Os10g0438500

From RiceWiki
Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0438500| Description = Cyclin-like F-box domain containing protein| Version = NM_001071216.1 GI:115482175 GeneID:4348714| Length = 3372 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0438500

Description

Cyclin-like F-box domain containing protein

Version

NM_001071216.1 GI:115482175 GeneID:4348714

Length

3372 bp

Definition

Oryza sativa Japonica Group Os10g0438500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16187831..16191202

Sequence Coding Region

16189528..16189866,16189947..16190021,16190477..16190586,16190674..16190938

Expression

GEO Profiles:Os10g0438500

Genome Context

<gbrowseImage1> name=NC_008403:16187831..16191202 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16187831..16191202 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtactggatcagttaccgtgaaacaaaagaagcgagtaaagcacactaagaacaagtacttgaaacctggtgctctcgcccagattcgttatagcaggagcacaagcagggatataggaaagaaaaggattctgttgaatgtggataaggatgagttaccgcaggaggaggttgcattcgaaaacactgaacctatgatgtcgcctaaaaggctcaactttgagccatttagtggaactaaggggcaggtaatgccaataactccaaagactcctcagtcagatgaattatctgatggtcattcaagacttgaatcacttccacttgaattgctgatcaagatcatttgttgcttgcaccatgatcagctgaatattgttttccatgtttcaaaaaggatccggaaggcagttgaattggcgaggcagtaccattttaactacactaccccagatcgaagcagacaggaactactccagcacaccactcctcttccaacagaacattggcctttcatgagcaggattgatggcaaggatgtgcggatttctaccccaagaaccccaaaggctccaaaacatgctcctcggcttgcgcgccttgagctgcttgatttcaagccaatcactgctgttcttttcccagacacatttccttcaaaacgtctgcgccgttcaatgccaccaggattgccaaggcctgtgtccaaagctgcatcctcgactagagttttactgtatgaggaggagctttgcgaagcggtggcacagaataagcttctttga</cdnaseq>

Protein Sequence

<aaseq>MGTGSVTVKQKKRVKHTKNKYLKPGALAQIRYSRSTSRDIGKKR ILLNVDKDELPQEEVAFENTEPMMSPKRLNFEPFSGTKGQVMPITPKTPQSDELSDGH SRLESLPLELLIKIICCLHHDQLNIVFHVSKRIRKAVELARQYHFNYTTPDRSRQELL QHTTPLPTEHWPFMSRIDGKDVRISTPRTPKAPKHAPRLARLELLDFKPITAVLFPDT FPSKRLRRSMPPGLPRPVSKAASSTRVLLYEEELCEAVAQNKLL</aaseq>

