggcagaggctactgaagggacttctgttaagaaaagagagaagtatgcacgtagagaagatgctattcttcatgctcttgaattggagaagaagctgcttgcatcaaagcatcagactcaaggttccagacctgctaacgtttctggtaagcccatttattggcaaagtttgatttagcttccttcattgttgactaaattgtttgcatgatcttcaagggagtatgttggatataaaacctcaattatctttgtgaaatgcagtttgctctaaacataacaaagatcttggaagtacccgctacaagagcaaaaagagtaagaaacggaagggcataactgcttcttctgatataaaaaaggaagctgagcaatatgtcctccatgctggctcaaagagaaactttcaagattctcctactcggggcatttctgataatctttttggcaatcacttgggagacatctcgcatgtgaggcatatacaggccggagaaaatttggatagcaaggagaaaatcacaactgcggaaaagattagatcagatggaagtgattttgatgaatctattgaaaaatgtgacagacgccaacctctggttcagattttgcacagcagtccaaaattgcctcatcagtcacagcacaatgatggctatggggatgtcctaactcagggagaaatggatcgatcacctgccaattaccgagctaaaagaagtagatatgtattcctacctactgattctggtgaaactcatagtcatagtgatttaccttccgtacaagtggcttctacaggaggtgattttgagactgaaagttatcttcatcatcctgctttttctgaggagcagacatcttctgatcttgttgagaagcacatatatgagtcttcagagagggaatgctctgagagtgagacagaagatgacgctgaacttttacaatgtatgtgttcacaccatgctaatacttctttcaatttttacttgtacacacgtgggttcacattgcgaaaaatgttaccatattattgttgttgcataaggttcaaacaatttatatcttacagtatagcatcaaagtaatcaaatatgctcactcttgatttgttttttaggtgcccaaacatttctggaccctttttttttaaaaagttttgaaccgacaatgactcaaacaatatgtaggttgtgagacaacaaaacaacaccgtttgggtttaaccaaacttactttgttgtgaagttttagttgtgtacagtatattataagacagattagcagccattctattattctgaacttatatgacaataaggacttatctgagcttatgttggttatgtacaatgaatcctgccaaatttggaatcgaggtgtgacctggtccaagaaaaaggagatagccaaatgatttagataatccctcaaattatcttaagtgtacctttgtttttgtttctgtttagctctagctaagctttcatcagttctgtctatggtttcatggctatgctcttgttttattttgagtttgggattttggcttgtttgatcactgtggtgatcttttgggcaggttcggatttgattctgcatccagcatcacatgcccatgatccttatttcttaccagcttctgacaagttcaggcatgcgaatattgatgctgatgctgatgagctgacctattcttcttatatgtgtcaagtgaatgaatcagaagaggatggctcttctgagttgggcgtctcccaatggcatatgaaaggtaaacgtaatagccgtaatgcacctaagagatcggatatggcagatggaaatccctggttagacaaatcagatggtttcatggaaggatctccgtataaaataaatggtagaaatcccagagaagggagtatgcaaattcccaatcagcaattgctggggcaaaatttttaccaaaacgaagaggtcaattacgattccgaagaaacagatttttttgaggacacaggtcattcagaggttaacttgtaccatggtagaacatattcttcatgtttgaaggctacaagagattttagccgaagctacagctattttaacgactatggaaatgattcttccaaggtttctcccctaaacagggattcagataagatatttcattttgatcggaatgcatattggagcggaccctcattctaccaaaagtacagttcacgtcttcgtggcaggggcccaatgttgtttgatgttgacttgaaggtccaggctagctaccagggagagcatgttcctcttgtttccttaatgagcagactgaatggcaaagcaattgttgggcatcctgttcaaattgaaatacttgaagatggttccactgaccacctggttttttgtggtgatgttagtttggaagggagaactggagggcaacctgcttggtgtacaggcaggaggactgccatgcaaagaattccccgatctaacccctcaggggcattggattgtgatgatgaaggtacccttgcatatccagactgggagatgaaaccagattttagaaagtactcaaattcagattttagaaagtactcaaattcaaatcatcaggttaaggttgataagaaaagcatctcaaatgttaggaggccgtcagcctctaaatctcaaaagaagcaatccaaaaaagcaagcctgtcaagccagaaggtccgaaccctctcttccatttccactggaaaaaagcatcatggagtaggtggtcaagcaaaagcacataagcagagtggcatttttggcggcttgatcaaaccagggggaattccacttgtcacatgtgtccctgcgaaggttgcctttactaggatactggaagctgttggcaggccgcccctggctgttgctcaccgtgttagaatggctagtcctgccttgcgagatccttcataggcgtcaactgtgatgttaaatgtatctggtgttgatttgctagccttggacctgcaagtttcgtgtacattcccagctaatcgaagatgcgggcttttcagtcatttgggctacagtcagtaaagagcaaatggcatggttacttcaatataacttgggaacagctgataactaattagcagtggtgacatgacatgtaaagatcaacagcacctgtatatttctaactggaggttgagaccctttaggctctcatcacgagtgcttcttggttctcacacagtagttgagccaatgactccatggaggggaaattctttgcagagcaacagtgttggtgactataaaaatggcttttggcatagctgtctcctgtaaagtactaacttcagcattttaggatgtctatttagctaatcttatgcattcatctcatagtcaatagttcatagtttctctgatgtcatgtataatcccctcagttatattcagatttgcctgttatttactgtccaaagaattaatagtttcttcgactgtatgttctgtttataagcatgtgtagcaattcgatgtaatatatcataactattacaccagttgatgttaacaatgtagtttttctctgtatcccgttgatgtcaaaaagcactctgaactgttgcctttcctccttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0700000, RefSeq:Os02g0700000