Os02g0705600

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0705600| Description = Armadillo-like helical domain containing protein| Version = NM_001054404.1 GI:115448178 GeneID:4330463| Length = 638...")
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Gene Name

Os02g0705600

Description

Armadillo-like helical domain containing protein

Version

NM_001054404.1 GI:115448178 GeneID:4330463

Length

6381 bp

Definition

Oryza sativa Japonica Group Os02g0705600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30021912..30028292

Sequence Coding Region

30022742..30023504,30023625..30024823,30025272..30025379,30025497..30025682,30026129..30026185

Expression

GEO Profiles:Os02g0705600

Genome Context

<gbrowseImage1> name=NC_008395:30021912..30028292 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30021912..30028292 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaataggaacaaagaagatatgggtccatcccagcgtaattcttgccctaaggttcacagctcaatgtgcagtgagctgacaatgatgttagataaagtctcctctattcttccattaattgaggcagctcgaccaggatgtaaagcaggtatacaggaattatgcaacctatacaatatagttgagaaagggaaactcataattcagcactgcgttgaatgtagcaagctctacttggctattactggagaggcgattgtatctcggtgtgaaaggatcagagactcacttaggcggagcttgttcctgattgagaacatggtcccaccagcactagctaatcagattgttgacgtccatgatgatcttggggacataaaatttgttattgatcccacagaagaagaggctggcaaaaccattttagagatgcttcggcaatctgatgtgactgaagaacttgaacttgagacattcctgcaggcagcttcaaacttaaacctgacatctcctaaatctatgctaattgaacgaagggctatcaagaaactgcttgacaagattagcggtactgatcccaaaaaggagggagttcttaagttccttctataccttgttaaaaagtatggaaaaaacatcaaaccagaaactggtgagcggaatgaaaacatgcaatctgaaagccagtcttcgactccaagctcaagttttgttagtgataccagcactcctggaaagtggtacacacccacagacatccagaggaatgaggatcagactagtatgtcaggagcagccacaccacctgcagagttctgttgcccaatatcaacaaagttaatgcgtgatcctgtcataataacatctgggcagacttatgaaagagaaaatattgagagatggtttagggagggatatgatacctgtcccaggacacatataaagctagaaaatttcgcgatgattccaaatacttgcatgagggacctcattttcaattggtgcaaagagcatggtttcataatctcagatattctccctccatccaaaaatgcatacagttacttgccggagcaattgcatggttactccatgtcaagtctgcacaatgtttcagtacctctaattgctggaaaagtcagggattttgtgattgaccatagcacttcatctgttgcattatctgaggccagttatatgtcagattcatatcatgtgcgggacatggaggaaccgaaagatagtttttctcagttctcttggagtgcggactatcaagagtgtttgtcttttcgcaacttcaaccaggacaagttcctaaggttcttttacgagctgtcgaagctcccattggaactccaagacaggtccattggtgatttgaagatcattctcaatgaggaaaatgaggcttcatgtgctatggtttccaatggatttgtagaggcattctttgatttcttaatgaatgaagatggaagctacagtatgcaagctcagaaagttggatttcagttctttcgtgtttttctttccaatagcaggactaatattctacacatgaatgaagaagcattccgtctatttgcatcctttattgattctgagttaaaaaccgaagctttgctgacacttcacgagctggttcaacacctgagttgtcgacaatcccatttgatggcctctattatcactcctttattggagtctgaagatgccgagggtctcaagctttgcctgaagattgtctgcaatctttcatctgattcggatgtaaaaccatacctaatttcactgggaattgtctcaagattgtcacccattctttctgaaggaacctttgctgagtgttgcttggagattttgcggaacctgtgtgatgtggaagaagccacagtgcttattacaaaaactgatcgatgccttggttccgttgcagaatatctggacactggaagccctaaagaacgagagcatgcagtggttatccttttagcagtatgttcccatagttctgaggattgtttacttgtaatgaaggaaggtgtaatccctgcccttgtggacttgtcagtaaatggaattgatgaagcaaaaggttgttcaatgaagctacttcatcttctcagggatctgaggcgaaccgaccagttgaacaactcatgttcacaagaagtggttgtcacagatgtagtggagggtcctcctgacagttcaattcacaagcagccaataccaaagtcatctcgttttttccaaagaaagttgaacattttctcaaagccccggtcacttacgctattctga</cdnaseq>