Gene Sequence

<dnaseqindica>1698..2036#2117..2191#2647..2756#2844..3108#ctacctcctcaaccagcccactctgctattccatctgcgtgagagagagaaagaggggaggggagagagatttgtggcgtcgtgggtgctcggttgcggcggttaccgcggggaggaggagggagttgtgctgttgggggtttggatctagagcgagcataggatgggagctgctggctcctgagctgcgccgcgcgttgccctccggtaaatcccgcctcaccttcaaagagatgctgttctttcctcggttgatttctccttctcgcgctatcggttgttcgttgggttgctctccgcggctgggagaagattcttgttggtgagcttgttttgtgggggatggatagatggataggccggtggcgtgcgatttaggagtggacgtcttgggttcttgctacaggcgattttcctgatgcgtgggatgcatatgcgtgttcttcctgaatctgtggcatttactgtagaatggggataaatttgcacagtagaaagcaaatattgttagaccctattttgctgtagtacatttcggcagattgggaggattggtgttcgttgcatgcaattcctcccctggaatcaatccgtttggttgctttatgctgttaattacttgatctgttatacttcatgtaattgggtggtctattattgttcaacaataaattggagccttttccaggattacttagggagccatgcatttaatcgatgataatgattattgtgatcttgaggattcgcttcaactgttatctgatgctgttcattaagcaaagcgttttattgctacatccctagtaatactgaatgatttgctccttaaactcttggcataaatatgactgccttcaatgttcacgcgctaaataaaatgttcagtttttttgtcaagatgtcccgttaagcttcaagtgtgaatgatctgtactgttcagattcgaatttttggcactgatgttctgctctggttcattcaggtaccatgcatttaatttatcccctaatctggtaccgtggtacattaaactacacaaatgtccagatgtctttgaatggatctgatgaatcatcagtatgaacttgattgataccatgctttgtataactatgttatttaatcctgccaatttcttcaagaatgtgagatgtgccaccagccactacttaaggaaaacattcgaagtgcttgtaatatgaaaagggactgctttctttgttaaatatagtgtatatacacagagcatttgtcctctttttcagtgttttccagtttagtaaattctcagatggaattttacccaaactctctgattttgtaaagagcaaagctccccccttacctttcttccacctctatttagctaagagaactgtcctgattcctgacccaatcttgctagtttggctacaataggccattttttttgctttatattttgttcctcttacaaagaatgaatcttgctatagagaaggctctgcctgaatttatattatttccttaagacaagttatccgtgttaagtgttctttttttctactgattgattcagggagatgaaattcgataagaatcaaagcttcacaacatctactgcgaaattggataggaatcaaagcttcacaacatctactgtgaaattggataagaaccaaagcttgttattttctcgtggatagcagacatcatgggtactggatcagttaccgtgaaacaaaagaagcgagtaaagcacactaagaacaagtacttgaaacctggtgctctcgcccagattcgttatagcaggagcacaagcagggatataggaaagaaaaggattctgttgaatgtggataaggatgagttaccgcaggaggaggttgcattcgaaaacactgaacctatgatgtcgcctaaaaggctcaactttgagccatttagtggaactaaggggcaggtaatgccaataactccaaagactcctcagtcagatgaattatctgatggtcattcaagacttgaatcacttccacttgaattgctggtatggaaatgaaactgcctttttaaatctttattgtgcattatctgtactgtatctgatcgccattttttattatatagatcaagatcatttgttgcttgcaccatgatcagctgaatattgttttccatgtttcaaaaaggatccggaaggcagtaagtattttctcttgaacttttgaccatccctttttgtctagtcaacatgttctcacttacttaggcacctgtagatgatgctttactagatattagtgacattggctcttacttttctatatattgctgaagaatgctcatcacccatttcacctgtttaactgagatcggctcttggctaaagttgcttgtccattcattgttaaattgtgtaaacctaagtgaactaatttcaattcatattaatacttcaaaatgtctgtatagagcacttctgaatcatctacactggcccattgcttcattttttttgcattctcaacattctatttgttgagttattttgcatttatttgctcaaacatcttttaccgaattagcttgcattctccatgtttcatataccgtttccccctatcccaaactcatgttttctgggatttgtcaactaggttgaattggcgaggcagtaccattttaactacactaccccagatcgaagcagacaggaactactccagcacaccactcctcttccaacagaacattggcctttcatgaggttacttttagtcacatcacatttgctctcctaataacaccgtgttgcactaattctaaaatgttgtaacaaccactttcttttcagcaggattgatggcaaggatgtgcggatttctaccccaagaaccccaaaggctccaaaacatgctcctcggcttgcgcgccttgagctgcttgatttcaagccaatcactgctgttcttttcccagacacatttccttcaaaacgtctgcgccgttcaatgccaccaggattgccaaggcctgtgtccaaagctgcatcctcgactagagttttactgtatgaggaggagctttgcgaagcggtggcacagaataagcttctttgaagctgcaatgacctttaggcacaaccagcaatatgttattgcttccatctcataatgtacatgattatctatgtcaattccctagcatgagttttgtttggttaggcagttttagactagtatttttttgaagaacgttttagactagtcattagcatgttatatagtaagaagaatctagtttggtttattccctggtctgtatatagtaaatgtactggtaaactatttatagctaataatttgcttgcagaaatgatgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0438500, RefSeq:Os10g0438500