Os02g0706500

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0706500| Description = CbxX/CfqX family protein| Version = NM_001054406.1 GI:115448182 GeneID:4330465| Length = 5161 bp| Definition = Oryz...")
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Gene Name

Os02g0706500

Description

CbxX/CfqX family protein

Version

NM_001054406.1 GI:115448182 GeneID:4330465

Length

5161 bp

Definition

Oryza sativa Japonica Group Os02g0706500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30086008..30091168

Sequence Coding Region

30086096..30086370,30086459..30086558,30088153..30088263,30088352..30088661,30089113..30089203
,30089344..30089653,30089837..30089985,30090282..30090786

Expression

GEO Profiles:Os02g0706500

Genome Context

<gbrowseImage1> name=NC_008395:30086008..30091168 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30086008..30091168 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgcctccggtcgcggacggcggcggcggcggccgtcattgccgcgtccgcggcgtcgctcgccgacgtcgcctacgcggacagcggctactccttcttccgccgcagctcccccccgcctccacctcccgccgccgccgccgccgccgctgcttcggaggactctggcacggaggtggccgtcgaggtggattccagcgggttcgaccccgagagcctggagcgggcggccaggttgctgcggaagctcaactcgtcgaaatacgcgaagcagctgtttgagctgatgcgcatgcaggagaagacccggcttgcggagctggaggccgagaaggttcagtacatcatccaacaacacctcagggacattgagaggcaacagaaagaaggtgaaaaattcagagagagtttgcagcagcaagctcaagcagaggcacaaaagttacgttatgacgatgaattagctaggaaaagaatgcagacggagcgtgaagcacaaaggcgacaggatgcagaacttgtgaagatgcaagaggcagctgcccttaggaaagaagaagttaggcgtaccacagaaaagaagattttagaaaaaatgctagaggatgagaaagaaaaggctctcttaaagaaacaaaatatccaagctaacgctgaagcaaaaggtgaagcccttactcgtgaagcaaaggctttagaagactacaacagaaagatgctcctggaacgtataaatggcgacaaagagaagtggattgctgcaataaatactactttttcacacattgaaggtgggtttaggatgctgttgactgacaggagtaaattattgatgggtgttggaggagttactgcgctcgctgctggaatttatactaccagggaaggagcaaaagttacatggggttacattaatagaatcttgggtcaaccttcactgatccgtgaatcatctatgccaaagtttccactttcaaggtttaaggctctcaaatctacttcagcatctctgtcaggaggtgcaggctttgagaatgttattcttcatccttcactgaaacggaggattgaacatcttgcacgagctacagcaaatacaaagtcgcacgatgcaccatttcgcaacatgctgttctatggtccccctggaactgggaaaacattagttgctagggagatggcacgcaaatctggcttggattatgccatgatgacgggaggagatgttgcacccttaggatcagaagctgttaccaaaatacatcaaatttttgactgggctaagaagtcaaggaagggcatgctgcttttcattgatgaggctgatgcgttcttgtgcgagcgcaacagcacccacatgagcgaagctcagcggagtgctctcaatgcactactatttcgaactggagaccagtcgagggatattgtccttgtccttgcaacaaaccgacctagtgatcttgatgctgctattacggaccgcattgatgaagttattgagttccctttacctggggaggaggagaggttccagctgctcaggttatacttaaaccactatatgctcaaggaagatggaaaaaactcgttttgggactcactgctgaaaaagcaacggcagaagatacaagttaaggacataagtgatgatttgctcagggaggctgccaggaagatcaatggattctctggcagagagattgcgaagcttatggccagtgtgcaagctgctgtttatggccgccctgactgtgtgttggatccccagttgcttatggaggtagttgaatacaaagtggctgagcatcatcagcgcatcaagcttgcttctgagacttcaacttga</cdnaseq>

Protein Sequence

<aaseq>MWRLRSRTAAAAAVIAASAASLADVAYADSGYSFFRRSSPPPPP PAAAAAAAASEDSGTEVAVEVDSSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQE KTRLAELEAEKVQYIIQQHLRDIERQQKEGEKFRESLQQQAQAEAQKLRYDDELARKR MQTEREAQRRQDAELVKMQEAAALRKEEVRRTTEKKILEKMLEDEKEKALLKKQNIQA NAEAKGEALTREAKALEDYNRKMLLERINGDKEKWIAAINTTFSHIEGGFRMLLTDRS KLLMGVGGVTALAAGIYTTREGAKVTWGYINRILGQPSLIRESSMPKFPLSRFKALKS TSASLSGGAGFENVILHPSLKRRIEHLARATANTKSHDAPFRNMLFYGPPGTGKTLVA REMARKSGLDYAMMTGGDVAPLGSEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCER NSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPSDLDAAITDRIDEVIEFPLPGE EERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDISDDLLREAARKINGFSG REIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYKVAEHHQRIKLASETST</aaseq>

