Os10g0438600

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Revision as of 08:39, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0438600| Description = Similar to Family II lipase EXL3| Version = NM_001071217.1 GI:115482177 GeneID:4348715| Length = 2827 bp| Definitio...")
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Gene Name

Os10g0438600

Description

Similar to Family II lipase EXL3

Version

NM_001071217.1 GI:115482177 GeneID:4348715

Length

2827 bp

Definition

Oryza sativa Japonica Group Os10g0438600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16191292..16194118

Sequence Coding Region

16191676..16191860,16192600..16193092,16193175..16193305,16193808..16194075

Expression

GEO Profiles:Os10g0438600

Genome Context

<gbrowseImage1> name=NC_008403:16191292..16194118 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:16191292..16194118 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagcagcagaagctctctggtggtcgcaatggcggtggtgatcctgcaccggtggtgctgcgccgctgctccggcggccgcggcggcgaaccggacacggacgccggcgctgttcgtgttcggggactccatcgtggacgccggcaacaacaacgccatcacgacgctgatccggtgcaactttgcgccctacggcaaggacttccccggccacaacgccaccggccggttcagcaacggcaaggtccccggcgacatcctcgcgacgcagatgggcatcaaacagtacttgccggcgtacctcggcgcggagctcagcgacttcgacctcctcaccggcgtcaccttcgcctccggcggctgcggcttcgacccgctcaccgccgagctcgtgtcggttctgaccatggacaaccagctggacctgttcaaggagtacaaggagaagctccggcgcgtcgccggcgacgcgcgcgccggcgagatcgtgtcggagagcctgtacatggtggtcaccggcaccgacgacctcgccaacacctacttcaccacgccgttccggcgagactacgacctcgactcctacatcgatttcgtcgtccggtgcgcctcgggcttcgtccggaagctgctcggcatgggcgcgcggcgcgtgaacgtcgccggcgcgccgccgatcgggtgcgtgccgtcgcagcggaccaacgccggcgggctcgaccgggactgcgttgcgctgtacaaccaggccgccgtcgtgtacaacgcccggctcgagaaggagatcgagcggctaaacgtcacggcggcgccgccgggcaccgtgctcaagtacatcgacctctacacgccgctgctcgacatgatccagcgccccgccgcctacggattcgaggtgacgaaccgaggttgctgcgggacgggggtgttcgaggtgacgctgacgtgcaacaggtacacggcggatgtgtgcagagacgtcgacaaattcctcttctgggacacctaccatctcacggagagaggctacaacatcctgctctcccagataataaccaaatacggcttctga</cdnaseq>

Protein Sequence

<aaseq>MASSRSSLVVAMAVVILHRWCCAAAPAAAAANRTRTPALFVFGD SIVDAGNNNAITTLIRCNFAPYGKDFPGHNATGRFSNGKVPGDILATQMGIKQYLPAY LGAELSDFDLLTGVTFASGGCGFDPLTAELVSVLTMDNQLDLFKEYKEKLRRVAGDAR AGEIVSESLYMVVTGTDDLANTYFTTPFRRDYDLDSYIDFVVRCASGFVRKLLGMGAR RVNVAGAPPIGCVPSQRTNAGGLDRDCVALYNQAAVVYNARLEKEIERLNVTAAPPGT VLKYIDLYTPLLDMIQRPAAYGFEVTNRGCCGTGVFEVTLTCNRYTADVCRDVDKFLF WDTYHLTERGYNILLSQIITKYGF</aaseq>

