Os02g0700700

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Revision as of 02:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0700700| Description = contains InterPro domain(s): IPR013591| Version = NM_001054377.1 GI:115448124 GeneID:4330435| Length = 6894 bp| Def...")
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Gene Name

Os02g0700700

Description

contains InterPro domain(s): IPR013591

Version

NM_001054377.1 GI:115448124 GeneID:4330435

Length

6894 bp

Definition

Oryza sativa Japonica Group Os02g0700700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29713600..29720493

Sequence Coding Region

29713909..29713987,29714118..29714557,29714630..29714771,29714864..29715339,29717797..29717895

Expression

GEO Profiles:Os02g0700700

Genome Context

<gbrowseImage1> name=NC_008395:29713600..29720493 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29713600..29720493 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgcgtgcatcgcgtgttcgaccaaggacggcggggagggcgggcaccggtccgccaccgccacgcccaactccggcaagtctctgacttcacagttgaaggacatggtgctcaagttctccggcagcggcaggcaccaatacaagtccggcgggagcccgtcgttgaggaccagccgcttccaccgctccagccgcctcgccgcgtacccgggcatcatcgacgagtcgggcttcacgtcggacggggccggcgaggcctatacttacatgaggacgacgacggcgagcgccggcgcccgggccgcgccgtcgacgtgggacttgccgcccaaggtgaaccaccgcagcttccagccgcgcgtgatcaggagcccgagcgcgagcggggtaccgagcatcggggaggaagactacgacgacgacgacgacgacgatgacgaggagacagtcctcctggaggaggaccgcgtgccgcgggagtggacggcgcaggtggagcccggcgtgcagatcaccttcgtctccatccccggcggcgccggcaacgatctgaagcgcatccgtttcagccgggagatgtttaacaagtgggaggcgcagcggtggtggggggagaactacgaccgcgtggtggagctctacaacgtgcagacgttcagccggcagcagggcttctcgacgccgacgtcctccgtcgacgaagccatgcagagagattcgttctactcccgcgtcggctcgacgagggagagcccggcgatgatgatgccgccgccgccgccgctgccgtcgtcgggtgctggcagggagcacccgatcagccggacagcgtcgagcaaggcgcagctgtcgtcgtcgtcgtcggtggcggcggctcggccgccgttctacccgtccacggccgtgccggacccgtccgaccacgtgtgggcgcaccacttcaacctcctcaactccgcggccgccggaccagcggcgccgtacgacccgtcgcgcggcacgacgtcgtcccgggacgaggcgtccgtgtccatcagcaacgcgagcgacctggaggccacggagtgggtggagcaggacgagcctggggtgtccatcaccatccgcgagttcggcgacggcacccgcgagctccgccgcgtccggttcagccgcgagagatttggcgaggagcgggccaaggtgtggtgggagcagaaccgggaccggatacacgcgcagtatctgtga</cdnaseq>

Protein Sequence

<aaseq>MLACIACSTKDGGEGGHRSATATPNSGKSLTSQLKDMVLKFSGS GRHQYKSGGSPSLRTSRFHRSSRLAAYPGIIDESGFTSDGAGEAYTYMRTTTASAGAR AAPSTWDLPPKVNHRSFQPRVIRSPSASGVPSIGEEDYDDDDDDDDEETVLLEEDRVP REWTAQVEPGVQITFVSIPGGAGNDLKRIRFSREMFNKWEAQRWWGENYDRVVELYNV QTFSRQQGFSTPTSSVDEAMQRDSFYSRVGSTRESPAMMMPPPPPLPSSGAGREHPIS RTASSKAQLSSSSSVAAARPPFYPSTAVPDPSDHVWAHHFNLLNSAAAGPAAPYDPSR GTTSSRDEASVSISNASDLEATEWVEQDEPGVSITIREFGDGTRELRRVRFSRERFGE ERAKVWWEQNRDRIHAQYL</aaseq>

