Os02g0705500

From RiceWiki
Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0705500| Description = Basic helix-loop-helix dimerisation region bHLH domain containing protein| Version = NM_001054403.1 GI:115448176 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0705500

Description

Basic helix-loop-helix dimerisation region bHLH domain containing protein

Version

NM_001054403.1 GI:115448176 GeneID:4330462

Length

2210 bp

Definition

Oryza sativa Japonica Group Os02g0705500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30003943..30006152

Sequence Coding Region

30004073..30004110,30004523..30004601,30004698..30004991,30005095..30005229,30005324..30005590
,30005677..30005949

Expression

GEO Profiles:Os02g0705500

Genome Context

<gbrowseImage1> name=NC_008395:30003943..30006152 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30003943..30006152 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaatgcggcggcggcgacgtttcacgacaccggaagggtcaccttgacaccgtcgagagcctctgccaggggctactcgacgacgtcatgctcgacgacgacaagtgccgcgccatgttcggctacctccaggagtggcaggacctggcaagcatgtgttacgggagcttaggcggcgagccgccgctggcgccggaggccagcaacggcagcggcagcagcggcggcggaggcagcttccggaagaggagaccggacgacgcaaagggtgagagcaacagcatctgcaagaggcagagagggaagcagcaacagcagcagcagccgtgtcatcccgatcagatggcggcggcggtggggaaaggaaggccggagagggcacggccaggagccaagaagaaggcggaggtggcgtcacccaaggattccccggcgacctcggcgtcgacggtgaccgccggccagaagaccgactacatccacgtcagagcccgccgtgggcaggccacggacagccacagcctcgccgaacgggtgaggagggagaggatcagcgagaggatgaggtacctgcaggagctggtgcccggttgcaacaaggtcaccggcaaggccggcatgctcgacgagatcatcaactacgtgcagtccctgcagaagcaagtcgagttcttgtccatgaagatcgcggcatcaaacccggtggtgaacttcaacatcgtcgaggacctcttcggccggcagctcagccaggcggcgtgcaaccctgcggctctgccggccatggcgctgccgatggcgcaggtcgagccttcctgcctccagatgagccccttgcagcagatgcaaacttctgcaggatcctctggctatgggctggagatggtcgtcagtaaccagtactcaccaccgggcgggccgatgtcggtgccggccggtgcatcggtggagccatgcctcaacgtgaatggagctgcaggttgggacattggctctcacggtttgttcagtggatttgatgcaccgtttcagtcagtacagagtgattgtttgctagacaatctcaaaatggaaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAQCGGGDVSRHRKGHLDTVESLCQGLLDDVMLDDDKCRAMFGY LQEWQDLASMCYGSLGGEPPLAPEASNGSGSSGGGGSFRKRRPDDAKGESNSICKRQR GKQQQQQQPCHPDQMAAAVGKGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTD YIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQ SLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALPMAQVEPSCL QMSPLQQMQTSAGSSGYGLEMVVSNQYSPPGGPMSVPAGASVEPCLNVNGAAGWDIGS HGLFSGFDAPFQSVQSDCLLDNLKMEM</aaseq>

Gene Sequence

<dnaseqindica>2043..2080#1552..1630#1162..1455#924..1058#563..829#204..476#aaaagagggagggagagaaagggacacgcaaacttcaggcacaagaaccctccccttaagcttacacattagctaccatcctgttgcttaccttgaaagggtcacatactacctatttgcatcaaaggataggaagaaccaaccaaatcttagctttgttcctagaattgatcgtcttctcttcttgctaagtggttagtaatatggcgcaatgcggcggcggcgacgtttcacgacaccggaagggtcaccttgacaccgtcgagagcctctgccaggggctactcgacgacgtcatgctcgacgacgacaagtgccgcgccatgttcggctacctccaggagtggcaggacctggcaagcatgtgttacgggagcttaggcggcgagccgccgctggcgccggaggccagcaacggcagcggcagcagcggcggcggaggcagcttccggaagaggagaccggacgacgcaaaggtgagagagatttgtgcattggctgcaaagagttcagctactacccgaccgagtatttgactggcttgtgtatgtacctgtgtcagggtgagagcaacagcatctgcaagaggcagagagggaagcagcaacagcagcagcagccgtgtcatcccgatcagatggcggcggcggtggggaaaggaaggccggagagggcacggccaggagccaagaagaaggcggaggtggcgtcacccaaggattccccggcgacctcggcgtcgacggtgaccgccggccagaagaccgactacatccacgtcagagcccgccgtgggcaggccacggacagccacagcctcgccgaacgggtacgccaccgccattgatcctgcctccatctcgcgtctttgttgcgaggcgagagctaacgacgacatggccaaaactgttatttttttgcaggtgaggagggagaggatcagcgagaggatgaggtacctgcaggagctggtgcccggttgcaacaaggtcaccggcaaggccggcatgctcgacgagatcatcaactacgtgcagtccctgcagaagcaagtcgaggtacgagcaccaacgctccagctccctcctccatggatgcagctctgctttcttgctcggtgtttgttcatcgaagggcttgccgtggctgctgttcttgcagttcttgtccatgaagatcgcggcatcaaacccggtggtgaacttcaacatcgtcgaggacctcttcggccggcagctcagccaggcggcgtgcaaccctgcggctctgccggccatggcgctgccgatggcgcaggtcgagccttcctgcctccagatgagccccttgcagcagatgcaaacttctgcaggatcctctggctatgggctggagatggtcgtcagtaaccagtactcaccaccgggcgggccgatgtcggtgccggccggtgcatcggtggagccatgcctcaacgtaggtggctgtaaaaattagtcctccttgacggggtgtgtggttttctagtaactgcatttctgaacttaggggggcttctgtatgctgctgcaggtgaatggagctgcaggttgggacattggctctcacggtttgttcagtggatttgatgcaccgtttcagtcagtacagagtgagtaactgattctgagaatcaagcttgcaggttactttgtgctgaacctaatgtgaaagaacacagacaatagttagtccagaaaaaaaattataaaacatttcctgatcaagttaacaattcagagtacagggtaaattgacaggtggttaaagaactaaaaaaactgcatccatcctcgtatagttgctcatatgtacaaatttgcgttaagctcatatgtataaatttgcattaagtgaaaggtgtacgtattatgcttaagcacgctagcataatgttatgaacaaaattatgcttaccttaaccaagtttttgtacctgtgagtgatgaaagtgttaaagcttgaaagagtcccttttatatttaacttaagtgactgaatccagcttctgctttctcctgcaggtgattgtttgctagacaatctcaaaatggaaatgtaagaaggaatgaaggaaggagaagtccgcattccaagagttttaaccacatcaatatttgtggctgaagattctttattcatagaaactgtactaatgtcatcaatggcaatacaagtacatttgtgtgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0705500, RefSeq:Os02g0705500