Protein Sequence

<aaseq>MENRNKEDMGPSQRNSCPKVHSSMCSELTMMLDKVSSILPLIEA ARPGCKAGIQELCNLYNIVEKGKLIIQHCVECSKLYLAITGEAIVSRCERIRDSLRRS LFLIENMVPPALANQIVDVHDDLGDIKFVIDPTEEEAGKTILEMLRQSDVTEELELET FLQAASNLNLTSPKSMLIERRAIKKLLDKISGTDPKKEGVLKFLLYLVKKYGKNIKPE TGERNENMQSESQSSTPSSSFVSDTSTPGKWYTPTDIQRNEDQTSMSGAATPPAEFCC PISTKLMRDPVIITSGQTYERENIERWFREGYDTCPRTHIKLENFAMIPNTCMRDLIF NWCKEHGFIISDILPPSKNAYSYLPEQLHGYSMSSLHNVSVPLIAGKVRDFVIDHSTS SVALSEASYMSDSYHVRDMEEPKDSFSQFSWSADYQECLSFRNFNQDKFLRFFYELSK LPLELQDRSIGDLKIILNEENEASCAMVSNGFVEAFFDFLMNEDGSYSMQAQKVGFQF FRVFLSNSRTNILHMNEEAFRLFASFIDSELKTEALLTLHELVQHLSCRQSHLMASII TPLLESEDAEGLKLCLKIVCNLSSDSDVKPYLISLGIVSRLSPILSEGTFAECCLEIL RNLCDVEEATVLITKTDRCLGSVAEYLDTGSPKEREHAVVILLAVCSHSSEDCLLVMK EGVIPALVDLSVNGIDEAKGCSMKLLHLLRDLRRTDQLNNSCSQEVVVTDVVEGPPDS SIHKQPIPKSSRFFQRKLNIFSKPRSLTLF</aaseq>