Gene Sequence

<dnaseqindica>6507..6585#5937..6376#5723..5864#5155..5630#2599..2697#tgctttcgctcgatttcgggggcggatcagacggccgcgagcgaatccggggatctcccccctccctcccgctctgttcctgcctctgctccccgcccgtttcctctcaatccttccttctccctgcttctctccctcgcggaaaaaaaaagaaaagaaaaggaaaagggggagtggaaaagatctcctcttcgtcctgtttctgttggcgtcgctgctcggcagctcgttcgctagctaccacccaaaaggcggcagtcgatcgcctgatagctcagccgctctcctctgtcgcttccgagctcttgtgccgccgcgcgccggcgaggatctgtcgaccgagagaggagccacccgccgtccaagaagaggaggaagaaggtaactgaccagtgactactgctgtttcctttccccttgaatcggagaacgagatctttgccatctctttctctgtttctttttttatggtgtgcatatttggagtagctccgtgtgtcctgtgctctgctctagtgtccatttgctgcgctttcgttttcggaggggggttcatctctgggtccgtttgcgttgtcgatcattgagatctccagccttccattgggtccatttggggaggcaatcccattgcttcccactgttgccttttttttccgtagcgtcgacagcctcttgcagcaatgagtactggcctgtttctttatagagtcaggcttgtcgatttggacagcgaacaatcggctaaatatctgtcctagcagtatttttgcagataaaagtgagcattatgcttttctagtcggccacatgtacattgcgtaatctttatcaccttctcttccctgtcgctgttgttcagatcatctttgcgtcagaaggagcagtgacgagataccactgtccgcgtggtcacaagcattgctgcgagactgtgattggcgggagttgctttggatgagcaatagcctgatggtggcttgctaactggtaagcagtattctcacttgtcgtcatccacacttaactatataatcaatcttatccattggtaattactcctagtaccctttgtagtataacaagcttaaactaaaaacggtagtattacaatagtacaatacacgcgaattttgtaggtgcaagtaggactgttttttagttgggatgttacactgcaagaaggcttctgtttgcctttccatttccttcagtgggtcctccaatccactcccaaccactgataaaatttccatgagggccctggtcctaaaagggcttctctctatccatgcaaatgtgcaatatgtgcatcatccgtctatctatctgcctcctgctcagctcgatcggccgctctccaagcttccaacctttcgcttggaactggacgatgcacttggattcggagtggcagtgtcctcacgtaggagtagataaaagagctcctgctagtacagtttttctcagaaccttctctgctccctcgtgtattatcggcatgcatgccttggttgcctgttgcctgttgctgcagtagcaagcataattaagcctatgcttgttgagtgaatgaatgctctacctacgacgacgtactagctgcacgcctgcacactgagcccaccggtgcagcagcattaagcagtaatatcaatccgtgcatgcatcaatcaatcaatccaccacccgggctatactttgccgcagctacctccctgtacctctcatactacgtactactccataaagcagccaaagcttggggggcattgactccgtttcttgctcgatgcctcgcctacccctagctaagccagagctcaaacatggcagtggtctgcagtgagccggcgcgtgcaaacatgcgttcgggcccaggccggccgcgccaaggcccaagggcatggatatacacacgcgcgggcgtgtgcgccccatggtggcagcgtactcggctggcgaggggttgctgtcggtgtatcgattttaaggaaggcaaaagcctgcggcgcaggccatggcatggcatgcattagctagagcggcgtttactcactggctatggctactcagctcggagttgatgccggccggccggccggctggcactgcagccatggcagtggctgcagtgtaatctgatgtacctgctgctactagaaatgttccgtgtatttactccttgcacacactggatcaatggcactgctacgttgctagtacatgttggattttagccgtgtgagtgcgtgacggctcagttcctcttttgatacaccaggaccagattcttatcttagggtgtgtttgagagagagaggattgggaagattgggaagatacacaaaacgaggtgagtcattagttcatgattaattaaatattaactattttaaactttaaaaatggattaatatgattttttaaagcaacttttctatagaaaatttttttacaaaaaacgcaccgtttagtagtttgaaaagcgcggaaaacgagtgacaatctcctcccttggctcttcgatggactttgtttgtgactgagcagggaaggaggatttgcgcggttctggactactcgagaggctaggaaatgcttgcgtgcatcgcgtgttcgaccaaggacggcggggagggcgggcaccggtccgccaccgccacgcccaactccggcaagtctctgacttcacaggtacatgtgctgatgtgcattcttatactactccagtactccgtacacaagtaaaaatccgtagtactcgcacatgttgtgcactagcgcatgggcggagacctgatgccacattttcttctgttgcattaaccagtcaattgaatgccctctgctgctccttagcagtggggtgctagtacttctagtactacatccgttccaaaatatagctatttctagcacagtactttattttaaaatgaagctatttttctacctatcttttcctctcaaccaatcacaaccattctttttcacctattttctcttttcaaccaatcacacatatttttcaatcattctcatatactttcttaatacccgtgtcagcctcaaaaatgcttacatttgggacggaggagaaagtattacactgtagttgttcttttgtcctagcctgcttgtcgtcaccttgttcttggcctttgaaagggaacagagtaccactacgtacaggaggacaaccaatactagtacacttgtggtgatatacaccgtttctcttttcttttcccttcctcaccgggtgtctaatcagggcaatatcctgcatggaatcacaagtacaaggtgaatgacagtgctctaactacattttaaaacattccttgataaagttggtcaaggactcaaggcccaggggaatatgactagagtttggtgggggagagaaggctcttgcttttttcttgcatggatcccctcaagctttgggttttggactgatttgatatggtcacttctgttcccccatactaccattcccctgcccttttcacttgctccatccatccatccatccattcactttgcttgctcccaacaaaagactgtcctatcctagtagctgctaatgtgatctttccctcctggaaagacactatctggttgattgatcttaacccctgggtcttactcctacggcccgtttggttggagggagtttttagtagggattgggaatttagagggatgaagctattaaaatttttgtttggttgggagacatgggaattttggtgggatgaggatggggaattgaggaaggaactcactccttttcaataactgggtaggggcaggtaattaggagggaattcatcctttactttgtttaaccaaatctcagccatccgtttttattaatgacctaatctccaactaaattccctatcaatttctatcacctctaccaaataagatattgggattaaaaatcaaattcccatcttaatctcatcatcaactccctcgtgtaaactcccaatccccttcgagttatcaaacaagcagctactctcttcagtccaagatgttcctttcccttttcttttcttaagagggacccccccccccccccccccaagacggtcctggacactcagagaagaataaagctgggccgtagccagcccgtaggccatgcacagaaacacacacttgtggtccttgcgatgggctggtttgtttcttaagatgggctctcgctgcgacccatctctgaactactccatgatgacacgcctcgtcactgggactcgagtactctcgtcctttgcttcctgcacgctttcgcctttgccgtcttttaaagtagcagtactagtactacacatatttggagcataagcacgcaccacatgacatgcacctgtgtggctatgtgtgtgtgtgtgtgtggatggaccggatcgattcccttccctctctggtgttattatgatccggggggggggggggggggggggcgctgtccacgatgttgctttgagaaacttgagtggtgtggtgtgggtgtgctttgtctttgctttgttccttgcttgagagttcaggcaaaagatgtcctgggttttaggacattgtgatggttttgttggtgcttttcggtgatgtgtgagcccttctgctaggcgtctacgcgactaatctgggggtcggaagtgcgccctgtcctgcttttgttagccctaatcatcgggatggagatggaatcgatcggtgatcattaaccctgctgtggatatgattggcgctttacttgagagaccgagctgtcgcgtaggatttgattgctgaggcgtgtgcgttagtggtgaatgttgatgccccgaacgaaactcccgcagttttatatactggaaaggcaatggcatgttaaaagttatatgcagccactctgttgccaattgcaagaaattatatttactgaatatgcaaggcaaaaatgttacctcagatatataatatcatctgttgtatgatgatgtcaacttggcattcgttcaaaaaaaaaaaaggatgatgttaacttgactaatggatatttaataaatatttttacaatggaaaatcaattgatcccttattcaggaggataattaattaatctgcacaaatttaatgtggtttcagttgaaggacatggtgctcaagttctccggcagcggcaggcaccaatacaagtccggcgggagcccgtcgttgaggaccagccgcttccaccgctccagccgcctcgccgcgtacccgggcatcatcgacgagtcgggcttcacgtcggacggggccggcgaggcctatacttacatgaggacgacgacggcgagcgccggcgcccgggccgcgccgtcgacgtgggacttgccgcccaaggtgaaccaccgcagcttccagccgcgcgtgatcaggagcccgagcgcgagcggggtaccgagcatcggggaggaagactacgacgacgacgacgacgacgatgacgaggagacagtcctcctggaggaggaccgcgtgccgcgggagtggacggcgcaggtggagcccggcgtgcagatcaccttcgtctccatccccggcggcgccggcaacgatctgaagcgcatccgtttcaggttcgtgccaatcaagcgacatgacatttcgtcgagcacgtggtgctcgagtgatgagcatgagctaacggattgtggcgatgcatatgcagccgggagatgtttaacaagtgggaggcgcagcggtggtggggggagaactacgaccgcgtggtggagctctacaacgtgcagacgttcagccggcagcagggcttctcgacgccgacgtcctccgtcgacgaagccatgcaggtcacttccgttccatcactggttagcaaaagctctgcacattccgttgctgatgatggttgatgtttgcagagagattcgttctactcccgcgtcggctcgacgagggagagcccggcgatgatgatgccgccgccgccgccgctgccgtcgtcgggtgctggcagggagcacccgatcagccggacagcgtcgagcaaggcgcagctgtcgtcgtcgtcgtcggtggcggcggctcggccgccgttctacccgtccacggccgtgccggacccgtccgaccacgtgtgggcgcaccacttcaacctcctcaactccgcggccgccggaccagcggcgccgtacgacccgtcgcgcggcacgacgtcgtcccgggacgaggcgtccgtgtccatcagcaacgcgagcgacctggaggccacggagtgggtggagcaggacgagcctggggtgtccatcaccatccgcgagttcggcgacggcacccgcgagctccgccgcgtccggttcaggcaagccactccacagtccacacacacatcccgaaaacgctaacacgtcaccaataccggcagatcacgctggattttcctcgtgttcgcgtggaatttttaacacttctctctgtgcgcaacgttgcagccgcgagagatttggcgaggagcgggccaaggtgtggtgggagcagaaccgggaccggatacacgcgcagtatctgtgagctaacgcgagacccatcgttgatgagagtgaagtgatactgtgacagaagctaacgcgtcgccgggaagaatagttaagagtgtgatgatactactactttgccgctgctacggttagtgctactaggttttttttacagggtgaatataggatgagggggaaggatgctgtggtctgagaagcagcaggctcagtcaagctgctactcttgttaactgaccactttggtcttccgtttgtaacctttatggacagggtgttcgtttaattcgtttgttttagcatggtttcatgtgatcctcgacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0700700, RefSeq:Os02g0700700