Gene Sequence

<dnaseqindica>2259..2443#1027..1519#814..944#44..311#accactgtttgctgaaaacttgtgcagacaagacaaggtcgacatggccagcagcagaagctctctggtggtcgcaatggcggtggtgatcctgcaccggtggtgctgcgccgctgctccggcggccgcggcggcgaaccggacacggacgccggcgctgttcgtgttcggggactccatcgtggacgccggcaacaacaacgccatcacgacgctgatccggtgcaactttgcgccctacggcaaggacttccccggccacaacgccaccggccggttcagcaacggcaaggtccccggcgacatcctcggtacggcctctgctcgtccatggtgctgcatggcgaccagagtgacactaaggacctatttagtacagctgtatctccaagctctactttttttagagttggagcctgaccagggagtgaagctggttggaatgttctcataaaatgaattagatatgtagagttaggtttagacagctccacaacttcactttaaacctaacttatcgagttgaatttaagagttgaaaccctatcaaacggaccctaaactttcatttggagaggtttaaaattctgagaatcagccgattggtaaccaacttccaagaatttaaagcagctgaggaatccaatttctagcttctagtttatcttttaaattttataactatatattctgcatattctcaaaatctggatgagaaactgtaataaaactgtttaggggagctagagcttctgaaagctccctacacagcgcatatgaacatgcaagcctgaagctgtttggtatcttcagcgacgcagatgggcatcaaacagtacttgccggcgtacctcggcgcggagctcagcgacttcgacctcctcaccggcgtcaccttcgcctccggcggctgcggcttcgacccgctcaccgccgagctcgtggtaagcactcaccggcgaccacacattgccaagaaggcaagaaccatatcgaccatgaactctgacagcttcttgttttcagtcggttctgaccatggacaaccagctggacctgttcaaggagtacaaggagaagctccggcgcgtcgccggcgacgcgcgcgccggcgagatcgtgtcggagagcctgtacatggtggtcaccggcaccgacgacctcgccaacacctacttcaccacgccgttccggcgagactacgacctcgactcctacatcgatttcgtcgtccggtgcgcctcgggcttcgtccggaagctgctcggcatgggcgcgcggcgcgtgaacgtcgccggcgcgccgccgatcgggtgcgtgccgtcgcagcggaccaacgccggcgggctcgaccgggactgcgttgcgctgtacaaccaggccgccgtcgtgtacaacgcccggctcgagaaggagatcgagcggctaaacgtcacggcggcgccgccgggcaccgtgctcaagtacatcgacctctacacgccgctgctcgacatgatccagcgccccgccgcctacggtatatataaaccacacacacggacacacctcagagttccgtaattcggttcaaaaattgcgaaaaatttcaattttttttggtaaattcaataaaatttatttaaatttgaccaaaacttgttcaaatttcaaataacttaaatttcagaacttatttttttttgtttgcattatgcaatgtattgaaccctgctcataccaccacgtgcacacgcataatcctgtccaaaaacatcaccgttttttttttcttgttgcaaaagactaacgctttcttttattcataggaaaaaattgaggaaaaacataggaacaataatcctatgggatttggtactattcatccttttgatttgtaggaattaaatataggaaaagcatggaaaaatttcctatgaccacgatttcaaaggaattccataggaaaattacatctacattgagctcatttttcttttcctatgtgtaggatcaaggcaaaacactattggaagataaggtttaccccagtaaaaccattcaaattttgattgctattaacttagtactcaatttttcctttgtatcaatcaaacgatcattccgataatttttttatatttttcaattctctgttttacctatgatttcctatgctattcctaagttttttctattcctacgttttttcaattctgtgatttaaaggggccctaaatttttgcgaatcggatgatcaaactctgttcttgtgataggattcgaggtgacgaaccgaggttgctgcgggacgggggtgttcgaggtgacgctgacgtgcaacaggtacacggcggatgtgtgcagagacgtcgacaaattcctcttctgggacacctaccatctcacggagagaggctacaacatcctgctctcccagataataaccaaatacggcttctgaacttcttaattctgatatagcagaatcttcagagaagaaaacgaggaaactttgatttcgtagtatcatctttcatcagtgcttcagcagcagctacagcattccaaacttcagtgctgaaatatgtggtactaatactgaagatctgatgggcatgatcctggaaaggttcattccataagctgcagtgtggcagcttaggtttcagtttgccagttaagtatcttgctgtgatgctgaaccctacactgagaaatggtgaccagaattttcatgtcaaaaatatgtggaaaatacagtttcatctttcatgtaaaggacaaacattcagcctaacaagcagcatcaagagtgggcatcacagaacctcgtaatctgttcggc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0438600, RefSeq:Os10g0438600