Gene Sequence

<dnaseqindica>89..363#452..551#2146..2256#2345..2654#3106..3196#3337..3646#3830..3978#4275..4779#aatctcctcctcctctccctctctcttttttagttcgccgccgaactctccaaaacccccacgaaaaccctcgcttcccaccgactccatgtggcgcctccggtcgcggacggcggcggcggcggccgtcattgccgcgtccgcggcgtcgctcgccgacgtcgcctacgcggacagcggctactccttcttccgccgcagctcccccccgcctccacctcccgccgccgccgccgccgccgctgcttcggaggactctggcacggaggtggccgtcgaggtggattccagcgggttcgaccccgagagcctggagcgggcggccaggttgctgcggaagctcaactcgtcgaaatacgcgaagcaggcaaggtgtttgttgttttgacctaatgcggggtttgcccccacctactgacgctttctgcctctcgtgtggttggtttggcctgcagctgtttgagctgatgcgcatgcaggagaagacccggcttgcggagctggaggccgagaaggttcagtacatcatccaacaacacctcagggacattgtgagtgccttttgccccttcctagatgcaaataattcaatgtggtatgccaaacatggccaaaatgtcagaagattgatttctctgcagttccagtgattgactaacagaaaagtagcagtcaatttcatctaacttgttcttgctttgagtgctgatgagtcgtcagcaccacgttatcaccgttagtctatttggtgaatcatacctttactagtgaggccataaatatcttggggcttgaagctaggatgaaagatcaattgtggttgtagtttgctgtggcatgatatttgttggttatgtcgcccttatttttctcttttttcaataatcactagaagatgacttgtgcgttgcaacgggaaaaaagtaaaaaaaatattaaatattagatgattagggtctaattttcctgataacatgttcttcgcataaagtttgttgtccagcatctccaactttaaaaattggtctagtgacaatacagggtgagataaaacattactcatgagggagtactaaagatacatatgaaaggaggctgtgctaaagtgtgattttttttatttaagagggcatgtatagcgtaattaaagatgcaaatgaagaaaaacaaagaacctgactcctaggcatagagttgcttatatgcatggttgcacaccctgttatgatcatctctgaacgctgttagtcagttttatatgtagccatgtcctcatgtagtaatgttctgccgcaataatagtaataataataataatccccagataagaattgagtttatgactactcccatagacccccaaaaaaaaaggaaaagggaaaagaaagtatcgctatgtcgatgaaattagcattaaattaaattatgtttgtgtgatgtaaaaagagaaaaagaaaagaaaaggtctttagatcaataagatattagtattgaatgaaaaaagcatgctctttgacagagctagaaaagccaattaattgcctgtatatgtggagttgcttctattctgattgacactgtatttttcccttccattatacgacgccgccagatccacgcggccgctgctcgcctcctcgcatccctcgcatgacttcaggcctgcaccttttttttttcttttatatttttcattcaccaaggcgctcaaagggtctagacaccgaataccccatatattgactattgcgtttgtgtcttttccctccttaatcaatggtcgtttttcaccaaaccatgtaccaacacgttgaggtttatttgctgacgtggcacatcccaattgcagattgggttttatctttcactcagagagataggctatgtgcaccctagttatgcagaggcttggagtgatcttagagtggctatatcaatattgatgtaattatctaagatcactaaagcttcctttataaaaagaaatagaaactgaaacagtaaacatgcaaaacattcaattctgccttggcccttttgaatggcaaagacatcctatgagatatcatggcataaaatggaaagctttagattgttagcaatctactcatgtttatcctctgatgctcgatatctggtccacaggagaggcaacagaaagaaggtgaaaaattcagagagagtttgcagcagcaagctcaagcagaggcacaaaagttacgttatgacgatgaattagctaggaaaagaatgcaggtattgactcccccctctgtttaccttctttaatggcaaatggtgctttaacagcacagcatcatttaatcaagttttttttttccagacggagcgtgaagcacaaaggcgacaggatgcagaacttgtgaagatgcaagaggcagctgcccttaggaaagaagaagttaggcgtaccacagaaaagaagattttagaaaaaatgctagaggatgagaaagaaaaggctctcttaaagaaacaaaatatccaagctaacgctgaagcaaaaggtgaagcccttactcgtgaagcaaaggctttagaagactacaacagaaagatgctcctggaacgtataaatggcgacaaagagaagtggattgctgcaataaatactactttttcacacattgaaggtgtttattttcctgctagtgacaatccttacgaatttaatcttgaattccttttggttctgctactattgctggttactcatagtaaatgtgtatgccttttttgatcagtcattattgaagttcttaggtttgtaatctccttttccctgtattctaggaattttctcaattcgacaatatcattggcattctcacatagatatttctctctgtttttagtggttatggtgtccagtaattgtgtggaaatgtcatcacgtgaaatcgcaccaccatatattcattgttcattttattattatttaagtgaaactatggtctcatgtcaaaattaataatatgtactgtgtgacacatctgttcttcattttcatgtaattgtcatgggaatgttgataaccgatactttatttttcattcaaacttattttctaatgtgaacttgtaggtgggtttaggatgctgttgactgacaggagtaaattattgatgggtgttggaggagttactgcgctcgctgctggaatttatactaccaggtttatctggatttcatgctgaatttacttttgaagtatgcatacacacaaaaccacttcacggcttgacttcatctttcccttgtcagcaaaaattgtttgagacatgtcatgttcttatttactcttttgtactttagggaaggagcaaaagttacatggggttacattaatagaatcttgggtcaaccttcactgatccgtgaatcatctatgccaaagtttccactttcaaggtttaaggctctcaaatctacttcagcatctctgtcaggaggtgcaggctttgagaatgttattcttcatccttcactgaaacggaggattgaacatcttgcacgagctacagcaaatacaaagtcgcacgatgcaccatttcgcaacatgctgttctatggtccccctggaactgggaaaacattagttgctagggagatggcacgcaaatctgtaagttttcaatagatctaattggctaatctattctgctccattcttcgagaaatatcaggcttatggatcttctataaagaaccttgttttctggattttttttaatacaaaaatatgtatccgtcaacttcagttatacaacaattgtataatcttaccattgcatcctttatgtgacagggcttggattatgccatgatgacgggaggagatgttgcacccttaggatcagaagctgttaccaaaatacatcaaatttttgactgggctaagaagtcaaggaagggcatgctgcttttcattgatgaggctgatgcgttcttgtgcgagtatgttcacaacttaatatttaagcatttgtctgaccactgattttttttttcacagatagtgatatgcatgttaatgagctaatcctgaggatattcccaattcttaagcttgacttgaactaattttgagcctgacagtacatccaatctctttgcagccactgaattcaaacaaagtaaagcaaacttcgttagaacccaaaacaacaaatctttatcataaatttattttaccatatgaccaaatttcacatctctcctttaatctcatgcttttccttgcactttactaggcgcaacagcacccacatgagcgaagctcagcggagtgctctcaatgcactactatttcgaactggagaccagtcgagggatattgtccttgtccttgcaacaaaccgacctagtgatcttgatgctgctattacggaccgcattgatgaagttattgagttccctttacctggggaggaggagaggttccagctgctcaggttatacttaaaccactatatgctcaaggaagatggaaaaaactcgttttgggactcactgctgaaaaagcaacggcagaagatacaagttaaggacataagtgatgatttgctcagggaggctgccaggaagatcaatggattctctggcagagagattgcgaagcttatggccagtgtgcaagctgctgtttatggccgccctgactgtgtgttggatccccagttgcttatggaggtagttgaatacaaagtggctgagcatcatcagcgcatcaagcttgcttctgagacttcaacttgagcaatgttatagattttatcagaaagcagcagtccttttcagatctactgtccccatatatatgttctgatatgaggaatggagtgagatatagtcagtttcctccagctgacttcgatagaagttgaaatttagaacacaccggatactgatgttcttctttgcggggggtatgacctaggcttgtccggttccaattttgttccatctctttgcctgtagcatatttatggtggtttttatggaaatacaggcaaataggtaagactgagatgcgcatgctgaaaatcttatttgactgaagtggttcaaccattcatcttatttgttagaatttgattttgtcttcattatcatagatgatgaaaagttgaacttaccg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0706500, RefSeq:Os02g0706500