Gene Sequence

<dnaseqindica>4789..5551#3470..4668#2914..3021#2611..2796#2108..2164#tctgcggccgcgccatctctatccgggctcaagggtgtggccggggggcgacgaacgccgctctctctgccttcctccttgaccgatcgctcccttctgaccgccttaatattctggaaagatcggttcttgccttcttgggctgcttcaggggcgtgggagaggtttggggttggttcatctcgcgggcttgggcggcgggaggaggagaggggttttgctttgtctcctgttccgactctccggttgattcctccgactgagttcagggggagttcttcaatcaggaaggtcttgactctcgacgaggaggttcgttcatttccgaagtgttttttctcttcttggtttatgctgttaacgtgtactgtattgttgcttgattgttgtttatctcgtattaataatctgagctattaggatccttttgttaacaaagtgaggtttttttgatggtttcgatgaacagtgaacctcatcttcctcgggtgtgacttgtgatttggtactttagtattgggtagtttagctgtctgccttctcccgtcctgttcgttccctggagaccaaaaccttacctttgtttctttgtattgtttcagtttgcacgttttaggtccattccttaatacaaaaaggggttaattttgcattcttctctgctccttcttcattctccttgtatggtagtcgatctggttggggtttaagcctcatgatcagagaattctgtagaattgaatggttcttgtgcttcagtgcttgtgttaggctccttccagaaaatctcttgcaagattcaggtatgctgccttggtacagttggcaatgtgaagtgacaaccttagaatatactactttctccgtcccaaaatgtaagcatttttgaggttggcacgggtattaagaaagtaggtgagaatgattgaagaaggtgtgtgattagttgaaaagagaaagtaggtgaaaaagaatggttgtgattggttgagaggagaaggtaggtaaaaatagcttcattttggcacaaagtactgtgctagaaatagctacattttgggacggaggtagtactaatttagtattagtgtgccctttgtcttatcaggcgattcacttctgtaccaatctacatggatatatgaaattggcccgtagccttgaaaaagcactatagttttgaaacaattttgtttgtcaagttcttaatgctcttcctgtgacaatacaagaaagttgacaagaatctaaaacgtacaactgaccacatatgcatttgctcaggaagatgaaataatattgcgagctatactaataaactgataacatcataacaccacttttacacctatccagtgggtgcttaaagaattgaatacaatggttttgaccaattagttggcttcaacctacggtaggaattcaactgaaaggtgtaaattctgttaattgatcaacaatatagcagtatgttgacctaattagtcgatttttggcaacactgggagactgggagtcaggcttgggtgtgtatctagctagaacttctgtgtgtgcaaaggatgtatcctgacctatttggaatcagccattttttatacgttgtacaatttatctgcaaatttatattagcaaacacttttttcaatagcacgcaaaaggctcgcatgccattttttatttataaaagatgaaaaacattagctacagcaacaaccacgccccatgataagatgggtgatgatacagcatggggtagttgctagagactttactaagataaacaatttattaaatgtccaaatgttatcttctctttagtttagcttgtttaaagtgaatagtatctactagaacaaacctttttacaacaattgatagttctcatcaaagaaaacacaattgattttcccttgattcatgaccactaaaaactttgagaatcaacatttgtttgattgaattatcctatcctaaatcgagaaaaaataattatgcatgtccttcctactttggtaagatgcactttaatttgatccggttattaccttctgtgctgaaacagttcaaggttcttggattaaagattggcagtcattcatcgtggatggagaataggaacaaagaagatatgggtccatcccagcgtaattcttgccctaaggtagaatgctgaattactccctcctttttactaatattttaactatcgttcaagcataaattctgtggctatttgccactttcatgcaagcgaaagcactcttgcaaatggtggggcagtaacgctcgttcccgtgatcccaattttttggccctttgtggcatggtgatggtgtcatgtgaagctaaatgctagtgaccgttgaagttgtaacattaatataaatatcatcatgtaaaaggagaagaatgaatcctcatattgcaagctttcaaacctgactctcaagagacaactcgattttctgggaatggatatctagactgaataatagagtttattctcattatctagtgtgtcattgtaaaaaaattatgtattcgtcctatccatttcatattccccattatttgtatgtttcttattcgattgttttgctctgttaggttcacagctcaatgtgcagtgagctgacaatgatgttagataaagtctcctctattcttccattaattgaggcagctcgaccaggatgtaaagcaggtatacaggaattatgcaacctatacaatatagttgagaaagggaaactcataattcagcactgcgttgaatgtagcaagctctacttggtaagttaattcttgtgtttattggaaactaagaatatgatatccttcatttattactgatttgctaattattattattttaccatttgatgattgtgtgtatgtatttgtgttcaggctattactggagaggcgattgtatctcggtgtgaaaggatcagagactcacttaggcggagcttgttcctgattgagaacatggtcccaccagcactagctaatcaggttagttcattttgtgatctttgttgttttactctatcatgtcagcctcacaaactcaaagtcattatactgtttataagttaaataacaatttttttttgcttccctcatgtgcatgaattgctatatagcttttcttttggccagtaaataaaagcaatactgaaagatatcttgtattcttggaatttgattttgtcttctccaaacaactgagttttcaaaggtctccagacctacttctgtaaagtaatatgatttaacttgaaatactagtaatttatagaagcacctgcaataagcagcaaattgatcaaaacatgcttcttataacttgcagttagaggatatatcacttttatcatggaattctgtgtattgctatgatatctttcttgcaactacttctcatttgcttgattgtttatgaagttactttttctcacagattgttgacgtccatgatgatcttggggacataaaatttgttattgatcccacagaagaagaggctggcaaaaccattttagagatgcttcggcaatctgatgtgactgaagaacttgaacttgagacattcctgcaggcagcttcaaacttaaacctgacatctcctaaatctatgctaattgaacgaagggctatcaagaaactgcttgacaagattagcggtactgatcccaaaaaggagggagttcttaagttccttctataccttgttaaaaagtatggaaaaaacatcaaaccagaaactggtgagcggaatgaaaacatgcaatctgaaagccagtcttcgactccaagctcaagttttgttagtgataccagcactcctggaaagtggtacacacccacagacatccagaggaatgaggatcagactagtatgtcaggagcagccacaccacctgcagagttctgttgcccaatatcaacaaagttaatgcgtgatcctgtcataataacatctgggcagacttatgaaagagaaaatattgagagatggtttagggagggatatgatacctgtcccaggacacatataaagctagaaaatttcgcgatgattccaaatacttgcatgagggacctcattttcaattggtgcaaagagcatggtttcataatctcagatattctccctccatccaaaaatgcatacagttacttgccggagcaattgcatggttactccatgtcaagtctgcacaatgtttcagtacctctaattgctggaaaagtcagggattttgtgattgaccatagcacttcatctgttgcattatctgaggccagttatatgtcagattcatatcatgtgcgggacatggaggaaccgaaagatagtttttctcagttctcttggagtgcggactatcaagagtgtttgtcttttcgcaacttcaaccaggacaagttcctaaggttcttttacgagctgtcgaagctcccattggaactccaagacaggtccattggtgatttgaagatcattctcaatgaggaaaatgaggcttcatgtgctatggtttccaatggatttgtagaggcattctttgatttcttaatgaatgaagatggaagctacagtatgcaagctcagaaagttggatttcagttctttcgtgtttttctttccaatagcaggtaaccacatttcctctgacaaatgtgttcctttcatcagttttatattgaagatcatttgctctcatagctcacaatcagaatgaaggttttttaacaacatatttctttgacgtacaggactaatattctacacatgaatgaagaagcattccgtctatttgcatcctttattgattctgagttaaaaaccgaagctttgctgacacttcacgagctggttcaacacctgagttgtcgacaatcccatttgatggcctctattatcactcctttattggagtctgaagatgccgagggtctcaagctttgcctgaagattgtctgcaatctttcatctgattcggatgtaaaaccatacctaatttcactgggaattgtctcaagattgtcacccattctttctgaaggaacctttgctgagtgttgcttggagattttgcggaacctgtgtgatgtggaagaagccacagtgcttattacaaaaactgatcgatgccttggttccgttgcagaatatctggacactggaagccctaaagaacgagagcatgcagtggttatccttttagcagtatgttcccatagttctgaggattgtttacttgtaatgaaggaaggtgtaatccctgcccttgtggacttgtcagtaaatggaattgatgaagcaaaaggttgttcaatgaagctacttcatcttctcagggatctgaggcgaaccgaccagttgaacaactcatgttcacaagaagtggttgtcacagatgtagtggagggtcctcctgacagttcaattcacaagcagccaataccaaagtcatctcgttttttccaaagaaagttgaacattttctcaaagccccggtcacttacgctattctgaaaactggtaaagatcgatctagtagtccttgtatattttataacactaacagttcttttgtatagggtggtagaggctgtattgtccaaaggaaatgcttgatgagatgatctttttcatcctcatgtattccagtagagtttgataaactattgtgatgcatcttgcagattgcagttgttttgcatcttgctgcgtgtaaaaagtaggctagatatagtttttgtatttttgtactctgctgtagtgctgttccattgacagctggaaagcctgaaaacaaggttttgtttatcttatctgaagttctgaagaaagcagaactggtgatccatccctttgttggctgttacctttccttttttcccccttttatagctggtatacactggcagaggtatcagctaattcggccaaagtcaaataggaccggattattatttagatctaactttccaacttgaatggtaatttcgactggacattggattagtgtggtaacttgaggcttattaatcatctctttgggaacttacaccctttttctttatcaaattataaaatttctcatccatggctagcgccaggatgattcaaggtggtgccggctcctatcccgttggatccttacggagagaggggaggaggaagaaggagaggaaaagaaatagggggcgttgaggaagagaaggatccttatggagcttatggagagaagtaggggcaccgaggaagaagaaggtgagcctccctttcatattaatcctgtaaatgacggttatctaaatataatctttttccatgttatatcaaggatatacaaacaaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0705600, RefSeq:Os02g0705600